Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g246 | ATGAAGATCGAAGATTTGGATGATGTTGAATCTGATGGGAAGGAGAGTGTTTATAGAAGGCAGGTTGTTAAGGTTGATGCCAAGATGGCTTTGGTCGGGGCGGGGGCTCGGATCCTCTTCTACCCGACTCTTCTGTATAATGTGTTTCGGAACAAGATTCAGGCGGAGTTCAGATGGTGGGATGAAGTTGATCAGTTCCTTCTGCTTGGTGCGGTTCCATTTCCCAAGGATGTCCCACGGCTGAAGCAGCTTGGTGTAGGTGGCGTAATTACTTTAAATGAACCTTATGAAACTTTGGTTCCCACGTCCTTGTATCATGCTCATGAGATAGACCACCTGGTAATTCCCACAAGAGATTACCTTTTTGCTCCTTCATTTGTGGATATTAGCCGTGCTGTAGATTTCATTCATAAGAATGCATCTTCCGGTAGAACTACTTATGTTCATTGTAAAGCTGGACGAGGAAGGAGCACAACTATTGTGCTTTGCTATTTGGTTGAGTATAAGCACATGACACCTGCTGCTGCCCTGGAATATGTTCGTTCTAGAAGACCACGTGTGCTATTAGCTCCCTCACAGTGGAAGGCTGTTCAAGAATATAACAAGCGCCAATTAGCAACTACTACATCATATTCTCCATCTGGAGATGCAGTGCTGATAACAAAAGCAGATCTAGAAGGTTATCAAAGCAATTGTGATGATGCTGGCAAGGAGCTGGCAATTATTGCCCGAGTGGTGAGGGCTAGACCCATGGCAAGGCTGTCCTGCCTGTTTGCATCCTTGAAATTTTCTGGTGGCTGCGGACCTGTTTCTAGGCAGCTGTCTGAGGCACGTGCTTGTTAA | 843 | 45.79 | MKIEDLDDVESDGKESVYRRQVVKVDAKMALVGAGARILFYPTLLYNVFRNKIQAEFRWWDEVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPTSLYHAHEIDHLVIPTRDYLFAPSFVDISRAVDFIHKNASSGRTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALEYVRSRRPRVLLAPSQWKAVQEYNKRQLATTTSYSPSGDAVLITKADLEGYQSNCDDAGKELAIIARVVRARPMARLSCLFASLKFSGGCGPVSRQLSEARAC* | 281 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2331687 | 2335681 | - | Vvi11g246 | Vvi11g246 | 771687 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g246 | 280 | CDD | PTPMT1 | 59 | 203 | IPR044596 | GO:0004721 | |
Vvi11g246 | 280 | Gene3D | Protein tyrosine phosphatase superfamily | 59 | 207 | IPR029021 | - | |
Vvi11g246 | 280 | SMART | dsp_5 | 62 | 203 | IPR020422 | GO:0006470|GO:0008138 | |
Vvi11g246 | 280 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 148 | 158 | IPR016130 | GO:0016311|GO:0016791 | |
Vvi11g246 | 280 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 59 | 206 | IPR020422 | GO:0006470|GO:0008138 | |
Vvi11g246 | 280 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 52 | 202 | IPR029021 | - | |
Vvi11g246 | 280 | Pfam | Dual specificity phosphatase, catalytic domain | 82 | 202 | IPR000340 | GO:0008138|GO:0016311 | |
Vvi11g246 | 280 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 127 | 195 | IPR000387 | GO:0016311|GO:0016791 | |
Vvi11g246 | 280 | PANTHER | - | 2 | 280 | - | - | |
Vvi11g246 | 280 | PANTHER | OS01G0739200 PROTEIN | 2 | 280 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g246 | - | - | vvi:100255975 | 563.148 |