Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g337 ATGCAGAGATACCAAGTTACTTCCTTCTTTGGAGCACGTGGGCTTTGGGAGAAAGGGTACACGGGTGCAAAGGTCAAAATGGCCATATTTGACACTGGCATTCGGGCGAATCACCCACATTTCCGGAACATCAAGGAGCGCACAAATTGGACAAATGAGGATACACTAAATGACAATCTTGGGCATGGAACCTTTGTGGCAGGGGTTATTGCTGGTCAATATGACGAGTGTCTTGGTTTTGCACCAGACACCGAGATTTACGCTTTTCGAGTATTTACAGATGCACAGGTATCATACACATCATGGTTCCTTGATGCATTCAACTATGCCATTGCAACCAATATGGATGTGCTAAATTTGAGCATAGGTGGACCTGATTACTTGGATCTTCCATTTGTAGAGAAGGTTTGGGAACTAACAGCAAATAACATTATCATGGTTTCGGCAATTGGAAATGATGGACCACTTTATGGTACTTTGAACAATCCTGCAGATCAAAGCGATGTTATTGGTGTTGGTGGTATTGACTATGGTGATCACATAGCTTCATTCTCTTCTCGTGGCATGAGTACTTGGGAAATTCCTCATGGATATGGTCGAGTGAAGCCAGATGTTGTCGCATATGGAAGGGAAATTATGGGATCCAGTATCAGTGCTAATTGTAAAAGTTTATCAGGCACTAGCGTTGCAAGCCCTGTGGTTGCTGGTGTGGTCTGTCTGCTTGTAAGTGTCATCCCTGAACACGACCGCAAGAACATTTTAAATCCAGCAAGCATGAAGCAAGCACTGGTCGAAGGCGCAGCAAGGCTTCCTGATGCCAATATGTATGAGCAGGGTGCAGGCAGAGTTCATCTGTTGGAATCTTATGAAATCCTGAAGAGCTACCAACCTCGGGCAAGCATCTTTCCTAGCATTCTTGATTATACGGACTGCCCTTATTCTTGGCCCTTCTGTCGTCAACCGCTCTATGCAGGTGCCATGCCTGTTATCTTCAATGCTACCATTTTGAATGGGATGGGGGTACTTGGATATGTTGAAAGTCCTCCAACATGGCATCCTTCAGAGGAGGAAGGCAATCTTCTCAGCATTCGCTTCACATACTCAGAAGTCATATGGCCTTGGACTGGTTATCTAGCACTCCACATGCAAATAAAAGAAGAAGCTGCACTGTTTTCTGGAGAGATTGAGGGCAATGTAACTGTGAAAATATATAGCCCACCAGCTCAAGGAGAAAAGAATGTTCGAAGAAGTACCTGTGTACTTCAGTTGAAACTAAAAGTGGTTCCAACTCCTCCAAGATCAAAAAGAGTCCTTTGGGATCAATTTCACAGTATCAAATATCCACCTGGTTATATTCCAAGAGACTCTTTGGATGTTCGCAATGACATTCTTGATTGGCATGGAGATCATCTGCACACAAATTTTCATATTATGTTTAACATGTTAAGAGATGCTGGATACTATGTTGAAACACTGGGTTCACCTCTTACTTGCTTTGATGCCCGCCAGTATGGTACCCTTCTTCTGGTGGATCTCGAAGATGAGTACTTTAAAGAAGAGATCCAAAAACTTAGGGACGATGTTATCAATACTGGATTGGGCTTGGCTGTATTTGCAGAATGGTATAATGTGGATACAATGGTGAAGATGAGATTTTTCGATGACAACACACGGAGCTGGTGGACCCCTGTTACTGGAGGTGCAAATATTCCTGCTCTGAATGATCTTTTGGCACCATTTGGGATTGCTTTTGGAGATAAGATACTCAATGGTGATTTTTCTATTGATGGTGAGCATAGTCGATATGCATCTGGAACGGATATTGTAAGGTTTCCAGCAGGTGGGTATGTGCATGCCTTCCCTTTCATGGATAGCTCGGAGAGTGCAGCCACTCAGAATGTACTGCTAACTTCTGGCATGGCCAAGGCAGACTCTCCCATTCTTGGCCTTCTGGAGTTGGGTGAGGGTCGTATTGCCGTTTATGGAGACTCCAACTGTTTGGACAGCAGCCACATGGTTACTCACTGTTATTGGCTTCTAAGAAAAATATTAGATTTCACCAGTGGGAATATCAAAGATCCAGTGCTTTTCTCAACTTCTGTTAGACGAGCTGCAGCCTTGTACCAAGATGACAACCAATTACCATCTCGAAGAACTGATGTTGATTTTTCTACATATTCTGCTGTTGTAGGAAAGGAATTGATCTGCAGAAGTGACTCCAGGTTTGAGGTATGGGGGACTAAAGGTTACAGTATACATGTCATGGGAAGAAACCGAAGATTGCCAGGTTATCCTGCTATTGATTTGGGCAGAGGTTTAAACTCCACTGTTGAGACTTCCAATTTGAAGCAGCCCCAGTGGACTCAAAATAATAAAGGCGAACATTCAGGAAACAATATCTTTGGTTTGCTCTACAGAGACGAGCTTGATATGCCTGTGCTAGTTGCTAGTCATTGGCTTGTCCCGGCTCTTGTTGCCATTTCTGGTCTTCTGCTTTTCTTAAGCTTTTGGCGAATTCGACAGAAGCGGCGCCGGCGTAGGAAAGGATCAAGCTCTGGTCGATTAGGTAATCTTTAG 