Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g23 | ATGGGAATTCCCAAACAGCAGCCGCAGCAGCAGTACACGGTGGAGCAACTACTCGCTCTCAATCCCTACAATCCCGATATCCTTCCCGATCTTGAAAACTTCGTCAACGAGCAGGTGTCTTCACAAACATACTCCTTGGATGCAAATCTTTGCCTTCTTCGCCTCTACCAATTTGAGCCAGAGCGAATGAGTACCCAAATCGTTGCTCGGATTTTGGTGAAGGCCCTTATGGCAATGCCAGCTCCAGATTTCAGCCTTTGTCTCTTTTTAATTCCAGAACGAGTGCAAATGGAGGAACAGTTCAAGACTTTGATTGTTCTCTCACATTATTTGGAGACAGCAAGGTTCCGTCAGTTCTGGGATGAAGCGGCTAAGAATCGACACATAGTTGAAGTTGTTCCAGGTTTTGAGCAAGCAATCCAAGCCTATGCCATTCACGTTCTTTCCTTGACTTATCAAAAGGTTCCTAGGACTGTACTTGCTGAGGCTATCAACATTGAAGGTCTATCTCTAGATAAATTCCTAGAGCATCAGGTAGCTAACTGTGGTTGGGTTCTTGAGAAGAGTCAAGGCAAGGGCCAACTTATTGTCTTGCCTCCTAACGAGTTCAACCATCCTGAACTGAAGAAAAACGCTGCAGATAGTATTCCTCTAGAGCATATCACCCGAATCTTCCCCATTCTCGGCTGA | 690 | 45.65 | MGIPKQQPQQQYTVEQLLALNPYNPDILPDLENFVNEQVSSQTYSLDANLCLLRLYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETARFRQFWDEAAKNRHIVEVVPGFEQAIQAYAIHVLSLTYQKVPRTVLAEAINIEGLSLDKFLEHQVANCGWVLEKSQGKGQLIVLPPNEFNHPELKKNAADSIPLEHITRIFPILG* | 230 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 443151 | 447398 | - | Vvi11g23 | Vvi11g23 | 771464 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g23 | 229 | Gene3D | - | 125 | 227 | IPR036388 | - | |
Vvi11g23 | 229 | ProSiteProfiles | PCI domain profile. | 44 | 202 | IPR000717 | - | |
Vvi11g23 | 229 | Gene3D | ARM repeat; domain 1 | 5 | 122 | IPR016020 | GO:0003743|GO:0005852|GO:0006446|GO:0043022 | |
Vvi11g23 | 229 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K | 4 | 229 | - | - | |
Vvi11g23 | 229 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 | 4 | 229 | IPR009374 | GO:0003743|GO:0005737|GO:0005852 | |
Vvi11g23 | 229 | SUPERFAMILY | ARM repeat | 7 | 132 | IPR016024 | - | |
Vvi11g23 | 229 | Hamap | Eukaryotic translation initiation factor 3 subunit K [EIF3K]. | 5 | 229 | IPR009374 | GO:0003743|GO:0005737|GO:0005852 | |
Vvi11g23 | 229 | Pfam | CSN8/PSMD8/EIF3K family | 64 | 190 | IPR033464 | - | |
Vvi11g23 | 229 | SUPERFAMILY | Winged helix DNA-binding domain | 134 | 226 | IPR036390 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g23 | K15028 | - | vvi:100259495 | 459.144 |