Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g425 | ATGGAGGAGGTGTGGTACTGGTTCAAGCTACTCGTGATATGCTTCATGGCGTTAGTGTTCGTGTTGAAGGTGGTAGTGTTGCTTTGGTGGAGACCCAGAAAGATCGAACACCATTTTTCCAAGCAAGGGATTAGAGGTCCCCCTTATCGTTTCTTCATAGGCAATGTCAAAGAGCTTGTGGGTCTCATGTTGAAGGCTTCTTCTCAACCCATGCCTTTCTCTCACAACATACTCCCCAGAGTTCTCTCCTTCTACCATCACTGGAAGAAAATCTATGGTGCAACATTTCTCGTGTGGTTCGGCCCGACCGTTCGTCTCACCATCTCCGATCCGGACCTTATTCGGGAGATTTTCGCCTCCAAGTCGGAATTCTATGAGAAGAACGAGGCACACCCGCTTGTTAAACAGCTTGAAGGTGATGGGCTGCTGAGCCTCAAAGGCGAAAAATGGGCTCATCATAGGAAAATCATAACACCTACCTTGCACATGGAGAATCTCAAACTGATGGTACCGGTGATGGCGAAGAGCGTGACCGAAATGTTGGAGAAATGGATGGCAATGTCAAAATCAGGTGAGGTAGAGATTGAAGTTTCTGAGTGGTACCAAACATTGACCGAAGATGTCATCACCCGAATGGCATTCGGCAGCAGCTATGAAGATGGTAAGGCCATTTTCCAACTCCAAGCTCAGCAAATGGTCATGGCTGCCGAGGCATTTCAGAAAGTTTTCATCCCCGGCTATAGATTCCTTCCAACCAAAAGAAACATGAATTCTTGGAAATTGGACAAGGAGATAAAGAAATCGCTGGTGAAGCTGATTGATCGGCGAAAGGAGAATAGGTGGAAGGAAAATCCGGAGAAATGTCCAAAAGATTTATTGGGGCTAATGATAGAAGAAACGATTACGGTACAGGACATTGTTGAGGAGTGCAAGAGTTTCTTCTTCGCCGGAAAGCAGACAACCTCCAATCTGCTGACCTGGACTACGGTTCTCCTTGCAATGCACCCACAGTGGCAGGTTCGAGCACGTGACGAGGTTTTCCGTGTGTGCGGAGCACGTGATACACCAACCAAAGATGATGTTGTCAAACTTAAGACGCTAAGCATGATCCTCAATGAGTCCCTGCGCCTCTATCCGCCCATCATCGCAGCCATCAGACGGGCCAAAACGGATGTAGAGCTGGGAGGCTACAAGATCCCCCGTGGGATGGAGCTCCTAATCCCAATCCTAGCCGTTCATCATGATCCCTTGATATGGGGCAATGATGCAAATGAATTCAACCCGGCCCGATTCGCGGAAGGAGTGGCCCGAGCCGCCAAGCATCCGGTGGCGTTCATTCCATTCGGCCTGGGCGTCCGTACATGCATTGGCCAAAATTTAGCCATCTTGCAGGCCAAACTGGCCCTTGCCATAATCCTCCAACGCTTCTCCTTCACTCTTGCCCCCTCCTACCAGCATGCACCAACGGTTTTGATGCTCTTGTACCCTCAGTACGGGGCCCCCATCACCTTTCGAACTTTATCCACACCTGATCAAGGTTTTGTAACATTATTCATTCATGAACTTGAATGGTGGTTTATTATTAGATTAGTCGCTTTGGCCCTCTTAAAAATCTATCCCTACAGCTGA | 1629 | 48.5 | MEEVWYWFKLLVICFMALVFVLKVVVLLWWRPRKIEHHFSKQGIRGPPYRFFIGNVKELVGLMLKASSQPMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRLTISDPDLIREIFASKSEFYEKNEAHPLVKQLEGDGLLSLKGEKWAHHRKIITPTLHMENLKLMVPVMAKSVTEMLEKWMAMSKSGEVEIEVSEWYQTLTEDVITRMAFGSSYEDGKAIFQLQAQQMVMAAEAFQKVFIPGYRFLPTKRNMNSWKLDKEIKKSLVKLIDRRKENRWKENPEKCPKDLLGLMIEETITVQDIVEECKSFFFAGKQTTSNLLTWTTVLLAMHPQWQVRARDEVFRVCGARDTPTKDDVVKLKTLSMILNESLRLYPPIIAAIRRAKTDVELGGYKIPRGMELLIPILAVHHDPLIWGNDANEFNPARFAEGVARAAKHPVAFIPFGLGVRTCIGQNLAILQAKLALAIILQRFSFTLAPSYQHAPTVLMLLYPQYGAPITFRTLSTPDQGFVTLFIHELEWWFIIRLVALALLKIYPYS* | 543 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4101564 | 4105064 | + | Vvi11g425 | Vvi11g425 | 771866 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g425 | 542 | Gene3D | Cytochrome P450 | 29 | 508 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi11g425 | 542 | PRINTS | E-class P450 group I signature | 89 | 108 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi11g425 | 542 | PRINTS | E-class P450 group I signature | 204 | 222 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi11g425 | 542 | PRINTS | E-class P450 group I signature | 305 | 322 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi11g425 | 542 | PRINTS | E-class P450 group I signature | 325 | 351 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi11g425 | 542 | PRINTS | E-class P450 group I signature | 445 | 455 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi11g425 | 542 | PRINTS | E-class P450 group I signature | 455 | 478 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi11g425 | 542 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 448 | 457 | IPR017972 | GO:0005506|GO:0016705 | |
Vvi11g425 | 542 | Pfam | Cytochrome P450 | 82 | 488 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi11g425 | 542 | PRINTS | P450 superfamily signature | 316 | 333 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi11g425 | 542 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi11g425 | 542 | PRINTS | P450 superfamily signature | 446 | 455 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi11g425 | 542 | PRINTS | P450 superfamily signature | 455 | 466 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi11g425 | 542 | PANTHER | CYTOCHROMEA2 | 5 | 502 | - | - | |
Vvi11g425 | 542 | SUPERFAMILY | Cytochrome P450 | 38 | 505 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi11g425 | 542 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 5 | 502 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g425 | K15639 | - | vvi:100245678 | 1001.89 |