Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g267 ATGTCGAAAACACCCCCACCTTCTGTCCAAATTCACTTCTACACCCTCTCTATCCTCCTCTTCTCTTTAACCTTTTATGGGAATTCTCAGGCCAGTGATCAGGAGCTCTCAATCCTACTGAAGCTTAAGCAACACTGGCATAATCCGCCAGCCATCGATCACTGGACTTCGTCCAATTCATCCTACTGCACATGGCCGGAGATTGAATGTGCAGAGGATGGCTCTGTCACTGGAATCTCTCTTGTGAACATCAACATCACCAACGAAATCCCACCCTTCATCTGTGACCTGAAGAACATCACAACCATTGATCTCCAACTCAACTACATCCCTGGTGGATTCCCTACAGTTCTGGTTTTGTACTCCAATCAATTCACAGGGGAGATTCCAGAAAGCATTGGCAATCTAACAGCCCTGAGAGACGTTAGGTTGTTCAGCAACAATCTGTCCGGTATACTGCCTCCAGACTTCGGGCGATACTCAATGCTGGAAGCGTTTGAGGTAGCTTCCAACAGTTTTACCGGAAGGCTTCCAGAGAACTTGTGCGCAGGTGGAAAATTGGAAGGATTGGTAGCCTTTGATAATAAGCTCAGTGGGGAATTGCCTGAATCCCTTGGGAATTGCAGGAATTTGAAAACTGTCATGGTTTACAATAACTCGCTTTCAGGCAACGTTCCCAGTGGTCTATGGACTTTAGTGAACATATCACGGCTGATGCTAAGCCACAATTCATTTACAGGTGAGCTGCCTGATGAATTGGGGTGGAATCTTTCTCGGCTTGAGATCAGAGACAACATGTTTTATGGAAATATTCCAGCTGGAGTAGCTTCCTGGAAGAACCTGGTGGTGTTTGATGCACGCAATAACCAATTATCCGGTCCAATTCCTTCTGAATTAACAGCCCTACCTAGCCTCACTACTCTTTTTCTCGACAGAAACCTATTTGACGGTCACCTTCCATCCAAGATAGTGTCTTGGAAGTCGCTGAATTTCCTGAACCTTAGCCGAAATCAGATCTCTGGCATGATCCCGGCTGAAATTGGCACTGGCTTCCAACTCTGCCATTCTGAGACAAGGAAGAAGAGCAAGATCTCATCAGAATCTTTGGCTTTGATTCTGATTGTTGCTGCAGCAGCCGCTGTGTTGGCCTTGTCATTTTCATTCATTGTCTTCAGAGTCTATAGAAGGAAGACGCACAGATTTGATCCCACATGGAAACTCACCTCATTCCAGAGATTGAATTTCACTGAAGCAAACATTTTGTCAAGTTTAGCAGAGAATAATGTGATTGGAAGTGGCGGGTCAGGGAAAGTATACTGTGTTCCTGTAAATCATTTGGGTGAAGTTGTGGCTGTGAAGAGGATTTGGACTCACAGAAACTTGGATCACAAGCTTGAGAAAGAATTTTTAGCAGAAGTTGAAATACTGGGTGCAATTCGGCACTCCAATATCATAAAATTGCTGTGTTGTGTTTCAAGTGAGGATTCAAAACTTCTGGTCTATGAGTATATGGAAAGGAGAAGCCTGGATCGGTGGCTCCATAGGAAGAGAAGGCCGATGATTGCCTCGGGTTTAGTCCATCATTTTGTCTTGGCCTGGCCCCAGAGGTTGAAGATTGCTGTGGATATTGCCCAGGGTCTATGCTACATGCACCATGACTGTTCACCTCCCATTGTTCATCGAGATGTGAAGTCGAGCAATATCCTGCTGGATTCTGAGTTCAATGCAAAATTAGCAGATTTTGGATTGGCAAAGATGCTGATCAAGCCCGGAGAGCTGAACACAATGTCAACTGTGGCAGGCTCAGTCGGGTACATGGCACCAGAGTCTGCTCATACTGCAAGAGTGAGTGAGAAGACTGATGTTTACAGCTTCGGGGTAATCCTTCTGGAGCTGGTAACAGGACGGGAAGCCAGTGATGGAGATGAGCACACATGCCTTGTTGAGTGGGCATGGCAGCACATCCAAGAAGGCAAGCATACAGCCGACGCCTTGGACAAGGAGATCAAGGAACCCTGCTACTTGGATGAGATGAGCAGTGTGTTCAAGCTAGGGATCATTTGTACTGGCACACTGCCTTCTACCAGGCCCAGCATGAGGAAGGTTTTGAAGATCTTGCTCCAATACAGCAATCCACTAGAGGTCTATGGAGGGGAGAATACCGGAAGAGAATACGATGCCGCCCCCCTCCTCGACACAAAGCCAGCGAGAATATCAGAAAATAATGGCAGTAATTTTGCGTCCAATGTGTGA 2253 46.34 