Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g337 | ATGCAGAGATACCAAGTTACTTCCTTCTTTGGAGCACGTGGGCTTTGGGAGAAAGGGTACACGGGTGCAAAGGTCAAAATGGCCATATTTGACACTGGCATTCGGGCGAATCACCCACATTTCCGGAACATCAAGGAGCGCACAAATTGGACAAATGAGGATACACTAAATGACAATCTTGGGCATGGAACCTTTGTGGCAGGGGTTATTGCTGGTCAATATGACGAGTGTCTTGGTTTTGCACCAGACACCGAGATTTACGCTTTTCGAGTATTTACAGATGCACAGGTATCATACACATCATGGTTCCTTGATGCATTCAACTATGCCATTGCAACCAATATGGATGTGCTAAATTTGAGCATAGGTGGACCTGATTACTTGGATCTTCCATTTGTAGAGAAGGTTTGGGAACTAACAGCAAATAACATTATCATGGTTTCGGCAATTGGAAATGATGGACCACTTTATGGTACTTTGAACAATCCTGCAGATCAAAGCGATGTTATTGGTGTTGGTGGTATTGACTATGGTGATCACATAGCTTCATTCTCTTCTCGTGGCATGAGTACTTGGGAAATTCCTCATGGATATGGTCGAGTGAAGCCAGATGTTGTCGCATATGGAAGGGAAATTATGGGATCCAGTATCAGTGCTAATTGTAAAAGTTTATCAGGCACTAGCGTTGCAAGCCCTGTGGTTGCTGGTGTGGTCTGTCTGCTTGTAAGTGTCATCCCTGAACACGACCGCAAGAACATTTTAAATCCAGCAAGCATGAAGCAAGCACTGGTCGAAGGCGCAGCAAGGCTTCCTGATGCCAATATGTATGAGCAGGGTGCAGGCAGAGTTCATCTGTTGGAATCTTATGAAATCCTGAAGAGCTACCAACCTCGGGCAAGCATCTTTCCTAGCATTCTTGATTATACGGACTGCCCTTATTCTTGGCCCTTCTGTCGTCAACCGCTCTATGCAGGTGCCATGCCTGTTATCTTCAATGCTACCATTTTGAATGGGATGGGGGTACTTGGATATGTTGAAAGTCCTCCAACATGGCATCCTTCAGAGGAGGAAGGCAATCTTCTCAGCATTCGCTTCACATACTCAGAAGTCATATGGCCTTGGACTGGTTATCTAGCACTCCACATGCAAATAAAAGAAGAAGCTGCACTGTTTTCTGGAGAGATTGAGGGCAATGTAACTGTGAAAATATATAGCCCACCAGCTCAAGGAGAAAAGAATGTTCGAAGAAGTACCTGTGTACTTCAGTTGAAACTAAAAGTGGTTCCAACTCCTCCAAGATCAAAAAGAGTCCTTTGGGATCAATTTCACAGTATCAAATATCCACCTGGTTATATTCCAAGAGACTCTTTGGATGTTCGCAATGACATTCTTGATTGGCATGGAGATCATCTGCACACAAATTTTCATATTATGTTTAACATGTTAAGAGATGCTGGATACTATGTTGAAACACTGGGTTCACCTCTTACTTGCTTTGATGCCCGCCAGTATGGTACCCTTCTTCTGGTGGATCTCGAAGATGAGTACTTTAAAGAAGAGATCCAAAAACTTAGGGACGATGTTATCAATACTGGATTGGGCTTGGCTGTATTTGCAGAATGGTATAATGTGGATACAATGGTGAAGATGAGATTTTTCGATGACAACACACGGAGCTGGTGGACCCCTGTTACTGGAGGTGCAAATATTCCTGCTCTGAATGATCTTTTGGCACCATTTGGGATTGCTTTTGGAGATAAGATACTCAATGGTGATTTTTCTATTGATGGTGAGCATAGTCGATATGCATCTGGAACGGATATTGTAAGGTTTCCAGCAGGTGGGTATGTGCATGCCTTCCCTTTCATGGATAGCTCGGAGAGTGCAGCCACTCAGAATGTACTGCTAACTTCTGGCATGGCCAAGGCAGACTCTCCCATTCTTGGCCTTCTGGAGTTGGGTGAGGGTCGTATTGCCGTTTATGGAGACTCCAACTGTTTGGACAGCAGCCACATGGTTACTCACTGTTATTGGCTTCTAAGAAAAATATTAGATTTCACCAGTGGGAATATCAAAGATCCAGTGCTTTTCTCAACTTCTGTTAGACGAGCTGCAGCCTTGTACCAAGATGACAACCAATTACCATCTCGAAGAACTGATGTTGATTTTTCTACATATTCTGCTGTTGTAGGAAAGGAATTGATCTGCAGAAGTGACTCCAGGTTTGAGGTATGGGGGACTAAAGGTTACAGTATACATGTCATGGGAAGAAACCGAAGATTGCCAGGTTATCCTGCTATTGATTTGGGCAGAGGTTTAAACTCCACTGTTGAGACTTCCAATTTGAAGCAGCCCCAGTGGACTCAAAATAATAAAGGCGAACATTCAGGAAACAATATCTTTGGTTTGCTCTACAGAGACGAGCTTGATATGCCTGTGCTAGTTGCTAGTCATTGGCTTGTCCCGGCTCTTGTTGCCATTTCTGGTCTTCTGCTTTTCTTAAGCTTTTGGCGAATTCGACAGAAGCGGCGCCGGCGTAGGAAAGGATCAAGCTCTGGTCGATTAGGTAATCTTTAG | 2577 | 43.81 | MQRYQVTSFFGARGLWEKGYTGAKVKMAIFDTGIRANHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGQYDECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKVWELTANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYGDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSSISANCKSLSGTSVASPVVAGVVCLLVSVIPEHDRKNILNPASMKQALVEGAARLPDANMYEQGAGRVHLLESYEILKSYQPRASIFPSILDYTDCPYSWPFCRQPLYAGAMPVIFNATILNGMGVLGYVESPPTWHPSEEEGNLLSIRFTYSEVIWPWTGYLALHMQIKEEAALFSGEIEGNVTVKIYSPPAQGEKNVRRSTCVLQLKLKVVPTPPRSKRVLWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVETLGSPLTCFDARQYGTLLLVDLEDEYFKEEIQKLRDDVINTGLGLAVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSIDGEHSRYASGTDIVRFPAGGYVHAFPFMDSSESAATQNVLLTSGMAKADSPILGLLELGEGRIAVYGDSNCLDSSHMVTHCYWLLRKILDFTSGNIKDPVLFSTSVRRAAALYQDDNQLPSRRTDVDFSTYSAVVGKELICRSDSRFEVWGTKGYSIHVMGRNRRLPGYPAIDLGRGLNSTVETSNLKQPQWTQNNKGEHSGNNIFGLLYRDELDMPVLVASHWLVPALVAISGLLLFLSFWRIRQKRRRRRKGSSSGRLGNL* | 859 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3153635 | 3162167 | + | Vvi11g337 | Vvi11g337 | 771778 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g337 | 858 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 226 | 236 | IPR023828 | - | |
Vvi11g337 | 858 | CDD | Peptidases_S8_SKI-1_like | 16 | 272 | IPR034185 | - | |
Vvi11g337 | 858 | ProSitePatterns | Serine proteases, subtilase family, histidine active site. | 62 | 72 | IPR022398 | - | |
Vvi11g337 | 858 | PRINTS | Subtilisin serine protease family (S8) signature | 22 | 41 | IPR015500 | - | |
Vvi11g337 | 858 | PRINTS | Subtilisin serine protease family (S8) signature | 58 | 71 | IPR015500 | - | |
Vvi11g337 | 858 | PRINTS | Subtilisin serine protease family (S8) signature | 225 | 241 | IPR015500 | - | |
Vvi11g337 | 858 | PANTHER | MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE | 609 | 771 | - | - | |
Vvi11g337 | 858 | PANTHER | MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE | 27 | 580 | - | - | |
Vvi11g337 | 858 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 1 | 292 | - | - | |
Vvi11g337 | 858 | Pfam | Subtilase family | 23 | 281 | IPR000209 | GO:0006508|GO:0008236 | |
Vvi11g337 | 858 | Gene3D | Peptidase S8/S53 domain | 2 | 287 | IPR036852 | GO:0004252|GO:0006508 | |
Vvi11g337 | 858 | PANTHER | PEPTIDASE S8 | 609 | 771 | - | - | |
Vvi11g337 | 858 | PANTHER | PEPTIDASE S8 | 27 | 580 | - | - | |
Vvi11g337 | 858 | SUPERFAMILY | Subtilisin-like | 7 | 284 | IPR036852 | GO:0004252|GO:0006508 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g337 | K08653 | - | vvi:100264570 | 1705.26 |