Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g251 ATGTCGTGGCAGACATACGTAGATGACCATCTGATGTGCGAAATCGACGGCCAAGGCCAGCACCTCACCGCCGCTGCCATCGTCGGCCACGACGGCAGCGTCTGGGCGCAGAGCACTTCTTTCCCAGAGTTCAAGACTCCAGAGATCACTGGTATCATGAATGATTTTGCAGAACCAGGTCACCTAGCCCCTACTGGCTTATACCTCGGGGGTACAAAGTATATGGTTATTCAGGGAGAGCCTGGGGCTGTCATCCGTGGAAAGAAGGGATCAGGCGGCATCACTATAAAGAAGACTGGTCAGGCACTGGTTTTTGGCATCTATGAGGAACCTGTGACTCCAGGACAATGCAACATGGTTGTTGAAAGGTTGGGGGATTACCTGGTTGATCAGGGCCTGTAG 402 52.99 MSWQTYVDDHLMCEIDGQGQHLTAAAIVGHDGSVWAQSTSFPEFKTPEITGIMNDFAEPGHLAPTGLYLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL* 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2360967 2364383 + Vvi11g251 Vvi11g251 771692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g251 133 Pfam Profilin 1 132 IPR005455 GO:0003779
Vvi11g251 133 PANTHER PROFILIN 1 133 IPR005455 GO:0003779
Vvi11g251 133 SUPERFAMILY Profilin (actin-binding protein) 2 132 IPR036140 -
Vvi11g251 133 Gene3D Dynein light chain 2a, cytoplasmic 1 133 - -
Vvi11g251 133 PANTHER PROFILIN 1 133 - -
Vvi11g251 133 SMART prof_2 1 133 IPR005455 GO:0003779
Vvi11g251 133 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Vvi11g251 133 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Vvi11g251 133 PRINTS Profilin signature 23 32 IPR005455 GO:0003779
Vvi11g251 133 PRINTS Profilin signature 42 62 IPR005455 GO:0003779
Vvi11g251 133 PRINTS Profilin signature 66 80 IPR005455 GO:0003779
Vvi11g251 133 PRINTS Profilin signature 102 115 IPR005455 GO:0003779
Vvi11g251 133 PRINTS Profilin signature 115 132 IPR005455 GO:0003779
Vvi11g251 133 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Vvi11g251 133 PRINTS Plant profilin signature 29 42 IPR005455 GO:0003779
Vvi11g251 133 PRINTS Plant profilin signature 54 68 IPR005455 GO:0003779
Vvi11g251 133 PRINTS Plant profilin signature 73 82 IPR005455 GO:0003779
Vvi11g251 133 PRINTS Plant profilin signature 86 101 IPR005455 GO:0003779
Vvi11g251 133 PRINTS Plant profilin signature 106 119 IPR005455 GO:0003779
Vvi11g251 133 PRINTS Plant profilin signature 119 132 IPR005455 GO:0003779
Vvi11g251 133 CDD PROF 2 132 IPR005455 GO:0003779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g251 K05759 - vvi:100268013 269.24