Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g199 ATGATCGATCGGGCGCTGGAGAAGGAGTTCACGGAAAATGAACAAACCGGAGCCAGTGATGCTGGTAGCTTCAACAACAGTGTTGCGGAACAGCAGGCAGTTTTGGAAACTGTTGCTAGAGTTAGGCCCAAGAAAAACGACACGAAGGAGGAGAAGTCATTTCAGCTTCACAATGTTTTCAATTTGGATAATGAGAACAGACAAGAAGATACACCAACATTGATAGATCGAAAGGACAATGTTTTTATTATGTCCAATCCCAAGTCAAAGTACCCTGTGCTACAGTTAGACTTGAGATTGATATCAGATTTGGTTGTTGTCATTGTTTCTGCAACTTGTGGCGGCATCGCCTTTGCTTGTGCTGGACAGCCGGTTATTACTGGATATCTACTGGCAGGATCTGTTATTGGACCTGGAGGTTTAAGTTTTGTTAGTGAAATGGTGCAAGTTGAAACGGTAGCTCAGTTTGGTGTGATTTTTCTTCTTTTTGCATTAGGCTTGGAGTTCTCCACGACAAAGCTTCGTGTCGTTCGGGCAGTTGCTGTTTTAGGAGGTCTGCTCCAGATTTTCTTATTTATGTGCTTGTGTGGAATCACTGCCTCGCTATGTGGTGGCAAACCTTCTGAGGGGGTATTTGTTGGTGTATTACTTTCCATGTCTTCGACAGCAGTGGTTTTGAAATTTTTGATGGAAAGAAATAGTATCAGTGCTCTTCACGGTCAGGTTACAGTTGGCACTCTTATTCTGCAGGATTGTGCTGTGGGCTTGCTATTTGCTCTTCTTCCAGTCCTAGGTGGTACTTCGGGTATTCTTCAAGGAGTAATATCAATGACAAAATCGTTGGTGGTTTTGATAACTTTTTTGGCCATTTTGTCAATACTATCTCGTACTTGTGTCCCTTGGTTCCTTAAGCTGATGGTTAGCCTATCATCACAGACTAATGAACTTTATCAATTGGCTTCAGTGGCATTCTGCTTACTCGTTGCTTGGTGTAGTGATAAGCTGGGTCTAAGCCTTGAACTTGGTTCCTTTGCTGCTGGAGTGATGATATCAACAACTGATCTTGCTCAACACACTCTTGAACAAGTTGAGCCTATCCGCAACTTCTTTGCCGCTCTTTTTCTCGCCAGCATTGGGATGTTGATACATGTTCATTTCCTTTGGAATCACGTTGATATTTTACTCGCAGCTGTTATATTGGTGATCATTATAAAAACTATTGTGGTTTCTACAGTGGTCAAGGGATTTGGATACAACAATAAGACTTCACTTCTTGTTGGAATGTCTCTGGCACAAATTGGGGAGTTTGCTTTTGTTCTTCTAAGCCGTGCTTCTAATCTTCATCTAGTTGAGGGCAAATTGTACTTACTGCTTCTCGGCACTACTGCTCTCAGTCTGGTCACAACACCATTGCTTTTCAAGCTGATTCCTGCTGTTGTACATCTTGGGGTACTGTTGCGGTGGTTCTCTCCTGATGTTCCAAGTGAGATTGGATTTAAAGGAGATAGCTTTCGAGCAGACAGTGCTAAGCGTATTACTTTGATGGTCCAAGGCTCTCATGATTCATGA 1569 42.64 MIDRALEKEFTENEQTGASDAGSFNNSVAEQQAVLETVARVRPKKNDTKEEKSFQLHNVFNLDNENRQEDTPTLIDRKDNVFIMSNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVITGYLLAGSVIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFMCLCGITASLCGGKPSEGVFVGVLLSMSSTAVVLKFLMERNSISALHGQVTVGTLILQDCAVGLLFALLPVLGGTSGILQGVISMTKSLVVLITFLAILSILSRTCVPWFLKLMVSLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHVDILLAAVILVIIIKTIVVSTVVKGFGYNNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGVLLRWFSPDVPSEIGFKGDSFRADSAKRITLMVQGSHDS* 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1922069 1943368 + Vvi11g199 Vvi11g199 771640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g199 522 Pfam Sodium/hydrogen exchanger family 105 474 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vvi11g199 522 Gene3D - 98 481 IPR038770 -
Vvi11g199 522 PANTHER K(+) EFFLUX ANTIPORTER 6 1 522 - -
Vvi11g199 522 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 1 522 IPR045158 GO:0015386|GO:0071805|GO:1902600
Vvi11g199 522 MobiDBLite consensus disorder prediction 1 26 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g199 - - vvi:100252607 942.569