Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g30 ATGGAGGACAATGGGAGTAACAAGGTGACCGGAATCAGGCAGATTGTTCGGTTGAAGGAATTCCTTCAGAAGTGGCAATCAGTCACTCTCAGCCCAAAAGGAAATAATAGTGTCCACCCCAATCAAACGCCCGGGGGCATTTCACCAGCAATTAATATGAGGTTGAGGAACTCAAATGTTATCTCAGATTCAGATGAGGATGGTTGCCACAGCCCTGAACCACCACCTGATGTCCCCAAAGGGTATTTGGCGGTTTATGTAGGGTCAGAGCTTCGGAGGTTCATCATTCCCACCAGCTATCTTACCCACCCGCTGTTCAAGGTGCTGTTGGAAAAGGTGGAAGAGGAGTTTGGATTTGATCACAGTGGTGGGCTCACAATCCCATGCGAGATTGAGACCTTCAAGTACCTGATGAAGTGCATGGAGAGCCATCCTGAGGCTCAACCTGATGAAAACAATACATCTGGAAGATCATTAACCTTGGAAGAGTAA 492 47.56 MEDNGSNKVTGIRQIVRLKEFLQKWQSVTLSPKGNNSVHPNQTPGGISPAINMRLRNSNVISDSDEDGCHSPEPPPDVPKGYLAVYVGSELRRFIIPTSYLTHPLFKVLLEKVEEEFGFDHSGGLTIPCEIETFKYLMKCMESHPEAQPDENNTSGRSLTLEE* 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 528066 530450 - Vvi11g30 Vvi11g30 771471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g30 163 Pfam Auxin responsive protein 64 140 IPR003676 GO:0009733
Vvi11g30 163 PANTHER AUXIN-INDUCED PROTEIN 15A 7 153 - -
Vvi11g30 163 MobiDBLite consensus disorder prediction 32 51 - -
Vvi11g30 163 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 153 IPR003676 GO:0009733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g30 K14488 - vvi:100266455 326.635