Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g432 | ATGAAAGAACCCTCTATGTTGCGCCGGAGGAGACCCAATTCGTCGAAGAAACTGAAACTCGTTTGCAGCTTCAATGGCCGATTCCAGACGCGTCCGCCCTCTGGTAAGCTTGGTTACGTCGGCGGCGATACTCGTATCATCTCCGTCGACCGAGGCATCGGATTCATGAAACTTCGGTCTAAGATCTCAGAGCTCTGCCCCGATATCCGTTCCTTCTCTCTCAAATACCGCCTTCCCGAGTCGGATCCTGTTCACGGTGACACCACCAATCTCGTTTTGATAGCTTCCGACGACGACGTTCGTTGCATGGTCGATGAGTACGATAAGATGGACTTCTACGGACAGCAAACAAGATTGAGGATTTTCGTTTTCCGTGATAATGGGTATGTTAACGTGAATCTCCCCATGAATTGTATTGAAAACATAAATGATTATGTGTGTGGGAAAAAGGGGTTTGGTGTTGAGGGGAAAGAGACTTGTGTGAAGGGTGTGAGTGATTTTGGTGATTATATTAGTAATGTGTTTCAAAGTCGAAATAGTGGGAGCTATTTGTTTGGACTCCAGTTTGATACTAAGGAAATCAACAATCCGGCGACTGTTGTGGCCGGAGGCCGGTATAGTGATCGTTCACTGAGAAAAGTGATCTTGAAACAACGGTTTTCGGCAAAGAAACCGGCTCCAATTAGCAGTTTTTGCAGTGGGGAAAGGGAATTTAGGCGTTCTGACGAGCAAAAATATTGTTACCCACTTATAGATTTAGCCCCTGAAGCATTAGTCCCAAAGAGTAAACAAACTGCTAATCTGAATTTTGAACACCCGCGTGAAGTGAATATTTTGATTTGCAAAACTGAGGATGCCCTTTCTCCAGGAAATCAAAATTTTGAAAATTTGGTAAGGAATGGAAATACAAGGGTGGATGGGAGTAGTCCCAGGCAGTGTTTGTTGAGGCTGTCTGGGTGTAATGGAGGTGGAATGAATCAAGGCATTTCAAATACATCCAGTGAGGTGGTTCAGTTTCCACAGCTGTCATGTATTTCAAGTATCATTTCGTTGTCAAGTGGTTCTAATGCTAAGCAGGACTTGAGAAACATGGACCCTATGTCATGGACTAATTTCAACAGGAAAAACATGCCATGTCCTGCAAATTATGATTCAGGGAAGATTAGTTTATTGCCGCTTTCTTGCAGCAATGAGATGGTGGGAAGTGCTTCTCCAATGAAAATCCTGTCTGCTAGAGATAGGGCGTTGGGGGGTGATCTTCAGAGTGGCATCCGCAAGCATAGGTTTGGCATGTGTGATACCAGAAATCATCGGATGTGTTTATATCACATACGTAACCATCAGAGTAATCTCTCTGAGATGGGTAGCAATCAAAATTTGAGGTTGGACGGAAGGTCTTGGTCAGGGCGATGCTGTCCTGGGCTCAGACCAAACCCAAACATAGCAAAACAGGGGCAATCTATGAGATCATACCATCCAAATTATTTGAAGCCATTGTCTTGCACACACACCCATACACTGCAAGGATTGATGAGAATGATGGACTCTAGCTTAAATAGTCACTCTTGCTCCCATGATCTCCAATATGCCAATGAGAACATAAGAGACCAGGGTATCCTTGCATCTGAATATGGAAGCCCAAATATTGAGGAATGTAAATTTGCCTACCATGGTGCATATGCTGGCATGGGCAACCCACCCCTCTTGTTTCGTAATGCTGTTGAGAACCCATTGAAGGACGGTTTCTTAACTGATTCTGGTAGTGGGATGCATGAAGTTCCACATCAGAACCCTTACCAGAATTGTCACAGAGTGCTCACAAATTGTGAATCTGGTTGTTATGATTCAAGGCAACCATTCTCATTGAGCCCTCAGAAAGTTGACAATATTTCTGCCTTTCTGAATTATCCAGGTTATAGCCAAGGAACAGAACTGAGATGCAACAGTAAGCTGTCAGATAGGGAAGCAGGTATTGAGTCATTAAGCACTCATCGTGATGGTGCCCATACTTTACAAGGTGGAGTTGCATCTCCAGTTGATCTTTCATTGGGTAATCTTTCATTGTCATCATCCAAAGAAGTGGAACCTCTTGCACTTTCTTCTCATGTTGACATTGATGTTTCTGAAGCCCTACTAAAGTCTCAATCAAAGCATTTGGATCTCATAGATGGACACTCAAGCCCAGAAGCTTACAACTCAAATGGAATGGAATCCGGTTCTCTCACTGGGAATGCAACCAAATTGGGAAATGATTATGTGCATAAAGAAGAAATCCAACTGGACCCTTCATCTGATTTAAGCATTGATGAAAAGAGGGATTTAAGCTTCTTATATTTTTTGCAGACTATAAAAAATACTGACCTGGAATACATAAAAGAACTTGGTTCGGGTACTTATGGAACTGTATCTTATGGAAAATGGAAGGGGTCTGATGTTGCCATTAAGAGGATAAAACCCAGTTGCTTCACAGAAGACACATTGGAGGAGGACCGATTGGTTGCAGAGTTCTGGAAGGAGGCCCACATACTAGGGCAGCTTCACCATCCAAATATTGTGGCATTCTATGGTGTAGTTACAGATGGACCTGTGACAAATTTGGCAACGGTAACAGAATACATGGTGAATGGCTCTCTTAAACAAGTGTTGCAAAAAAAAGATCGAACAATTGATCATCGGAAGAGATTAATTATCGCTATGGATGCAGCCTTTGGTATGGAATATCTACATGGGAAGAACATTGTTCATTTCGATTTAAAGTCTCATAACTTGTTCATGAATATGAGGGATCCTCAGCGACCAGTTTGCAAGATTGGTGATCTGGGCTTGTCAAAAATTAAGCAGAGGACCCTCATCTCTGGTGGGTTACGAGGAACTATACCATGGATGGCTCCAGAACTTTTTAACAGTAAGAATGACTTGGTAACAGAAAAGGTTGATGTATACTCATTTGGAATAGCCATGTGGGAACTCTTGACTGGGGAGGAACCTTATGGAAATAAGATTTGGGTTTTCTTTTTCAGCTGGTATAATCAAAGGCAATCTGCGACCCAAAATTCCAACCTGTGA | 3066 | 42.79 | MKEPSMLRRRRPNSSKKLKLVCSFNGRFQTRPPSGKLGYVGGDTRIISVDRGIGFMKLRSKISELCPDIRSFSLKYRLPESDPVHGDTTNLVLIASDDDVRCMVDEYDKMDFYGQQTRLRIFVFRDNGYVNVNLPMNCIENINDYVCGKKGFGVEGKETCVKGVSDFGDYISNVFQSRNSGSYLFGLQFDTKEINNPATVVAGGRYSDRSLRKVILKQRFSAKKPAPISSFCSGEREFRRSDEQKYCYPLIDLAPEALVPKSKQTANLNFEHPREVNILICKTEDALSPGNQNFENLVRNGNTRVDGSSPRQCLLRLSGCNGGGMNQGISNTSSEVVQFPQLSCISSIISLSSGSNAKQDLRNMDPMSWTNFNRKNMPCPANYDSGKISLLPLSCSNEMVGSASPMKILSARDRALGGDLQSGIRKHRFGMCDTRNHRMCLYHIRNHQSNLSEMGSNQNLRLDGRSWSGRCCPGLRPNPNIAKQGQSMRSYHPNYLKPLSCTHTHTLQGLMRMMDSSLNSHSCSHDLQYANENIRDQGILASEYGSPNIEECKFAYHGAYAGMGNPPLLFRNAVENPLKDGFLTDSGSGMHEVPHQNPYQNCHRVLTNCESGCYDSRQPFSLSPQKVDNISAFLNYPGYSQGTELRCNSKLSDREAGIESLSTHRDGAHTLQGGVASPVDLSLGNLSLSSSKEVEPLALSSHVDIDVSEALLKSQSKHLDLIDGHSSPEAYNSNGMESGSLTGNATKLGNDYVHKEEIQLDPSSDLSIDEKRDLSFLYFLQTIKNTDLEYIKELGSGTYGTVSYGKWKGSDVAIKRIKPSCFTEDTLEEDRLVAEFWKEAHILGQLHHPNIVAFYGVVTDGPVTNLATVTEYMVNGSLKQVLQKKDRTIDHRKRLIIAMDAAFGMEYLHGKNIVHFDLKSHNLFMNMRDPQRPVCKIGDLGLSKIKQRTLISGGLRGTIPWMAPELFNSKNDLVTEKVDVYSFGIAMWELLTGEEPYGNKIWVFFFSWYNQRQSATQNSNL* | 1022 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4194703 | 4202353 | - | Vvi11g432 | Vvi11g432 | 771873 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g432 | 1021 | SMART | serkin_6 | 788 | 1021 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g432 | 1021 | Pfam | PB1 domain | 35 | 125 | IPR000270 | GO:0005515 | |
Vvi11g432 | 1021 | CDD | STKc_MAP3K-like | 794 | 999 | - | - | |
Vvi11g432 | 1021 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 913 | 925 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi11g432 | 1021 | CDD | PB1_UP2 | 21 | 124 | - | - | |
Vvi11g432 | 1021 | ProSitePatterns | Protein kinases ATP-binding region signature. | 794 | 815 | IPR017441 | GO:0005524 | |
Vvi11g432 | 1021 | Pfam | Protein tyrosine and serine/threonine kinase | 788 | 1001 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi11g432 | 1021 | ProSiteProfiles | Protein kinase domain profile. | 788 | 1021 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g432 | 1021 | SMART | PB1_new | 32 | 126 | IPR000270 | GO:0005515 | |
Vvi11g432 | 1021 | Gene3D | Phosphorylase Kinase; domain 1 | 782 | 873 | - | - | |
Vvi11g432 | 1021 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 4 | 999 | - | - | |
Vvi11g432 | 1021 | PANTHER | PROTEIN KINASE, PUTATIVE-RELATED | 4 | 999 | - | - | |
Vvi11g432 | 1021 | SUPERFAMILY | CAD & PB1 domains | 35 | 130 | - | - | |
Vvi11g432 | 1021 | Gene3D | Transferase(Phosphotransferase) domain 1 | 874 | 1019 | - | - | |
Vvi11g432 | 1021 | SUPERFAMILY | Protein kinase-like (PK-like) | 773 | 1000 | IPR011009 | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76051 | PF07714 | PK_Tyr_Ser-Thr | 2.20E-47 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g432 | - | - | vvi:100267909 | 1994.16 |