Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g466 ATGGTGCAAATGGAACCCAAATGGCTGGTTTTGTTGGTAGTGATTCTGGGGTTAAGTTGGTTTGGAGAAACCCAACAAGGATTGATACCCGGGTTTTACTCTTCTTCATGCCCAAAGGCTGAGGCCATAGTCAGTTCTACTGTTGTAACGCATTTCAAGAAGGATCCTACAATTGCAGCGGGCGTTCTCAAGCTTCATTTCAAAGATTGCTTTTTTCAGGGCTGCGATGGTTTAGTAAGTGAGATAGATGCATTGACTGACACAGAAATACGAGGATTTGGTGTGATAGATGACGCCAAAACTCAACTGGAGACCTTGTGCCCCGGGGTGGTATCATGTGCTGATATACTGGCACTTGCTGCTCGTGATGCTGTTGGCTTGAGTGGTGGTCCAAGTTGGCCAGTGCCCACAGGAAGACGAGATGGGAGGCTCTCATTTGGTGTATCCCCGGAGAACCTTACTTTACCTGTTCCTACTGATTCTATTCCTGTCCTAAGAGAGAAGTTTGCTGCTAAAGGCCTCAACAATCACGACCTTGTAACACTAATTGGGGCACACACCATTGGACTAACGGACTGTTCGTCCTTTGAATACCGTCTCTACAACTTCACGGCAAAGGGAAATGCAGACCCAACAATAAACCAAGCTTTCCTGGCTCAGCTGCGAGCCCTTTGTCCTGATGTTGGTGGCGATGTCTCCAAAAAGGGGGTGCCGCTGGATAAAGATAGCCAGTTCAAATTCGATGTCAGTTTCTTCAAGAATGTGCGGGATGGGAATGGAGTCCTGGAGTCCGATCAAAGGCTTTTTGGAGATAGCGAAACCCAGAGAATCGTTAAGAATTATGCTGGTAACGGAAAAGGCTTACTGGGGCTTAGATTTTATTTTGAGTTTCCAAAAGCCATGATTAAAATGAGTAGCATCGGGTCTGCATCTTATTTGTATCTAGTGCCCACAGAAAGACGAGATGGGAGGCTTGTATCTTTATCCCCTGATGCACTTAATTTACTTGCTCTTACTGATTCTATTCATGTCCTAAGGCAGAAGTTTGCTGCTAAAGGCCTCAACAATCATGACCTCGTAACACTAGTTGGGGCACACACCATTGGGCAAACGGACTGTTCGTTCTTCCAATATCGTCTCTACAACTTCATGGAAAAGGGAAATGCAGACCCAACAATAAACCAAGCTTTCCTTGCTCAACTGCATGCCCTTTGTCCCGAATGTGGCAATGTCTCCACAAGGGTGCCACTAGATAAAGATAGCCAGATCAAATTCGATGTGAGTTTCTTCAAGAATGTGCGGGTTGGGAATGGAGTCTTGGAGTCGAATCAAAGGATTTTTGGAGATAGCGAAACCCAGAGGATCGTTAAGAATTATGCCGGTAACAGACGAGAGCCAACTGAGAGTTTTGCTTCTCTTTTCTACTTGTTAATGGTGCAAATGGAACCTAAATGGCTGGTTTTGTTGGCAGTGATTTTAAGTTTGTTTGCAGAAACTCAACAAGGATTGACATCCGGGTTTTACTCTTCTTCATGCCCAAAGGCTGAGGCCACAGTCAGGTCCACTGTTGAAACGCACTTCAAGCAGGATCCTACAATTGCAGCTGGTGTTCTTAGGCTTCATTTCCAAGATTGCTTTGTTCAGGGCTGCGACGCTTCGATACTGATAACTGAGGCTTCAGGTGAGACAGATGCATTGCCCAACGCAGGATTAAGAGGATTTGATGTGATAGATGACGCCAAAACTCAACTGGAGGCCTTGTGCCCCGGGGTGGTATCATGTGCTGATATACTAGCACTAGCTGCTCGTGATGCTGTTGGCTTGAGTGGTGGTCCAAGTTGGTCAGTGCCCACAGGAAGACGAGATGAGACGAACGTATCTTCATCCCCGGATGCCTCTAATTTCCCTGCTCCTAATGATTCTATTCCTGTCCTAAGACAGAAGTTTGCTGATAAAGGCCTCAACACTAATGACCTTGTAACACTAGTTGGGGCACACACCATTGGGCAAACGAACTGTTCGGTCTTCCAATACCGTCTCTACAACTTCACGACAAGGGGAAATGCAGACCCAACAATAAACCCAGCTTTCCTTGCTCAGCTGCAAGCCCTTTGTCCTGAAGGTGGCAATGGCTCCACAAGGGTGGCGCTGGATACAAATAGCCAGACCAAATTCGATGTCAATTTCTTCAAGAATGTGCGGGATGGGAATGGAGTCCTGGAGTCGGATCAAAGGCTTTTTGGAGATAGCGAAACTCGGAAGATCGTTAGGAATTATGCTGGTAACGGAAGAGGCATACTGGGGCTTAGATTTTATATTGAGTTTCCAAAAGCCATGATTAAAATGAGTAGCATCGGGGTCAAGACTGGTACTCAAGGAGAGATTCGAAAGACATGCTCAAAGTCCAATTAA 2412 46.06 MVQMEPKWLVLLVVILGLSWFGETQQGLIPGFYSSSCPKAEAIVSSTVVTHFKKDPTIAAGVLKLHFKDCFFQGCDGLVSEIDALTDTEIRGFGVIDDAKTQLETLCPGVVSCADILALAARDAVGLSGGPSWPVPTGRRDGRLSFGVSPENLTLPVPTDSIPVLREKFAAKGLNNHDLVTLIGAHTIGLTDCSSFEYRLYNFTAKGNADPTINQAFLAQLRALCPDVGGDVSKKGVPLDKDSQFKFDVSFFKNVRDGNGVLESDQRLFGDSETQRIVKNYAGNGKGLLGLRFYFEFPKAMIKMSSIGSASYLYLVPTERRDGRLVSLSPDALNLLALTDSIHVLRQKFAAKGLNNHDLVTLVGAHTIGQTDCSFFQYRLYNFMEKGNADPTINQAFLAQLHALCPECGNVSTRVPLDKDSQIKFDVSFFKNVRVGNGVLESNQRIFGDSETQRIVKNYAGNRREPTESFASLFYLLMVQMEPKWLVLLAVILSLFAETQQGLTSGFYSSSCPKAEATVRSTVETHFKQDPTIAAGVLRLHFQDCFVQGCDASILITEASGETDALPNAGLRGFDVIDDAKTQLEALCPGVVSCADILALAARDAVGLSGGPSWSVPTGRRDETNVSSSPDASNFPAPNDSIPVLRQKFADKGLNTNDLVTLVGAHTIGQTNCSVFQYRLYNFTTRGNADPTINPAFLAQLQALCPEGGNGSTRVALDTNSQTKFDVNFFKNVRDGNGVLESDQRLFGDSETRKIVRNYAGNGRGILGLRFYIEFPKAMIKMSSIGVKTGTQGEIRKTCSKSN* 804
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4611379 4626665 - Vvi11g466 Vvi11g466 771907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g466 803 MobiDBLite consensus disorder prediction 618 636 - -
