Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g134 ATGGTATTTATTTATTTCTTCTACAAAGAACGGGATAGCTCTGCGCAATCGGCAATGGCAGCACCAGTTAACATTATTGTGGGTTCTCATGTATGGGTTGAAGATCCAGTGTTAGCATGGATTGATGGAGAAGTGTTTCGGATTAATAGTCAAGAGGTTCATGTTCATATCACAAATGGGAAAACTGTTGTCACAAATATATCAAAAGTGTTTCCAAAGGATACTGAAGCTCCTCCTGGAGGTGTAGATGATATGACAAAGCTTTCATATTTGCATGAACCAGGAGTTCTGCAAAACTTGGCTACCAGATATGAACTTAATGAAATCTATACATACACTGGAAATATCCTGATTGCTGTAAACCCTTTTCAAAGATTACCACATCTATATGATACACACATGATGGAGCAGTATAAAGGAGCTACATTTGGAGAGCTAAGCCCTCATGTTTTTGCAGTTGCAGATGTTGCATTTAGGGCAATGATGAATGAGGGAAAGAGCAACTCAATTCTGGTAAGTGGAGAAAGTGGTGCCGGTAAGACTGAGACAACCAAGATGCTCATGAGATATCTTGCATACTTGGGTGGTCGATCTGGAGTAGAAGGAAGGACAGTTGAACAACAAGTTCTAGAATCCAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACTGTTAGGAACAACAATTCAAGTCGTTTTGGCAAATTTGTTGAGATCCAATTTGATAAAAACGGGAGGATATCTGGGGCAGCTATACGAACTTACCTGCTTGAAAGGTCTCGTGTTTGCCAAATTTCAGATCCCGAAAGAAATTACCATTGCTTTTACCTTCTTTGTGCTGCACCACCTGAGGAAAGAGAGAAGTATAAGTTGGGAAACCCTAAATCATTCCATTATTTAAATCAATCTAATTGCTATGAACTGGATGGAGTAAATGATGCTCATGAATATCATGCAACCAGAAGGGCCATGGATGTGGTTGGAATCAGTGAGGAAGAGCAGGAGGCAATTTTTAGGGTTGTAGCTGCTGTTCTTCATCTTGGTAATATTGAATTTGCAAAGGGAAAGGACATTGACTCTTCCATTATTAAGGATGAAGAGTCTAGGTTTCACCTTAACATGACAGCAGAGCTCCTTAACTGTGATGCCAAGGGCTTGGAAGATGCAATGATTAAGCGTGTAATGGTGACACCAGAAGAAGTTATTACTAGACCGCTTGATCCTGATTCTGCGTTGGGTAGCAGGGATGCCTTAGCTAAAACGATATACTCTCGCTTGTTTGATTGGCTTGTGAATAAAATTAATGATTCAATTGGGCAAGATCCAAACTCAAAATCATTAATTGGAGTTCTCGATATTTATGGTTTTGAAAGTTTTAAGTTCAATAGTTTCGAGCAGTTCTGTATTAATTTTACAAATGAAAAACTGCAACAACATTTCAATCAGCATGTCTTTAAAATGGAGCAGGAAGAGTATACGAAAGAAGAAATAAATTGGAGCTATATCGAATTTGTGGATAATCAAGACGTGTTGGATTTGATTGAGAAGAAACCTGGAGGAATTATCGCACTTCTAGATGAAGCCTGCATGTTTCCAAAGTCAACACATGAAACATTTGCTCAGAAGTTGTACCAGACATTTAAAAATAACAAGCGGTTTATCAAACCTAAGCTTTCTCGTACTAGTTTTAGCATCTCACACTATGCAGGGGAAGTAACATATCTGGCTGATCTGTTCCTTGACAAAAACAAGGACTATGTGGTGGCAGAACATCAAGATCTATTGTCAGCCTCAAAGTGCCCCTTTGTGGCAAGCCTATTTCCTCTTCTTCCAGAGGAATCATCAAAGTCATCCAAGTTTTCTTCTATTGGTTCACGTTTCAAGCTACAACTTCAATCTTTGATGGAGACCTTGAATTCAACTGAGCCTCACTATATCAGATGTGTGAAGCCAAACAATGTCCTCAAGCCTGCTATCTTTGAGAATTTGAACATAATCCAACAATTACGTTGTGGTGGTGTCCTCGAGGCAATTAGGATCAGCTGTGCTGGATATCCCACAAGGCGAACCTTCTATGAGTTTCTTCTCCGTTTTGGTGTTCTTGCTCCAGAAGTTTTGGAAGGAAACTATGATGACAAAGTTGCATGCCAAATGATTCTGGATAAAAAGGGACTGAAAGGTTATCAGGTAGGCAAGACAAAGGTCTTCTTAAGAGCTGGTCAGATGGCTGAGTTGGATGCAAGAAGAGCAGAGGTTCTTGGAAATGCAGCCAGAATCATTCAGAGGCAAATTCGTACATATATTGCACGCAAGGAGTTTATGGCATTACGCAAAGCTGCCATTCAACTGCAATCTCAATGGCGAGGTAAATTGGCTTGCAAGCTGTATGAGCAGATGCGTCGAGAAGCATCAGCAGTGAGGATTCAAAAGAATTTACGACGTTATACTGCCAGGAAATCCTATTTAACAGTATGGTCAACTGCAATCACACTGCAGACAGGCTTAAGAGCAATGACTGCTCGCAATGAATTCAGATTCAGAAAGCAAACTAAGGCGGCAATTCTTATACAGGCTCATTTGCGTTGCCACAGGGCATATTCTTATTATAAGAGCCTTCAGAAAGCTGCAATTGTTTCTCAATGTGGTTGGAGGCGAAGAGTTGCTCGGAGAGAGCTTAGGAAGCTCAAAATGGCTGCTAGAGAAACAGGGGCTCTCAAAGAGGCAAAAGACAAGCTAGAAAAGCGTGTAGAAGAACTTACATGGCGTCTGCAGTTTGAGAAACGATTAAGGACTGATTTGGAAGAGGCAAAGGCCCAAGAAATTGCTAAGTTTCAGGATGCTTTGCATGAAATGCAATTACAAGTAGAAGAAGCAAATGCTAGAGTTATCAAAGAACAAGAGGCAGCTCGAAAAGCTATTGAAGAAGCACCTCCAGTGATTAAGGAGACCCCTGTTATAGTTCAAGACACAGAAAAGATTGATTTGTTAACAGCTGAGGTTGAGAGTTTGAAGGCATTACTGCTATCAGAAAGTAAGGCAGCAGAAGAGGCTAGGAAAGCTAGTACAGATGCTGAGGCCAGGAATGCAGAACTAGTTAAAAAGCTTGAAGATGCAGATCGCAAAATGGATCAGCTTCAAGATTCTATGCAGAGGTTAGAAGAGAAGCTTTCCAATTCAGAGTCAGAGAATCAAGTACTACGTCAGCAAGCACTGGCCATGTCTCCAACTAGAAAAGCTGTATCTGCACTACCGAAGCCTACAATTGTCCAGAGGACACCAGAGAATGGAAATATTGTAAATGGAGAGATGAAGGTTGCATCGGACTTGACGCTTTCTATATCAAACCCACGTGAAACTGAATCTGAGGAAAAACCACAGAAATCTTTGAATGAAAAGCATCAGGAGAACCAGGACTTGCTGATCAGGTGTATTACACAAAACTTGGGATTCTCTGGCAGCAAACCAGTTGCTGCTTGTGTCATATACAAGTGCCTTCTTCACTGGAGATCCTTTGAAGTTGAAAGAACTAGCGTTTTTGATCGCATCATTCAAACAATTGCTTCAGCTATAGAGGTTCATGATAACAATGATGTATTAGCATATTGGCTATCTAATTCATCCACACTGTTGCTGCTTCTCCAACACACACTCAAAGCCAGTGGAGCTGCTAGCTTGACTCCTCAACGGCGGAGAGCAACATCAGCTTCTCTCTTTGGGAGGATGTCTCAAGGGTTACGCACACCTCCTCAAAGTGCTGGAATCTCATTTCTCAATGGGCGAATGCTTGGTAGACCTGATGACTTACGGCAAGTTGAGGCCAAGTATCCAGCACTATTGTTCAAACAACAGCTTACTGCATTCCTTGAGAAGATCTATGGAATGATAAGAGACAGTCTAAAGAAAGAAATTGCCCCATTGATCGGATTATGTATCCAAGCACCTAGGACATCACGGGCAAGTTTAGTAAAAGGGCGTTCTCAAGCTAATGCTGTTGCTCAACAAGCTTTGATGGCTCATTGGCAAAGCATTGTGAAAAGCCTAAACAGTTACTTGAAGACAATGAAAGCAAACTATGTACCTCCTTTCTTGGTCCGCAAAGTGTTCACACAGATCTTTTCATTCATTAATGTTCAGCTATTCAACAGTCTTCTTCTGCGACGGGAGTGCTGTTCATTCAGTAACGGGGAGTATGTAAAGTCAGGTTTGGCTGAACTAGAACAGTGGTGCTCCTATGCAACTGAGGAGTACGCAGGCTCAGCCTGGGATGAATTGAAGCATATTAGACAGGCCGTTGAATTTCTGGTCATACATCAAAAGCCCAAAAAGACCTTGAATGAAATAATGAAAGAACTTTGCCCTGTGCTCAGCATACAACAATTATACAGGATCAGTACAATGTACTGGGATGACAAATATGGCACACACAGTGTGTCTTCAGAAGTTATTTCAAGTATGAGAATTATGATGACCGAGGCCTCCAACAATTCTGTTAGCAGTTCTTTCCTATTGGACGACGACTCAAGCATCCCTTTCACTGTGGATGACATCTCCAAGTCAATGAAACAAGTTGACACTGACGTCGATCCTCCATCATTAATTCGCGAAAACTCCGGTTTTGTGTTCTTACTCCAACGGTCAGAGTGA 4644 41.28 