Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g470 ATGGAACCCAAATGGCTGGTTGTGTTGGTAGTGATTCTGGGGTTAAATTGGTTAGCAGAAACCCAAGAAGGATTGAAAACCGGGTTTTACTCTTCTTCATGCCCAAAGGCTGAGGCCATAGTCAGGTCTACTGTTGAATCTCACTTCAACAAGGATCCTACAATTGCAGCTGGTGTTCTCAGGCTTCATTTCCATGATTGCTTTGTTCAGGGCTGCGATGGTTCGGTACTGATAACTGGGGCTTCTGCTGAGAGAAATGCATTGCCCAACCTAGGATTAAGAGGATTCGATGTGATAGACGACGCCAAAACTCAACTGGAGGCCTCGTGCCCCGGGGTGGTATCATGTGCTGATATACTAGCACTAGCTGCTCGCGATGCTGTAGACTTGAGTGATGGTCCAAGTTGGTCAGTGCCCACAGGAAGACGAGATGGGAGGATCTCTTCCTCCTCGGAAGCCTCAAACTTACCTTCTCCTGCTGATTCTATTGCTGTCCAAAGACAGAAGTTTGCTGCCAAAGGCCTCGACAATCATGACCTTGTAACACTAGTTGGGGCACATACCATTGGGCAAACGGGCTGTTTGTTCTTCCGATACCGTCTCTACAACTTCACACCAACGGGAAATGCAGACCCAACAATAAACCAAGCATTTCTTGCTCAGCTGCAAGCCCTTTGTCCTAAAGATGGCGATGGCTCCAAAAGGGTGGCACTGGATAAAGATAGCCAGACCAAATTCGATGTCAGTTTCTTCAAGAATGTGCGGGCTGGGAATGGAGTTCTCGAGTCAGATCAAAGGCTTTTAGGAGATGGCGAAACCCAGAGGATCGTTCAGAATTATGCTGGCAGCGTACGAGGCTTACTGGGGGTTAGATTTGATTTCGAGTTTCCAAAAGCCATGATTAAAATGAGTAGCATCGAGGTGAAGACCGGGGCACAAGGAGAGATTCGAAAGATATGCTCAAAGTTCAATTAA 975 47.59 MEPKWLVVLVVILGLNWLAETQEGLKTGFYSSSCPKAEAIVRSTVESHFNKDPTIAAGVLRLHFHDCFVQGCDGSVLITGASAERNALPNLGLRGFDVIDDAKTQLEASCPGVVSCADILALAARDAVDLSDGPSWSVPTGRRDGRISSSSEASNLPSPADSIAVQRQKFAAKGLDNHDLVTLVGAHTIGQTGCLFFRYRLYNFTPTGNADPTINQAFLAQLQALCPKDGDGSKRVALDKDSQTKFDVSFFKNVRAGNGVLESDQRLLGDGETQRIVQNYAGSVRGLLGVRFDFEFPKAMIKMSSIEVKTGAQGEIRKICSKFN* 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4652341 4653819 - Vvi11g470 Vvi11g470 771911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g470 324 MobiDBLite consensus disorder prediction 142 159 - -
Vvi11g470 324 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Vvi11g470 324 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601|GO:0042744
Vvi11g470 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Vvi11g470 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 PANTHER PEROXIDASE 25-RELATED 11 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 Gene3D Peroxidase, domain 2 157 303 - -
Vvi11g470 324 SUPERFAMILY Heme-dependent peroxidases 25 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 PANTHER PEROXIDASE 11 322 - -
Vvi11g470 324 Gene3D - 28 324 - -
Vvi11g470 324 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 Pfam Peroxidase 41 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi11g470 324 MobiDBLite consensus disorder prediction 130 159 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g470 K00430 - vvi:100262758 645.966