Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g220 ATGGAACAGTCTGGAAAGAAAAATCCTTCCAAGGGTCTCTTGCAGAGTGAGGAGCTGTATCAGTATCTTCTGGAGACTAGCGTGTACCCCCGTGAACCCGAGCCTCTCAAGGAGCTCAGAGATATTACTGCAACTCATCCAAAAGCCGTGATGGCCACTGCCCCAGATGCAGGTCAGTTAATGGACATGCTCTTGAGGCTGGTTAATGCAAAAAAGACGATTGAAATTGGAGTTTTCACTGGTTACTCTCTTCTCCTCACTGCTCTTTCCATTCCTGATGATGGCAAGATCACAGCCATTGATGTAGATCGACAGGCATATGAGATGGGGTTGCCGGTTATTAGAAAAGCTGGTGTTGAACACAAAATCAACTTCATTGAGTCACAAGCTCTACCAGTTCTTGATAAACTCTTAGAAGAACATGAAAATGAAGGGATCTTTGACTTTGCCTTTGTTGATGCTGACAAAGTTAACTATAAAAACTACCATGAGAGGCTGATGAAACTGTTGAAGATGGGCGGGATAGTTGTGTACGATAATACTCTTCGAGGTGGAACAGTTGCAATGCCCGAAGAGTTAGTTGCAGAGAATCTGAGAGAGAATAGGCGGTTGACCATCGAGCTTAACAATTTTCTAGCAGCTGATCCTCGCGTTCAAATTTGCCTTGCTCCATTGGGCGATGGCATCACAATCTGCAGGCGGGTCTGCTGA 711 45.15 MEQSGKKNPSKGLLQSEELYQYLLETSVYPREPEPLKELRDITATHPKAVMATAPDAGQLMDMLLRLVNAKKTIEIGVFTGYSLLLTALSIPDDGKITAIDVDRQAYEMGLPVIRKAGVEHKINFIESQALPVLDKLLEEHENEGIFDFAFVDADKVNYKNYHERLMKLLKMGGIVVYDNTLRGGTVAMPEELVAENLRENRRLTIELNNFLAADPRVQICLAPLGDGITICRRVC* 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2085586 2087072 + Vvi11g220 Vvi11g220 771661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g220 236 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 12 235 IPR002935 GO:0008171
Vvi11g220 236 Pfam O-methyltransferase 25 235 IPR002935 GO:0008171
Vvi11g220 236 PANTHER O-METHYLTRANSFERASE-RELATED 8 236 - -
Vvi11g220 236 PANTHER METHYLTRANSFERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 8 236 - -
Vvi11g220 236 Gene3D Vaccinia Virus protein VP39 4 236 IPR029063 -
Vvi11g220 236 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 234 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g220 K00588 - vvi:100268094 464.151