MVFIYFFYKERDSSAQSAMAAPVNIIVGSHVWVEDPVLAWIDGEVFRINSQEVHVHITNGKTVVTNISKVFPKDTEAPPGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGATFGELSPHVFAVADVAFRAMMNEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPPEEREKYKLGNPKSFHYLNQSNCYELDGVNDAHEYHATRRAMDVVGISEEEQEAIFRVVAAVLHLGNIEFAKGKDIDSSIIKDEESRFHLNMTAELLNCDAKGLEDAMIKRVMVTPEEVITRPLDPDSALGSRDALAKTIYSRLFDWLVNKINDSIGQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFSISHYAGEVTYLADLFLDKNKDYVVAEHQDLLSASKCPFVASLFPLLPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENLNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEVLEGNYDDKVACQMILDKKGLKGYQVGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIARKEFMALRKAAIQLQSQWRGKLACKLYEQMRREASAVRIQKNLRRYTARKSYLTVWSTAITLQTGLRAMTARNEFRFRKQTKAAILIQAHLRCHRAYSYYKSLQKAAIVSQCGWRRRVARRELRKLKMAARETGALKEAKDKLEKRVEELTWRLQFEKRLRTDLEEAKAQEIAKFQDALHEMQLQVEEANARVIKEQEAARKAIEEAPPVIKETPVIVQDTEKIDLLTAEVESLKALLLSESKAAEEARKASTDAEARNAELVKKLEDADRKMDQLQDSMQRLEEKLSNSESENQVLRQQALAMSPTRKAVSALPKPTIVQRTPENGNIVNGEMKVASDLTLSISNPRETESEEKPQKSLNEKHQENQDLLIRCITQNLGFSGSKPVAACVIYKCLLHWRSFEVERTSVFDRIIQTIASAIEVHDNNDVLAYWLSNSSTLLLLLQHTLKASGAASLTPQRRRATSASLFGRMSQGLRTPPQSAGISFLNGRMLGRPDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDSLKKEIAPLIGLCIQAPRTSRASLVKGRSQANAVAQQALMAHWQSIVKSLNSYLKTMKANYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKSGLAELEQWCSYATEEYAGSAWDELKHIRQAVEFLVIHQKPKKTLNEIMKELCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRIMMTEASNNSVSSSFLLDDDSSIPFTVDDISKSMKQVDTDVDPPSLIRENSGFVFLLQRSE* 1548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1354857 1372900 - Vvi11g134 Vvi11g134 771575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g134 1547 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 804 901 IPR027417 -
Vvi11g134 1547 ProSiteProfiles IQ motif profile. 755 782 IPR000048 GO:0005515
Vvi11g134 1547 Gene3D - 457 641 - -
Vvi11g134 1547 SMART iq_5 871 893 IPR000048 GO:0005515
Vvi11g134 1547 SMART iq_5 752 774 IPR000048 GO:0005515
Vvi11g134 1547 SMART iq_5 800 822 IPR000048 GO:0005515
Vvi11g134 1547 SMART iq_5 775 797 IPR000048 GO:0005515
Vvi11g134 1547 SMART iq_5 848 870 IPR000048 GO:0005515
Vvi11g134 1547 Pfam Myosin head (motor domain) 82 738 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi11g134 1547 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 803 IPR027417 -
Vvi11g134 1547 Gene3D Kinesin motor domain 83 680 IPR036961 -
Vvi11g134 1547 Pfam Myosin N-terminal SH3-like domain 27 69 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vvi11g134 1547 Gene3D - 753 802 - -
Vvi11g134 1547 Gene3D - 803 850 - -
Vvi11g134 1547 Gene3D - 851 900 - -
