Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g218 ATGCTGCAGTATATTCTGGATACAAGTGTGTATCCTAGAGAACCAGAGCCCCTAAAGGAGCTCAGGCATGCTATGAAGGACCACCCTATGTCCTTCTTGGCTACTTCCCCTGATTCTGGCCAGTTTATGGCCTTGATATTGAGACTAATGAATGGCAAAAAGACTATAGAAATTGGAGTTTTCACCGGTTACTCCCTTCTACTTACTACTCTCTCAATTCCTGATGATGGCAAGATTACTGCCATAGATATGGATCGGAAAGCATATGAAATAAGCTCTTGGAAGATTGTTATTTTTCGGGTTTTTTTGTTTTTGTTTTCTTATGTTGATGCTGACAGGCCTAGTTTTCCTGGTTATCATGAGAGGCTGCTCAATTTGTTGAAGGTTGGAGGGGTAATTATGTACGATAACACACTCTGGGGAGGAACAGTGGCTTTGCCTGATCCATCTCTGGCTCCACAAGGCCGAAAATCTTGCTGGAAGGATTGCATTGAATTCAACAAAATATTGGCAACTGATACTCGCATCAAAATATCTCAAGCTCCATTAGGCGATGGTGTCACCATCTGCAGGCGCTTATACTGA 585 42.56 MLQYILDTSVYPREPEPLKELRHAMKDHPMSFLATSPDSGQFMALILRLMNGKKTIEIGVFTGYSLLLTTLSIPDDGKITAIDMDRKAYEISSWKIVIFRVFLFLFSYVDADRPSFPGYHERLLNLLKVGGVIMYDNTLWGGTVALPDPSLAPQGRKSCWKDCIEFNKILATDTRIKISQAPLGDGVTICRRLY* 195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2075003 2075934 + Vvi11g218 Vvi11g218 771659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g218 194 PANTHER O-METHYLTRANSFERASE-RELATED 104 193 - -
Vvi11g218 194 PANTHER O-METHYLTRANSFERASE-RELATED 2 92 - -
Vvi11g218 194 Gene3D Vaccinia Virus protein VP39 102 193 IPR029063 -
Vvi11g218 194 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 104 193 - -
Vvi11g218 194 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 2 92 - -
Vvi11g218 194 Gene3D Vaccinia Virus protein VP39 1 96 IPR029063 -
Vvi11g218 194 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 193 IPR002935 GO:0008171
Vvi11g218 194 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 192 IPR029063 -
Vvi11g218 194 Pfam O-methyltransferase 104 193 IPR002935 GO:0008171
Vvi11g218 194 Pfam O-methyltransferase 8 92 IPR002935 GO:0008171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g218 K00588 - egr:104438179 234.572