Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g419 ATGGATAATATCAAAGCCCCATTCAAAGGAATTATCAAGGATTTCAAAGGAAGAAAAGCATGCTATAAACAAGATTGGACCAGTGCACTTCGCTCAGGCACCAGCATACTGGCCCCGACTACCTATATCTTCTTTGCTTCTGCTCTTCCAGTTATTGCTTTTGGAGAACAACTTAGTAGAGAAACAGATGGACACTTGAGCACAGTTGAAACTTTAACTTCCACTGCCATATGTGGTATCATACACTCGATATTTGGTGGGCAGCCTTTGTTGATATTAGGAGTGGCAGAACCCACTGTTATAATGTATACTTATTTGTACAATTTTGCTAAAGGAAGGGCTGATCTTGGACGTGAGCTGTTCTTGGCATGGACCGGATGGGTCTGCTTCTGGACAGCTCTTTTCCTCTTTCTTCTTGCAATATTTAATGCTTGCACCATCATAACCAAATTTACGAGGATTGCGGGGGAGCTTTTTGGCATGTTGATCGCAGTTCTTTTCATTCAAGAAGCTGTCAAGGGGGTGGTGAGTGAATTTCGCATTCCTAAGGATGAAGATCCAAACTCAGAGAAGTATCAATTCCAGTGGCTATATTCAAACGGGTTGCTAGCTATCATATTCTCATTTGGCCTACTATTTACTGCCCTAAAGAGCAGAAGGGCAAGATCATGGTCGTATGGTACAGGGTGGTCCCGAGGTTTCATTGCAGACTATGGTGTTCCTTTGATGGTGTTAGTATGGACAGCTTTGTCATTCAGTGTGCCTAGCAAAGTTCCTTCTGGAGTTCCCAGGAGGCTTTTTAGTCCTCTTCCTTGGGAATCTGCTTCATTGCAGCATTGGATAGTGATCAAGGATATGGGGAAGATCCCTCCAGCATACATCCTTGCTGCCATCATACCAGCTGTGATGATAGCGGGTCTTTACTTTTTTGACCACAGTGTGGCTTCACAAATGTCGCAGCAAAAGGAGTTCAATCTCAAGAACCCATCTGCTTATCATTATGACATCTTATTGCTTGGTGTTATGACTTTGCTCTGTGGATTTCTTGGACTCCCTCCCTCAAATGGGGTACTCCCACAATCTCCCATGCACACTAAGAGCCTTGCCGTTCTCAAGAGACGGTTAATCCGAAGGAAGATGGTACAGAGTGCTAAGGAATGCATAAAGCAACAAGCTAGCAACACTGAGATTTACAGGAAGATGCAGGCTGTTTTTATAGAAATGGACATGGCTCCATCACTATTAGTCACTGAAGAGCTAAAGGACTTGAAGGAAGCAATCATGAAGGGTGAAGATGGAAAAAATGCGGACGATAAATTTGACCCTGAAAAGCACATTGATGATTACTTGCCTGTCCGGGTTAACGAGCAAAGAGTGAGCAACCTGTTACAATCTATTCTCGTGGGAGCATCAGTATTTTCCATGCCCATTATCAGGAGGATTCCTACATCAGTTCTCTGGGGATATTTTGCCTATATGGCCATTGACAGCCTTCCTGGAAACCAGTTCTGGGAAAGAATGTTGCTTCTTTTCATTACTCCTGCCCGGCGCTACAAGGTGTTGGAAGGGGTTCATGCTTCGTTTGTGGAATCAGTGCCCTTCAAATATATTTTCATGTTTACCCTATTCCAGTTTGTGTACCTTCTGGTGTGTTTTGGAGTAACATGGATTCCCATAGCTGGAATATTGTTTCCCTTGCCATTCTTTCTGCTTATAATCATAAGACAGCATGTCCTCCCAAAACTATTCCACCCCCATGACCTCCAGGAGCTGGATGCAGCCGAGTACGAGGAAATTGCTGGTGTTTGGAGCCACAGTCGTACTTTCAAATTCAAGGACCTTGAGCCAACTCATTCAGGGCATAAAGAGGGTGAAGTAGAAATTTGTGATGCCGAGATATTGGATGAGCTGACCACCAGTAGAGGAGAGTTAAAGCTTAGATCTCTAAGCTGTCCGGCAGATTGGATCTCTCAGGTTCATCCGAAGAAAGATGAAGAACATAACGATAGAGACACCAATGAAGCATGA 2028 43.89 MDNIKAPFKGIIKDFKGRKACYKQDWTSALRSGTSILAPTTYIFFASALPVIAFGEQLSRETDGHLSTVETLTSTAICGIIHSIFGGQPLLILGVAEPTVIMYTYLYNFAKGRADLGRELFLAWTGWVCFWTALFLFLLAIFNACTIITKFTRIAGELFGMLIAVLFIQEAVKGVVSEFRIPKDEDPNSEKYQFQWLYSNGLLAIIFSFGLLFTALKSRRARSWSYGTGWSRGFIADYGVPLMVLVWTALSFSVPSKVPSGVPRRLFSPLPWESASLQHWIVIKDMGKIPPAYILAAIIPAVMIAGLYFFDHSVASQMSQQKEFNLKNPSAYHYDILLLGVMTLLCGFLGLPPSNGVLPQSPMHTKSLAVLKRRLIRRKMVQSAKECIKQQASNTEIYRKMQAVFIEMDMAPSLLVTEELKDLKEAIMKGEDGKNADDKFDPEKHIDDYLPVRVNEQRVSNLLQSILVGASVFSMPIIRRIPTSVLWGYFAYMAIDSLPGNQFWERMLLLFITPARRYKVLEGVHASFVESVPFKYIFMFTLFQFVYLLVCFGVTWIPIAGILFPLPFFLLIIIRQHVLPKLFHPHDLQELDAAEYEEIAGVWSHSRTFKFKDLEPTHSGHKEGEVEICDAEILDELTTSRGELKLRSLSCPADWISQVHPKKDEEHNDRDTNEA* 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4037044 4041815 + Vvi11g419 Vvi11g419 771860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g419 675 Gene3D Helical hairpin bin 18 60 - -
Vvi11g419 675 PANTHER ANION EXCHANGE PROTEIN 1 665 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vvi11g419 675 PANTHER BORON TRANSPORTER 6-RELATED 1 665 - -
Vvi11g419 675 Pfam HCO3- transporter family 199 374 IPR011531 GO:0006820|GO:0016021
Vvi11g419 675 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Vvi11g419 675 Pfam HCO3- transporter family 452 542 IPR011531 GO:0006820|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g435 Vvi11g419 ECH
Vvi9g469 Vvi11g419 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g419 K24194 - vvi:100244133 1316.98