Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g259 ATGTTTAAGGCAGCCAAGAATAAGCTCTTCCCCTCTTACGCAATCACTGTGAATAAGAATTCCGCGGCCGGAGACTTTAGGTCTATTCAGGATGCTATTGATTCTCTGCCTTCCATCAATCTAGTGAGAGTTGTTATCAAGGTCCATGCGGGAGTTTACACGGAGAAGGTTAATATCCCCGCATTCAAATCCTTCATAACCATAGAAGGAGCAGGAGCAGATAAAACAGTTGTTCAATGGGGAGATACTGCTCGGACAATTGGGGAAAAAGGACAGCCTATTGGCACCTTCAATTCTGCAACTTTTGCTGTGAATTCCCTTTATTTCATTGCCAAGAACATCACATTCAAGAACACTACACCAGTTCCAGCTCCGGGAGCTGTAGGAAAGCAAGCGGTGGCATTTAGAATATCAGGAGACACAGCAGCTTTCTTGGGGTGTAAATTCTTGGGAGCTCAGGACACACTATATGACCATCTGGGTAGGCATTATTACAAAGATTGCTACATTGAAGGCTCTGTGGATTTCATCTTTGGAAACGCCCTCTCCCTATTTGAGGGATGTCACGTGCATGCCATAGCACAAAATACAGGGGCCCTTACAGCACAAGGCCGGAGTAGTCTCCTAGAAGACACGGGATTCTCATTTGTGAACTGTAAGGTCACGGGCTCAGGAGCTCTGTTCCTTGGGAGGGCATGGGGTCCCTTCTCCAGGGTGGTCTTTGCCTACACTTATATGGACGATATTATCATTCCCAAAGGCTGGTATAACTGGGGTGACCCCAGCCGGGAAATGACTGTGTTTTATGGGCAATACAAATGCACAGGGCCAGGAGCAGCCTTTGCAGGAAGAGTGTCATGGTCAAGAGAGCTCACTGATCAGGAAGCCAAGCCTTTTATTTCACTTAGCTACATTGATGGGTCTGAATGGATCAAAATGTAA 942 46.5 MFKAAKNKLFPSYAITVNKNSAAGDFRSIQDAIDSLPSINLVRVVIKVHAGVYTEKVNIPAFKSFITIEGAGADKTVVQWGDTARTIGEKGQPIGTFNSATFAVNSLYFIAKNITFKNTTPVPAPGAVGKQAVAFRISGDTAAFLGCKFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQNTGALTAQGRSSLLEDTGFSFVNCKVTGSGALFLGRAWGPFSRVVFAYTYMDDIIIPKGWYNWGDPSREMTVFYGQYKCTGPGAAFAGRVSWSRELTDQEAKPFISLSYIDGSEWIKM* 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2434576 2437702 + Vvi11g259 Vvi11g259 771700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g259 313 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 312 - -
Vvi11g259 313 SUPERFAMILY Pectin lyase-like 11 312 IPR011050 -
Vvi11g259 313 Pfam Pectinesterase 17 307 IPR000070 GO:0030599|GO:0042545
Vvi11g259 313 ProSitePatterns Pectinesterase signature 2. 170 179 IPR033131 -
Vvi11g259 313 Gene3D - 11 313 IPR012334 -
Vvi11g259 313 PANTHER PECTINESTERASE 1 312 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g259 K01051 - vvi:104880639 641.728