Vvi11g134 1547 MobiDBLite consensus disorder prediction 1112 1132 - -
Vvi11g134 1547 CDD MYSc_Myo11 94 738 IPR036018 -
Vvi11g134 1547 ProSiteProfiles Myosin motor domain profile. 80 750 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi11g134 1547 ProSiteProfiles Dilute domain profile. 1180 1491 IPR002710 -
Vvi11g134 1547 PANTHER MYOSIN 24 1544 - -
Vvi11g134 1547 ProSiteProfiles IQ motif profile. 776 805 IPR000048 GO:0005515
Vvi11g134 1547 ProSiteProfiles IQ motif profile. 801 830 IPR000048 GO:0005515
Vvi11g134 1547 PRINTS Myosin heavy chain signature 110 129 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi11g134 1547 PRINTS Myosin heavy chain signature 167 192 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi11g134 1547 PRINTS Myosin heavy chain signature 214 241 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi11g134 1547 PRINTS Myosin heavy chain signature 447 475 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi11g134 1547 PRINTS Myosin heavy chain signature 500 528 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi11g134 1547 Gene3D Myosin VI head, motor domain, U50 subdomain 330 619 - -
Vvi11g134 1547 PANTHER MYOSIN-5 24 1544 - -
Vvi11g134 1547 ProSiteProfiles IQ motif profile. 872 901 IPR000048 GO:0005515
Vvi11g134 1547 Pfam DIL domain 1367 1470 IPR002710 -
Vvi11g134 1547 Coils Coil 941 975 - -
Vvi11g134 1547 SMART MYSc_2a 74 751 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi11g134 1547 CDD MyosinXI_CBD 1131 1514 IPR037975 GO:0007015
Vvi11g134 1547 ProSiteProfiles IQ motif profile. 826 853 IPR000048 GO:0005515
Vvi11g134 1547 SMART DIL_2 1366 1473 IPR002710 -
Vvi11g134 1547 Gene3D - 685 748 - -
Vvi11g134 1547 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 26 75 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vvi11g134 1547 Coils Coil 1014 1069 - -
Vvi11g134 1547 MobiDBLite consensus disorder prediction 1117 1132 - -
Vvi11g134 1547 Coils Coil 895 929 - -
Vvi11g134 1547 ProSiteProfiles IQ motif profile. 849 875 IPR000048 GO:0005515
Vvi11g134 1547 Pfam IQ calmodulin-binding motif 777 792 IPR000048 GO:0005515
Vvi11g134 1547 Pfam IQ calmodulin-binding motif 755 773 IPR000048 GO:0005515
Vvi11g134 1547 Pfam IQ calmodulin-binding motif 850 870 IPR000048 GO:0005515
Vvi11g134 1547 Pfam IQ calmodulin-binding motif 803 821 IPR000048 GO:0005515
Vvi11g134 1547 Gene3D - 270 328 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g134 K10357 - vvi:100243893 2925.96