Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g276 ATGGAGAATCCTACTCCTGCAAGCTACAGCGGCGGAAGCGGAGGGGAGACGACGGTGACGGTAGCGGCGAGAGAGAAGTGTGTGGGGAGGAACAACAAGGGAGTGACCTGGGGGTTCACTTCGGTGATTGGGAGACGGAGAGAGATGGAGGACGCCGTGGCGGTTGTCCCGGGGTTCATGTCTCGCACGTGCGATCACATCGGCGGTTGTACGGCACCAGCTTCGAGAACCTCCAGAGAGATCTCCCCCGTCCATTTCTTCGGCGTCTACGACGGCCATGGTGGCTCTCAGGTGGCTAAATTTTGTGCTGAGAGGATGCATGAAATGGTAGTGGAGGAGTGGGACCGGGAAGCAGTTGACGGATATGAATGGCGTAGGAGATGGGAAGTGGCATTTTCTAGTGGTTTTGAGAGGGCCGACAATGTGGTTATGACAGAGGAGGTGGCACCAGAAATGGTTGGTTCAACTGCTGTCGTGGTGGTTCTATCAGGTTGCCAGATTATTACATCCAATTGTGGTGACTCAAGGGCAGTGCTCTGCCGAGGGACTCAAACAATCCCCTTAACTGTTGATCAGAAGCCTGATAGAGAAGATGAACTCCGACGAATTGAAGGAGAGGGAGGGAAAGTCATAAACTGGAACGGTGCTAGGGTTTTCGGAGTTCTTGCTATGTCCAGAGCCATAGGAGATCGATATTTGCGGCCATGGATTATTCCAGTGCCTGAGATCACTTTCACAACAAGGTGTGATGAGGATGAATGTTTGATTTTGGCAAGTGATGGGCTTTGGGATGTTATGTCAAATGATGAAGTTGGAGAGGTGGCTCGCCGCCTTCTAAGACGGCGGCGAAGGTTAATGATGGCTGATGAGACTCCTGCACAATCTGTTGCTGATAATCTCACTGAAATAGCATACGGGAGAAATAGCTCAGACAACATATCTATCATTGTTGTTGATCTGAAATCAAAGAGAAGGCGTCAGCAAAGGCAATGA 993 50.86 MENPTPASYSGGSGGETTVTVAAREKCVGRNNKGVTWGFTSVIGRRREMEDAVAVVPGFMSRTCDHIGGCTAPASRTSREISPVHFFGVYDGHGGSQVAKFCAERMHEMVVEEWDREAVDGYEWRRRWEVAFSSGFERADNVVMTEEVAPEMVGSTAVVVVLSGCQIITSNCGDSRAVLCRGTQTIPLTVDQKPDREDELRRIEGEGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTTRCDEDECLILASDGLWDVMSNDEVGEVARRLLRRRRRLMMADETPAQSVADNLTEIAYGRNSSDNISIIVVDLKSKRRRQQRQ* 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2548078 2561422 - Vvi11g276 Vvi11g276 771717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g276 330 SUPERFAMILY PP2C-like 30 321 IPR036457 -
Vvi11g276 330 ProSiteProfiles PPM-type phosphatase domain profile. 36 320 IPR001932 -
Vvi11g276 330 CDD PP2Cc 38 320 IPR001932 -
Vvi11g276 330 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Vvi11g276 330 PANTHER ALPHABET, ISOFORM E-RELATED 16 330 - -
Vvi11g276 330 SMART PP2C_SIG_2 65 320 IPR001932 -
Vvi11g276 330 SMART PP2C_4 25 318 IPR001932 -
Vvi11g276 330 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 16 330 - -
Vvi11g276 330 Pfam Protein phosphatase 2C 44 313 IPR001932 -
Vvi11g276 330 Gene3D - 26 330 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi9g289 Vvi11g276 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g276 K14497 - vvi:109121390 635.565