Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g425 ATGGAGGAGGTGTGGTACTGGTTCAAGCTACTCGTGATATGCTTCATGGCGTTAGTGTTCGTGTTGAAGGTGGTAGTGTTGCTTTGGTGGAGACCCAGAAAGATCGAACACCATTTTTCCAAGCAAGGGATTAGAGGTCCCCCTTATCGTTTCTTCATAGGCAATGTCAAAGAGCTTGTGGGTCTCATGTTGAAGGCTTCTTCTCAACCCATGCCTTTCTCTCACAACATACTCCCCAGAGTTCTCTCCTTCTACCATCACTGGAAGAAAATCTATGGTGCAACATTTCTCGTGTGGTTCGGCCCGACCGTTCGTCTCACCATCTCCGATCCGGACCTTATTCGGGAGATTTTCGCCTCCAAGTCGGAATTCTATGAGAAGAACGAGGCACACCCGCTTGTTAAACAGCTTGAAGGTGATGGGCTGCTGAGCCTCAAAGGCGAAAAATGGGCTCATCATAGGAAAATCATAACACCTACCTTGCACATGGAGAATCTCAAACTGATGGTACCGGTGATGGCGAAGAGCGTGACCGAAATGTTGGAGAAATGGATGGCAATGTCAAAATCAGGTGAGGTAGAGATTGAAGTTTCTGAGTGGTACCAAACATTGACCGAAGATGTCATCACCCGAATGGCATTCGGCAGCAGCTATGAAGATGGTAAGGCCATTTTCCAACTCCAAGCTCAGCAAATGGTCATGGCTGCCGAGGCATTTCAGAAAGTTTTCATCCCCGGCTATAGATTCCTTCCAACCAAAAGAAACATGAATTCTTGGAAATTGGACAAGGAGATAAAGAAATCGCTGGTGAAGCTGATTGATCGGCGAAAGGAGAATAGGTGGAAGGAAAATCCGGAGAAATGTCCAAAAGATTTATTGGGGCTAATGATAGAAGAAACGATTACGGTACAGGACATTGTTGAGGAGTGCAAGAGTTTCTTCTTCGCCGGAAAGCAGACAACCTCCAATCTGCTGACCTGGACTACGGTTCTCCTTGCAATGCACCCACAGTGGCAGGTTCGAGCACGTGACGAGGTTTTCCGTGTGTGCGGAGCACGTGATACACCAACCAAAGATGATGTTGTCAAACTTAAGACGCTAAGCATGATCCTCAATGAGTCCCTGCGCCTCTATCCGCCCATCATCGCAGCCATCAGACGGGCCAAAACGGATGTAGAGCTGGGAGGCTACAAGATCCCCCGTGGGATGGAGCTCCTAATCCCAATCCTAGCCGTTCATCATGATCCCTTGATATGGGGCAATGATGCAAATGAATTCAACCCGGCCCGATTCGCGGAAGGAGTGGCCCGAGCCGCCAAGCATCCGGTGGCGTTCATTCCATTCGGCCTGGGCGTCCGTACATGCATTGGCCAAAATTTAGCCATCTTGCAGGCCAAACTGGCCCTTGCCATAATCCTCCAACGCTTCTCCTTCACTCTTGCCCCCTCCTACCAGCATGCACCAACGGTTTTGATGCTCTTGTACCCTCAGTACGGGGCCCCCATCACCTTTCGAACTTTATCCACACCTGATCAAGGTTTTGTAACATTATTCATTCATGAACTTGAATGGTGGTTTATTATTAGATTAGTCGCTTTGGCCCTCTTAAAAATCTATCCCTACAGCTGA 1629 48.5 MEEVWYWFKLLVICFMALVFVLKVVVLLWWRPRKIEHHFSKQGIRGPPYRFFIGNVKELVGLMLKASSQPMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRLTISDPDLIREIFASKSEFYEKNEAHPLVKQLEGDGLLSLKGEKWAHHRKIITPTLHMENLKLMVPVMAKSVTEMLEKWMAMSKSGEVEIEVSEWYQTLTEDVITRMAFGSSYEDGKAIFQLQAQQMVMAAEAFQKVFIPGYRFLPTKRNMNSWKLDKEIKKSLVKLIDRRKENRWKENPEKCPKDLLGLMIEETITVQDIVEECKSFFFAGKQTTSNLLTWTTVLLAMHPQWQVRARDEVFRVCGARDTPTKDDVVKLKTLSMILNESLRLYPPIIAAIRRAKTDVELGGYKIPRGMELLIPILAVHHDPLIWGNDANEFNPARFAEGVARAAKHPVAFIPFGLGVRTCIGQNLAILQAKLALAIILQRFSFTLAPSYQHAPTVLMLLYPQYGAPITFRTLSTPDQGFVTLFIHELEWWFIIRLVALALLKIYPYS* 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4101564 4105064 + Vvi11g425 Vvi11g425 771866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g425 542 Gene3D Cytochrome P450 29 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g425 542 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g425 542 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g425 542 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g425 542 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g425 542 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g425 542 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g425 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Vvi11g425 542 Pfam Cytochrome P450 82 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g425 542 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g425 542 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g425 542 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g425 542 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g425 542 PANTHER CYTOCHROMEA2 5 502 - -
Vvi11g425 542 SUPERFAMILY Cytochrome P450 38 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g425 542 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 502 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g425 K15639 - vvi:100245678 1001.89