Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g48 | ATGGCACTCTCCATTGCTTCTACGGCATTTTCTAGCCTTCCAACCAGGGAAGTATCTTCAAAACATTTTCCACGAAAACTGACAACATGGTTACCAGGAAGAGTTCGTTTGAATGCAACAAAAGGGGTATCTAGTGTTTGTGAACCACTTCCTCCCGACAGGCCATTGTGGTTCCCTGGTAGCTCACCTCCTGAGTGGCTTGATGGCAGTCTTCCTGGTGATTTTGGCTTCGACCCGCTTGGATTAGGGTCTGATCCGGAGTTACTTCGATGGTTTGCACAAGCTGAGCTGATGCACAGCAGATGGGCAATGCTTGCTGTAGCTGGGATTCTCATTCCAGAGTGCCTTGAGAGACTAGGCTTCATTGAGAATTTCTCCTGGTATGATGCTGGAGCCCAGGAGTTCTTTGCAGATCCCACAACCTTATTTGTTGTACAGTTAGCTTTGATGGGCTGGGTGGAGGGAAGAAGATGGGCTGATTTGATAAACCCTGGGTGTGTTGACATACAGCTCACGTTTCCAAATAAAGCAAAGCCAAAGCCTGATGTTGGATACCCGGGTGGCCTTTGGTTTGATCCCTTCATGTGGGGAAGAGGGTCTCCAGAGCCTGTGATGGTGCTAAGGACCAAGGAGATCAAGAACGGGCGTCTTGCAATGCTAGCTTTCGTGGGGTTCTGTTTCCAAGCCATTTATACTGGGGAAGGCCCCATTGAAAACTTGATGGCACATATTGCAGACCCTGGCCACTGCAATGTTTTCTCGGCTTTCACATCACAGTGA | 780 | 48.85 | MALSIASTAFSSLPTREVSSKHFPRKLTTWLPGRVRLNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLRWFAQAELMHSRWAMLAVAGILIPECLERLGFIENFSWYDAGAQEFFADPTTLFVVQLALMGWVEGRRWADLINPGCVDIQLTFPNKAKPKPDVGYPGGLWFDPFMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGEGPIENLMAHIADPGHCNVFSAFTSQ* | 260 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 701294 | 703811 | + | Vvi11g48 | Vvi11g48 | 771489 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g48 | 259 | Pfam | Chlorophyll A-B binding protein | 63 | 229 | IPR022796 | - | |
Vvi11g48 | 259 | SUPERFAMILY | Chlorophyll a-b binding protein | 53 | 258 | - | - | |
Vvi11g48 | 259 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 256 | IPR001344 | GO:0009765|GO:0016020 | |
Vvi11g48 | 259 | Gene3D | Chlorophyll a/b binding protein domain | 64 | 249 | - | - | |
Vvi11g48 | 259 | PANTHER | PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC | 1 | 256 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g48 | K08908 | - | vvi:100268126 | 549.666 |