2577 43.81 MQRYQVTSFFGARGLWEKGYTGAKVKMAIFDTGIRANHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGQYDECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKVWELTANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYGDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSSISANCKSLSGTSVASPVVAGVVCLLVSVIPEHDRKNILNPASMKQALVEGAARLPDANMYEQGAGRVHLLESYEILKSYQPRASIFPSILDYTDCPYSWPFCRQPLYAGAMPVIFNATILNGMGVLGYVESPPTWHPSEEEGNLLSIRFTYSEVIWPWTGYLALHMQIKEEAALFSGEIEGNVTVKIYSPPAQGEKNVRRSTCVLQLKLKVVPTPPRSKRVLWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVETLGSPLTCFDARQYGTLLLVDLEDEYFKEEIQKLRDDVINTGLGLAVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSIDGEHSRYASGTDIVRFPAGGYVHAFPFMDSSESAATQNVLLTSGMAKADSPILGLLELGEGRIAVYGDSNCLDSSHMVTHCYWLLRKILDFTSGNIKDPVLFSTSVRRAAALYQDDNQLPSRRTDVDFSTYSAVVGKELICRSDSRFEVWGTKGYSIHVMGRNRRLPGYPAIDLGRGLNSTVETSNLKQPQWTQNNKGEHSGNNIFGLLYRDELDMPVLVASHWLVPALVAISGLLLFLSFWRIRQKRRRRRKGSSSGRLGNL* 859
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3153635 3162167 + Vvi11g337 Vvi11g337 771778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g337 858 ProSitePatterns Serine proteases, subtilase family, serine active site. 226 236 IPR023828 -
Vvi11g337 858 CDD Peptidases_S8_SKI-1_like 16 272 IPR034185 -
Vvi11g337 858 ProSitePatterns Serine proteases, subtilase family, histidine active site. 62 72 IPR022398 -
Vvi11g337 858 PRINTS Subtilisin serine protease family (S8) signature 22 41 IPR015500 -
Vvi11g337 858 PRINTS Subtilisin serine protease family (S8) signature 58 71 IPR015500 -
Vvi11g337 858 PRINTS Subtilisin serine protease family (S8) signature 225 241 IPR015500 -
Vvi11g337 858 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 609 771 - -
Vvi11g337 858 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 27 580 - -
Vvi11g337 858 ProSiteProfiles Serine proteases, subtilase domain profile. 1 292 - -
Vvi11g337 858 Pfam Subtilase family 23 281 IPR000209 GO:0006508|GO:0008236
Vvi11g337 858 Gene3D Peptidase S8/S53 domain 2 287 IPR036852 GO:0004252|GO:0006508
Vvi11g337 858 PANTHER PEPTIDASE S8 609 771 - -
Vvi11g337 858 PANTHER PEPTIDASE S8 27 580 - -
Vvi11g337 858 SUPERFAMILY Subtilisin-like 7 284 IPR036852 GO:0004252|GO:0006508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g337 K08653 - vvi:100264570 1705.26