Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g363 ATGTTAATTCATAATCTCAATCATTACTCAAAGAGAGTAGAAGCAGATTCTTCAGCTGTTTCAACCCCTGAAACTCCTTTCAATCTTACGCTCTCAATAGGCCCAGTGTTGTTGCAGCCTCTGGAGATACATAGAGTTTGTTTGCCACCCCAGAAAACTACATTTCAGAAACTCAAGCACAGACTGTCTGAGATTTTCTTCCCTGATGATCCTTTCCACAGATTCAAGAACCAGACTTTTCTCAGGAAAGTGGTTCTGGGTCTCCATTGTCTTTTCCCTATACTGCAGTGGGTGCCTAGTTACAGTCTCAGTACTTTTAGATCTGATCTCGTCTCTGGACTCACCATTGCTAGCCTGGCCATTCCTCAGGGAATCAGTTATGCCAAGCTTGCAAACTTGCCTCCTATAATTGGACTTTATTCAAGTTTTGTGCCACCATTAATATATTCTCTTCTTGGGAGCTCTAAACATCTTGGTGTGGGTCCAGTTTCAATAGCATCCTTGGTCATGGGCACAATGCTAAGTGAAACAGTCTCTTCTACTCATGAATCAGATCTCTATCTTAGACTTGCTTTCACTGCTACCTTCTTTGCTGGTTTGTTTCAAGCTTCTTTAGGTTTGTTCAGGTTAGGCTTCATAATTGATTTTCTTTCTAAAGCGACACTGGTTGGTTTCATGGCTGGAGCAGCAGTTATTGTGTCCTTGCAGCAGCTAAAAGGATTGCTTGGGATTGTTCACTTCACTAAAAAAATGCAGATCATCCCTGTAATGTCCTCTGTTTTCGGCCACACAAAAGAGTGGTCCTGGAAAACCATTGTGTTAGGTTTCGGTTTCCTAATATTTCTACTAACAGCAAGGTTGACTAGCTTGAAGAGACCAAAGCTTTTCTGGATTTCAGCAGCAGCTCCATTAACTTCTGTTATTCTGTCAACTCTTTTAGTCTACCTACTCAAATCTGAACTTCATGGTGTTTCAGTGATTGGTGAATTGCCAGATGGTCTGAACCCACCTTCAGCAAACATACTATATTTCCATGGCCCTCATCTAGGCCTTGCTATCAAAGCAGGCATTGTGACAGGGATATTATCACTCACTGAAGGAATTGCAGTGGGAAGAACATTTGCTTCTCTGCAAAATTATCAAGTTGATGGAAACAAAGAGATGATGGCAATTGGTCTAATGAATATGGTTGGTTCTTGCTCATCATGCTATGTTACTACAGGGTCATTCTCCCGATCTGCTGTAAACTACAATGCTGGAGCAAAAACAGCCTTTTCAAACATAGTGATGGCAGGAGCAGTGCTTGTGACACTGCTATTTCTCATGCCACTGTTCTATCACACTCCAAATTTAGTCTTAGCAGCGATCATCATTACTGCAGTGATTGGGTTGATAGACTACAATGCTGCATTTCTGTTGTGGAAGCTTGACAAGCTTGAGTTTTTGGCCTGCTTGTGCTCTTTCTTTGGTGTCTTATTTATCTCTGTGCCAATGGGTCTCGCCATTTCTGTTGGAGTTTCAGTATTCAAGATTCTCCTGCATGTTACCAGGCCTAACACCGTGGCATTGGGGAATATCCCCGGTACTCAAATATACCAAAATGTCAGTCGCTATGAGAATGCTTCAAGAGTTCCATGCTTCCTCATCCTAGGCATTGAATCTCCCATCTATTTTGCAAATTCAACTTATCTTCAAGAAAGGATATTAAGATGGGTTTGGGAAGAGGAAGAGAGGCTTAAAGAAAAGGAGGAGAATCTGAAATGTGTGGTTTTGGATATGACAGCAGTGACAGCCATAGATAGCAGCGGTATTGATGCTATATATGAACTTAGAAAGACACTGCTGAATAGATCAGTTCAGCTGGTGTTGGTAAATCCTGTTGGAAGCGTAATGGAAAAGCTCCATCACTCAAAAATCCTTGATTTGTTTGGAACAAACCAACTTTATTTGACAGTTGGAGAGGCAGTAACTGACATATCATCTTCATGGAAGGCTTAG 1998 41.54 MLIHNLNHYSKRVEADSSAVSTPETPFNLTLSIGPVLLQPLEIHRVCLPPQKTTFQKLKHRLSEIFFPDDPFHRFKNQTFLRKVVLGLHCLFPILQWVPSYSLSTFRSDLVSGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSKHLGVGPVSIASLVMGTMLSETVSSTHESDLYLRLAFTATFFAGLFQASLGLFRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTKKMQIIPVMSSVFGHTKEWSWKTIVLGFGFLIFLLTARLTSLKRPKLFWISAAAPLTSVILSTLLVYLLKSELHGVSVIGELPDGLNPPSANILYFHGPHLGLAIKAGIVTGILSLTEGIAVGRTFASLQNYQVDGNKEMMAIGLMNMVGSCSSCYVTTGSFSRSAVNYNAGAKTAFSNIVMAGAVLVTLLFLMPLFYHTPNLVLAAIIITAVIGLIDYNAAFLLWKLDKLEFLACLCSFFGVLFISVPMGLAISVGVSVFKILLHVTRPNTVALGNIPGTQIYQNVSRYENASRVPCFLILGIESPIYFANSTYLQERILRWVWEEEERLKEKEENLKCVVLDMTAVTAIDSSGIDAIYELRKTLLNRSVQLVLVNPVGSVMEKLHHSKILDLFGTNQLYLTVGEAVTDISSSWKA* 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3381621 3394368 - Vvi11g363 Vvi11g363 771804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g363 665 ProSiteProfiles STAS domain profile. 537 659 IPR002645 -
Vvi11g363 665 SUPERFAMILY SpoIIaa-like 545 657 IPR036513 -
Vvi11g363 665 PANTHER - 23 665 - -
Vvi11g363 665 ProSitePatterns SLC26A transporters signature. 135 156 IPR018045 GO:0008271|GO:0008272
Vvi11g363 665 Pfam STAS domain 538 655 IPR002645 -
Vvi11g363 665 TIGRFAM sulP: sulfate permease 93 655 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vvi11g363 665 CDD STAS_SulP_like_sulfate_transporter 538 652 - -
Vvi11g363 665 Pfam Sulfate permease family 106 485 IPR011547 GO:0016021
Vvi11g363 665 Gene3D STAS domain 517 661 IPR036513 -
Vvi11g363 665 PANTHER SULFATE TRANSPORTER 23 665 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g363 K17471 - vvi:100262777 1244.57