Vvi11g466 803 Gene3D - 28 158 - -
Vvi11g466 803 MobiDBLite consensus disorder prediction 608 639 - -
Vvi11g466 803 PRINTS Haem peroxidase superfamily signature 534 548 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 PRINTS Haem peroxidase superfamily signature 592 609 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 PRINTS Haem peroxidase superfamily signature 610 622 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 PRINTS Haem peroxidase superfamily signature 658 673 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 PRINTS Haem peroxidase superfamily signature 718 733 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 SUPERFAMILY Heme-dependent peroxidases 503 803 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 Gene3D Peroxidase, domain 2 636 782 - -
Vvi11g466 803 SUPERFAMILY Heme-dependent peroxidases 28 309 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 CDD plant_peroxidase_like 194 481 - -
Vvi11g466 803 PRINTS Plant peroxidase signature 512 531 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 PRINTS Plant peroxidase signature 536 556 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 PRINTS Plant peroxidase signature 572 585 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 PRINTS Plant peroxidase signature 591 601 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 PRINTS Plant peroxidase signature 610 625 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 PRINTS Plant peroxidase signature 657 669 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 PRINTS Plant peroxidase signature 716 731 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 PRINTS Plant peroxidase signature 732 749 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 PRINTS Plant peroxidase signature 777 790 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 CDD secretory_peroxidase 502 801 IPR033905 GO:0004601|GO:0042744
Vvi11g466 803 ProSiteProfiles Plant heme peroxidase family profile. 323 481 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 PANTHER PEROXIDASE 493 801 - -
Vvi11g466 803 PANTHER PEROXIDASE 314 481 - -
Vvi11g466 803 PANTHER PEROXIDASE 14 308 - -
Vvi11g466 803 CDD secretory_peroxidase 27 308 IPR033905 GO:0004601|GO:0042744
Vvi11g466 803 SUPERFAMILY Heme-dependent peroxidases 316 481 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 ProSitePatterns Peroxidases proximal heme-ligand signature. 658 668 IPR019793 -
Vvi11g466 803 ProSiteProfiles Plant heme peroxidase family profile. 502 803 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 Gene3D Peroxidase, domain 2 337 481 - -
Vvi11g466 803 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Vvi11g466 803 PANTHER PEROXIDASE 25-RELATED 14 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 PANTHER PEROXIDASE 25-RELATED 493 801 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 PANTHER PEROXIDASE 25-RELATED 314 481 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 Gene3D - 506 803 - -
Vvi11g466 803 Pfam Peroxidase 45 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 Pfam Peroxidase 519 761 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 Pfam Peroxidase 316 461 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g466 803 Gene3D Peroxidase, domain 2 159 304 - -
Vvi11g466 803 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g466 K00430 - vvi:100855242 654.055