Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g30 | ATGGAGGACAATGGGAGTAACAAGGTGACCGGAATCAGGCAGATTGTTCGGTTGAAGGAATTCCTTCAGAAGTGGCAATCAGTCACTCTCAGCCCAAAAGGAAATAATAGTGTCCACCCCAATCAAACGCCCGGGGGCATTTCACCAGCAATTAATATGAGGTTGAGGAACTCAAATGTTATCTCAGATTCAGATGAGGATGGTTGCCACAGCCCTGAACCACCACCTGATGTCCCCAAAGGGTATTTGGCGGTTTATGTAGGGTCAGAGCTTCGGAGGTTCATCATTCCCACCAGCTATCTTACCCACCCGCTGTTCAAGGTGCTGTTGGAAAAGGTGGAAGAGGAGTTTGGATTTGATCACAGTGGTGGGCTCACAATCCCATGCGAGATTGAGACCTTCAAGTACCTGATGAAGTGCATGGAGAGCCATCCTGAGGCTCAACCTGATGAAAACAATACATCTGGAAGATCATTAACCTTGGAAGAGTAA | 492 | 47.56 | MEDNGSNKVTGIRQIVRLKEFLQKWQSVTLSPKGNNSVHPNQTPGGISPAINMRLRNSNVISDSDEDGCHSPEPPPDVPKGYLAVYVGSELRRFIIPTSYLTHPLFKVLLEKVEEEFGFDHSGGLTIPCEIETFKYLMKCMESHPEAQPDENNTSGRSLTLEE* | 164 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 528066 | 530450 | - | Vvi11g30 | Vvi11g30 | 771471 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g30 | 163 | Pfam | Auxin responsive protein | 64 | 140 | IPR003676 | GO:0009733 | |
Vvi11g30 | 163 | PANTHER | AUXIN-INDUCED PROTEIN 15A | 7 | 153 | - | - | |
Vvi11g30 | 163 | MobiDBLite | consensus disorder prediction | 32 | 51 | - | - | |
Vvi11g30 | 163 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 7 | 153 | IPR003676 | GO:0009733 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g30 | K14488 | - | vvi:100266455 | 326.635 |