Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g364 ATGGCGCCCTCTACAGAATCGGTCGTCCATGTGAATTTCTCCAACCCCAGAAGCTTTGCCAACAAGTTCAGGTCCCACCTCAAGGAGACCTTCTTCCCCGATGATCCCTTCCGGCAGTTCAGAAACGAACCGCCGCTGCGGCGCACGAAGAAAGCTTTACAATACTTTGTTCCCATCTTTGAATGGCTGCCCAAATACACTTTCAGCATGTTCAAGTATGACGTCCTCGCCGGAATCACCATTGCCAGCCTCGCCATCCCGCAGGGCATCAGCTACGCTAAACTCGCTGAAATCCCTCCCATTATAGGCCTCTATTCGAGTTTTGTTCCACCGTTGGTTTATGCTGTTTTTGGGAGCTCCAGGAGTATGGCAGTGGGAACAGTGGCGGCGGTGTCGTTGCTTATAGCCTCTACCATCGGAGATGTGGTGTCTCCGACGGATGATCCGACATTGTTTCTGCATTTAGTTTTCACAGCCACCTTCATCACAGGGATCTTTCAGACAGCCTTGGGTCTTTTACGACTCGGGATTTTGGTGGATTTCTTATCGCATTCCACTATCACCGGCTTCATGGGAGGGACCGCAACCATCATCTGTCTGCAACAGCTCAAGGGTTTTCTTGGATTGAGCCATTTCACTACTAAAACTGATGTTGTCTCAGTTGTGAGGGCAATCTTCAGCCATAGGAATGAGTGGAGATGGGAAAGTGCAGTTATGGGAGTCTGCTTCCTTCTCTTCCTCCTCTTCACTGTGCAGCTGAGAAAGAGACTGCCGCGGCTGTTTTGGGTGTCAGCAGTGGCTCCAATCGTGACGGTGTTAATTGGCTGCATTATTGCTTACTTCCTTCGCGGCCATGATGCAATCCAAACAGTTGGTCACTTAAAGAAAGGATTAAATCCTCTTTCCATCGGATATTTGAATTTCAACCCTAAGTATCTAACAGCAGTTGTAAAAGCTGGGATCATCACAGCCATCTTAGGACTAGCGGAAGGGATAGCAATAGGGAGGAGCTTTGCGATAATGAAAAACGAGCAAACTGATGGAAACAAAGAGATGATAGCTTTTGGGCTGATGAACATTGTTGGGTCTTTTACTTCTTGCTATTTGACTACAGGCCCATTTTCAAAATCTGCAGTGAACTTCAATGCTGGGTGTAGGTCAGCAATGTCCAATGTGGTGATGGCATTCTGTATGATGCTGACTCTCCTCTTCTTGGCTCCTGTCTTTAGTTACACTCCTCTGGTAGCTCTCTCTGCCATTATCACCTCAGCCATGCTTGGACTCATCAAGTACGATGAGGCCTATCATCTCTTCAAGGTCGACAAGTTTGATTTCTGTATCTGCATGGCTGCGTTTTTGGGAGTTACCTTCGTTACAATGGATGTAGGCCTCATGCTCTCGGTAGGGCTTTCAATTGTGAGAGCACTTCTATATGTGGCCAGGCCTGCCACAGTCAAGCTTGGAAACATACCAAACTCCACGCTCTACCGTGACGTAGAGCAGTATCCGGCTGCAACGTCGTTCCCAGGCGTCCTAGTCCTGCAACTGGGCTCCCCGATTCACTTTGCCAACTCCACTTACATCAGAGAACGGATTTTGAGGTGGATTAACGAGGAAGAGGACGTTTCAAGTCCCAAAGGGACCAATGTCGAGCATGTGCTGCTAGATTTGGGAGGAGTTACCTCCATAGACATGACAGGCATAGAAACCCTGGTTGAAGTCCTAAGAAACATGCAAGCAAAAGGAATCAAGATGGGTTTAGTAAACCCCAGAACTGAGGTATTGGAGAAGTTGATGGTGGCGAAATTCATAGACATCATAGGTCAGGAAGCCATCTTCCTATCAATTGATGAAGCTATCAGAGCATCCCAATTTTCACTCAATGTATGGACACAAAAAGATGGCGTGGACAAAGATCATGTTCCTGACACAAAAGGACTGCTTTGA 1947 47.51 MAPSTESVVHVNFSNPRSFANKFRSHLKETFFPDDPFRQFRNEPPLRRTKKALQYFVPIFEWLPKYTFSMFKYDVLAGITIASLAIPQGISYAKLAEIPPIIGLYSSFVPPLVYAVFGSSRSMAVGTVAAVSLLIASTIGDVVSPTDDPTLFLHLVFTATFITGIFQTALGLLRLGILVDFLSHSTITGFMGGTATIICLQQLKGFLGLSHFTTKTDVVSVVRAIFSHRNEWRWESAVMGVCFLLFLLFTVQLRKRLPRLFWVSAVAPIVTVLIGCIIAYFLRGHDAIQTVGHLKKGLNPLSIGYLNFNPKYLTAVVKAGIITAILGLAEGIAIGRSFAIMKNEQTDGNKEMIAFGLMNIVGSFTSCYLTTGPFSKSAVNFNAGCRSAMSNVVMAFCMMLTLLFLAPVFSYTPLVALSAIITSAMLGLIKYDEAYHLFKVDKFDFCICMAAFLGVTFVTMDVGLMLSVGLSIVRALLYVARPATVKLGNIPNSTLYRDVEQYPAATSFPGVLVLQLGSPIHFANSTYIRERILRWINEEEDVSSPKGTNVEHVLLDLGGVTSIDMTGIETLVEVLRNMQAKGIKMGLVNPRTEVLEKLMVAKFIDIIGQEAIFLSIDEAIRASQFSLNVWTQKDGVDKDHVPDTKGLL* 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3394758 3399173 + Vvi11g364 Vvi11g364 771805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g364 648 ProSiteProfiles STAS domain profile. 501 623 IPR002645 -
Vvi11g364 648 CDD STAS_SulP_like_sulfate_transporter 502 616 - -
Vvi11g364 648 SUPERFAMILY SpoIIaa-like 505 621 IPR036513 -
Vvi11g364 648 PANTHER SULFATE TRANSPORTER 6 632 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vvi11g364 648 ProSitePatterns SLC26A transporters signature. 100 121 IPR018045 GO:0008271|GO:0008272
Vvi11g364 648 Pfam Sulfate permease family 71 451 IPR011547 GO:0016021
Vvi11g364 648 PANTHER SULFATE TRANSPORTER 3.5-RELATED 6 632 IPR030316 GO:1902358
Vvi11g364 648 Gene3D STAS domain 481 625 IPR036513 -
Vvi11g364 648 TIGRFAM sulP: sulfate permease 58 619 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vvi11g364 648 Pfam STAS domain 502 619 IPR002645 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi9g387 Vvi11g364 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g364 K17471 - vvi:100257654 1273.84