Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g145 | ATGACAGCTGAGAAGTCAACGCTGATATCTGTGGCGGCGATGACGTCAGTCGCCGTGGCCGTTAACGGCGGCCCCGGCAGCAGAGGCAACGGAAGCCGCCGGGCCGTTCGTTGGGCGGTGGAGAATCTTTCGGCTGATGCCGATACGTTAATCTTAATTCACGTCATGCCGGCAATCACTTCAATCCCAACTCCATCAGGAGAGCAAATACCCATCAATGAATTGGACGCAAATGTGGTGGAATTGTATGTCCAGGACATGAGAGCCAAGTTTGAACAAATCTTTCTCCCATTTAAGAAACTATGCAAAACTCTAAATGTAGAAACTTTGGTGCTGGAAGGTAAAAATCCTGCAACAGTGCTTCTAAGATACGCCTCTGAGTCAGGGATTAAAAGCTTGGTTTTGGGCTCTTGCTTTTCAAACTGCATTTTGAGGAAGCTAAGGGGACCAGGTGTACCATCAACTGTCCTAAGATATGCTCCTGACACTTGCGATGTTTATGTTATATCTAGACGCAGACTTAGAAAAAAATCAACCAATCCCTCATCCTTCAGCAAGACGAGCTCTAGACACTGGTTTGTCACTCGAAGAAAACTTACTGAGGGTCCCAATGGTATTAATGAACAAATATCTGGTTTTTCCACTTTGGGGTCCAAAGTTCGTAAAATCTTTGGAGCTTCTTCATTATCCGAACTTAGTTTCTCAAGTTCTCAAGCATTTACACATCAGGGTTCTACAAATGCTAGTATAGATCAGGAAAGTTATCATCAAAACCTGGGAGATAATAATCAGGAGACTCTTACAGTTAAAAGTTGCAATTCCATGGCTTCTACCAAAAGTGAGCAGGCTGAAGTAGAAAAATTGCGGCTAGAATTACAAGATGCTGTTTCCATGTATGAAAGAGCATGTGAAGAGCTGGTCCATACCCAAAGCAAGGTCCAAATACTTTCTTCTGAATGCATTGAAGAAAGAAGAAAAGTGAATGCTGCCCTGGAAAGAGAAGGAACTTTCAGGAAAATTGCTTCAGAAGAGAAAGCAAAGCATTTGGAAACAATGGAGGAGGTTGAGGTGGCAAAAAACTTGCTTGCTATAGAGGTCAATGGTAGGCAGATAGCCGAACTACATGCTCTGAAAGAGTCCTCAGAAAAACAGAAAATCGTTGATGAACTCTTCTCAAGCGACAAGAGGTACAGAAAGTACACAAAGGATGAAATAGAGGTAGCAACAGATTTTTTCTCTGAGAGCAGGGTGATTGGCGAAGGAGGGTATGGGAAGGTCTACAAGGGTAACCTTGATCATACCCCAGTAGCTGTCAAGGTTATTCATTCTGATGCATGTGACAGGAAAGAGGAGTTCCTAAGAGAGGTTGAAGTCCTTAGCCACCTACGCCATCCACACATGGTTTTGCTTCTAGGAGCCTGTCCTGAGAGTGGTTGTCTGGTTTATGAATACATGGAAAATGGAAGCCTGGACAAACATATTTTCCGCCAAGACGGAAGGATGCCTCTTCCTTGGTTTGTTCGGTTCCAAATTATCTTTGAGGTGGCTTGCGGGCTTGCATTCTTACACAGCTCAAAGCCAGAGCCTATTGTTCATCGTGATCTAAAACCGGGTAATATCTTGTTAGACAGAAACTATGTGAGCAAAATTGGAGATGTTGGGCTGGCTAAGCTCATTTCAGATGCCGTGCCTGACAACATCACAGAGTACAGAGACTCCATTCTAGCTGGTACACTCTTCTACATGGATCCTGAGTATCAGAGAACTGGCACCATTCGACCCAAATCAGATGTATACGCTTTTGGTGTCATAATCCTCCAATTATTGGCAGCTCGCCATCCAAATGGCCTTATATTGACAGTTGAAAATGCCATTACTAACGGTACTTTTGCAGACACGTTGGATAAGTCAATTGCAGATTGGCCAATTGCTGAAACAGAAGAACTAGCTTGTCTTGCACTAAAATGTTCCAAACTCAGATGCCGGGATAGGCCAGATCTTGAGACTGAAGTTCTGCCTGTTCTCAAAAGACTTGCAGATTTTGCAGATGCTAGTAAAAGGGTAGAAATAAACAATACTTCCGCGCCCAAGCACTACTTCTGTCCAATCCTTCAGGAAGTAATGGAGGATCCACACATTGCAGCTGATGGTTTTACATACGAGCATCGAGCGATCAAGGCATGGCTCGATAGACACGATGTTTCACCAGTGACAAAGTGGACGTTCCAGCACAAAATGCTAACTCCAAACCAGACATTACGTTCTGCAATACAAGAATGGAGGTGTCGTGTAGAATCATCCAGTAACTGA | 2310 | 43.85 | MTAEKSTLISVAAMTSVAVAVNGGPGSRGNGSRRAVRWAVENLSADADTLILIHVMPAITSIPTPSGEQIPINELDANVVELYVQDMRAKFEQIFLPFKKLCKTLNVETLVLEGKNPATVLLRYASESGIKSLVLGSCFSNCILRKLRGPGVPSTVLRYAPDTCDVYVISRRRLRKKSTNPSSFSKTSSRHWFVTRRKLTEGPNGINEQISGFSTLGSKVRKIFGASSLSELSFSSSQAFTHQGSTNASIDQESYHQNLGDNNQETLTVKSCNSMASTKSEQAEVEKLRLELQDAVSMYERACEELVHTQSKVQILSSECIEERRKVNAALEREGTFRKIASEEKAKHLETMEEVEVAKNLLAIEVNGRQIAELHALKESSEKQKIVDELFSSDKRYRKYTKDEIEVATDFFSESRVIGEGGYGKVYKGNLDHTPVAVKVIHSDACDRKEEFLREVEVLSHLRHPHMVLLLGACPESGCLVYEYMENGSLDKHIFRQDGRMPLPWFVRFQIIFEVACGLAFLHSSKPEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAVPDNITEYRDSILAGTLFYMDPEYQRTGTIRPKSDVYAFGVIILQLLAARHPNGLILTVENAITNGTFADTLDKSIADWPIAETEELACLALKCSKLRCRDRPDLETEVLPVLKRLADFADASKRVEINNTSAPKHYFCPILQEVMEDPHIAADGFTYEHRAIKAWLDRHDVSPVTKWTFQHKMLTPNQTLRSAIQEWRCRVESSSN* | 770 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1470781 | 1476384 | - | Vvi11g145 | Vvi11g145 | 771586 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g145 | 769 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 14 | 170 | - | - | |
Vvi11g145 | 769 | CDD | STK_N | 16 | 171 | - | - | |
Vvi11g145 | 769 | Gene3D | Phosphorylase Kinase; domain 1 | 391 | 484 | - | - | |
Vvi11g145 | 769 | SMART | Ubox_2 | 698 | 760 | IPR003613 | GO:0004842|GO:0016567 | |
Vvi11g145 | 769 | PANTHER | OS02G0152300 PROTEIN | 15 | 763 | - | - | |
Vvi11g145 | 769 | CDD | RING-Ubox_WDSUB1_like | 699 | 739 | - | - | |
Vvi11g145 | 769 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 34 | 15 | 763 | - | - | |
Vvi11g145 | 769 | ProSiteProfiles | Protein kinase domain profile. | 412 | 701 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g145 | 769 | SUPERFAMILY | RING/U-box | 687 | 763 | - | - | |
Vvi11g145 | 769 | Pfam | U-box domain | 695 | 762 | IPR003613 | GO:0004842|GO:0016567 | |
Vvi11g145 | 769 | Coils | Coil | 285 | 305 | - | - | |
Vvi11g145 | 769 | ProSiteProfiles | U-box domain profile. | 694 | 767 | IPR003613 | GO:0004842|GO:0016567 | |
Vvi11g145 | 769 | SUPERFAMILY | Protein kinase-like (PK-like) | 395 | 668 | IPR011009 | - | |
Vvi11g145 | 769 | SMART | serkin_6 | 412 | 675 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g145 | 769 | Pfam | Universal stress protein family | 31 | 161 | IPR006016 | - | |
Vvi11g145 | 769 | Pfam | Protein tyrosine and serine/threonine kinase | 415 | 668 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi11g145 | 769 | Gene3D | HUPs | 12 | 180 | IPR014729 | - | |
Vvi11g145 | 769 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 530 | 542 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi11g145 | 769 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 696 | 767 | IPR013083 | - | |
Vvi11g145 | 769 | ProSitePatterns | Protein kinases ATP-binding region signature. | 418 | 439 | IPR017441 | GO:0005524 | |
Vvi11g145 | 769 | Gene3D | Transferase(Phosphotransferase) domain 1 | 485 | 695 | - | - |
Event-related genes

Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76037 | PF07714 | PK_Tyr_Ser-Thr | 1.10E-40 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g145 | - | - | vvi:100242304 | 1500.72 |