Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g365 ATGACCCACAACCCGACCCAACCCAGAAGTAACATTATTGGAATTTTTCTCTATATAAACCACGTAATCCTCCAACTAATCCACTCCGATTTTCCTCATCACAAAGCCATGGAAAACTCTCGTGAATCTGAAGTCACCGTGAATTTCTCCGACCGTCGGAACTTTGCCACCGTCCTCAGATCTGATCTCAAGGAGACCTTCTTTGCCGATGATCCTTTCCAGGAGTTCCGGAATGAACCGCCGAAGCGTCGAACCATAAAAATCTTCCAATATTGTGTTCCCATGTTAGAATGGCTACCCAAATATAATTTCCAATTCTTTAGATATGATTTTCTGGCGGGGATCACCATCGCCAGCCTCGCCATACCTCAGGGGATCAGTTACGCTAAGCTCGCTGAGATTCCTCCCATCATTGGCCTGTATTCGAGTTTTATCCCGCCTTTTGTGTACGCTGTGTTTGGGACCTCCAAGTATCTTGCAGTGGGAACCATAGCTGCGTCGTCCTTGCTTATAGCTTCTACCATTAAAGAAAAAGTGTCCCCGGATGAGGATCCAACATTGTATCTTAATTTGGTCTTCACGACTGCGTTCTGCACTGGGATCTTACAGACAATCTTAGGTGTTCTAAGACTGGGGATTTTGGTGGATTTCTTATCGCATTCCACCATCACCGGCTTCATGGGAGGCACAGCAACCATCATCAGTCTCCAACAGCTCAAGGGTTTTCTTGGATTGAAGCAATTCACTACTAAAACTAATGTCGTCTCCGTTCTGAAAGCCGTCTTCAAGTTTAGACACCAGTGGAGATGGGAGAGTGCGCTATTAGGCATAATCTTCCTTTCTTTCCTCCTCTTCACAGTACAACTGAGGAAGAAGAAACCACAGCTATTTTGGGTGTCAGCAGTGGCTCCAATGGTGACAGTGGTAATCGGGTGCATCATTGCCTATTTCGCTGACGGGGATAAACATGGAATCCACACTGTTGGTCCTTTGAAGAAAGGATTGAATCCCATTTCCATCTACGATTTGAACTTCAACTCTGCCTATATAATGGCGCCCATAAAAGCGGGCTTGCTTACAGGCATCTTGGCTACAACCGAAGGGATAGCAATAGGAAGGAGCTTTGCCATGAAGAGAAATGAGCAAACTGATGGAAACAAAGAGATGATAGCCTTTGGTCTGATGAACCTTGTTGGATCTTTCACTTCTTGTTATTTGACTACTGGCCCATTTTCAAAAACTGCTGTCAATTTCAATGCCGGGGCTAGGACACCAATGGCCAATGTAGTGATGGCACTCTGTATGATGCTGATTCTCCTCTTCTTGGCTCCTGTCTTTCGTTACACCCCTCAGGTAGCTCTCTCTGCCATTATCACCGTAGCCATGCTTGGACTCATCAAGTACGACGAGGTTTATCATCTCTACAAGGTCGACAAGTTTGATTTCTGTATTTGCATGGCTGCATTTTTGGGAGTCATCTTCATTACCATGGATATGGGACTAATGATCTCAGTATGCCTTTCAATCGTCCGAGCACTTCTCTATGTGGCTAGGCCTGCTACTTGCAAGCTCGGGAACATTCCAAACTCAGCACTCTACCGCGACGTAGAGCAATATCCTGCTGCAAGCGGGGTCCCGGGCATCATAGTTCTTCAACTGGGTTCCCCAATTTACTTTGCAAATTGCATTTACCTTAAAGAAAGGATTATGAGGTGGGTTAGGGATGAACAAGGCAATCCGAACTCCAAAACAGCAGATATTGAGCATGTTTTACTAGATTTGGGAGGAGTTACCACTATTGACATGACAGGCATCGAAACCCTGGTTGAAATCCGAAGAAACATTTTAGCAAAAGGAATTAAGATGGGAATAATAAACCCCAGAATCAATGTGTTGGAGAAGATGATGCTTTCCAAATTCGTGGACCTCATAGGCAAGGAATCTATCTTCTTATCAGTTGAAGATGCAGTCAAGACATGTCAATTTTCACTCAATCAATCGCCTCAGAAGGTCAGTTATTGTGTTGTTCCAATAAAGAAAATCTATTCATTAGATATCTTATTGCTGCATATGCAATATTTCCCTGATTGTGAAGTTGAGATGGTATATAGCAAGTTCTCAAAGCGTAAATGGGTCTAA 2139 44.04 MTHNPTQPRSNIIGIFLYINHVILQLIHSDFPHHKAMENSRESEVTVNFSDRRNFATVLRSDLKETFFADDPFQEFRNEPPKRRTIKIFQYCVPMLEWLPKYNFQFFRYDFLAGITIASLAIPQGISYAKLAEIPPIIGLYSSFIPPFVYAVFGTSKYLAVGTIAASSLLIASTIKEKVSPDEDPTLYLNLVFTTAFCTGILQTILGVLRLGILVDFLSHSTITGFMGGTATIISLQQLKGFLGLKQFTTKTNVVSVLKAVFKFRHQWRWESALLGIIFLSFLLFTVQLRKKKPQLFWVSAVAPMVTVVIGCIIAYFADGDKHGIHTVGPLKKGLNPISIYDLNFNSAYIMAPIKAGLLTGILATTEGIAIGRSFAMKRNEQTDGNKEMIAFGLMNLVGSFTSCYLTTGPFSKTAVNFNAGARTPMANVVMALCMMLILLFLAPVFRYTPQVALSAIITVAMLGLIKYDEVYHLYKVDKFDFCICMAAFLGVIFITMDMGLMISVCLSIVRALLYVARPATCKLGNIPNSALYRDVEQYPAASGVPGIIVLQLGSPIYFANCIYLKERIMRWVRDEQGNPNSKTADIEHVLLDLGGVTTIDMTGIETLVEIRRNILAKGIKMGIINPRINVLEKMMLSKFVDLIGKESIFLSVEDAVKTCQFSLNQSPQKVSYCVVPIKKIYSLDILLLHMQYFPDCEVEMVYSKFSKRKWV* 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3399857 3418001 + Vvi11g365 Vvi11g365 771806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g365 712 CDD STAS_SulP_like_sulfate_transporter 539 653 - -
Vvi11g365 712 Gene3D STAS domain 518 663 IPR036513 -
Vvi11g365 712 PANTHER SULFATE TRANSPORTER 3.5-RELATED 40 669 IPR030316 GO:1902358
Vvi11g365 712 TIGRFAM sulP: sulfate permease 94 656 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vvi11g365 712 PANTHER SULFATE TRANSPORTER 40 669 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vvi11g365 712 ProSitePatterns SLC26A transporters signature. 136 157 IPR018045 GO:0008271|GO:0008272
Vvi11g365 712 Pfam Sulfate permease family 107 488 IPR011547 GO:0016021
Vvi11g365 712 Pfam STAS domain 539 656 IPR002645 -
Vvi11g365 712 ProSiteProfiles STAS domain profile. 538 660 IPR002645 -
Vvi11g365 712 SUPERFAMILY SpoIIaa-like 544 660 IPR036513 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi9g387 Vvi11g365 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g365 K17471 - vvi:100252518 1240.71