MSKTPPPSVQIHFYTLSILLFSLTFYGNSQASDQELSILLKLKQHWHNPPAIDHWTSSNSSYCTWPEIECAEDGSVTGISLVNINITNEIPPFICDLKNITTIDLQLNYIPGGFPTVLVLYSNQFTGEIPESIGNLTALRDVRLFSNNLSGILPPDFGRYSMLEAFEVASNSFTGRLPENLCAGGKLEGLVAFDNKLSGELPESLGNCRNLKTVMVYNNSLSGNVPSGLWTLVNISRLMLSHNSFTGELPDELGWNLSRLEIRDNMFYGNIPAGVASWKNLVVFDARNNQLSGPIPSELTALPSLTTLFLDRNLFDGHLPSKIVSWKSLNFLNLSRNQISGMIPAEIGTGFQLCHSETRKKSKISSESLALILIVAAAAAVLALSFSFIVFRVYRRKTHRFDPTWKLTSFQRLNFTEANILSSLAENNVIGSGGSGKVYCVPVNHLGEVVAVKRIWTHRNLDHKLEKEFLAEVEILGAIRHSNIIKLLCCVSSEDSKLLVYEYMERRSLDRWLHRKRRPMIASGLVHHFVLAWPQRLKIAVDIAQGLCYMHHDCSPPIVHRDVKSSNILLDSEFNAKLADFGLAKMLIKPGELNTMSTVAGSVGYMAPESAHTARVSEKTDVYSFGVILLELVTGREASDGDEHTCLVEWAWQHIQEGKHTADALDKEIKEPCYLDEMSSVFKLGIICTGTLPSTRPSMRKVLKILLQYSNPLEVYGGENTGREYDAAPLLDTKPARISENNGSNFASNV* 751
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2478090 2481470 - Vvi11g267 Vvi11g267 771708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g267 750 ProSiteProfiles Protein kinase domain profile. 424 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g267 750 CDD STKc_IRAK 430 706 - -
Vvi11g267 750 Gene3D Ribonuclease Inhibitor 31 183 IPR032675 -
Vvi11g267 750 Gene3D Ribonuclease Inhibitor 259 364 IPR032675 -
Vvi11g267 750 Gene3D Ribonuclease Inhibitor 184 258 IPR032675 -
Vvi11g267 750 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 15 118 - -
Vvi11g267 750 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 351 731 - -
Vvi11g267 750 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 116 349 - -
Vvi11g267 750 Gene3D Phosphorylase Kinase; domain 1 406 503 - -
Vvi11g267 750 SMART serkin_6 424 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g267 750 Pfam Protein kinase domain 426 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g267 750 ProSitePatterns Protein kinases ATP-binding region signature. 430 453 IPR017441 GO:0005524
Vvi11g267 750 SUPERFAMILY Protein kinase-like (PK-like) 416 708 IPR011009 -
Vvi11g267 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 558 570 IPR008271 GO:0004672|GO:0006468
Vvi11g267 750 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 351 731 - -
Vvi11g267 750 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 15 118 - -
Vvi11g267 750 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 116 349 - -
Vvi11g267 750 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Vvi11g267 750 Gene3D Transferase(Phosphotransferase) domain 1 504 716 - -
Vvi11g267 750 SUPERFAMILY L domain-like 116 345 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g18 Vvi11g267 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76043 PF00069 Pkinase 7.00E-47 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g267 - K00924 vvi:100247568 895.575