Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g480 ATGAAAAAGGTCACGAGAAAGGTCGGAAAGTATGAGGTCGGCCGAACAATTGGCGAAGGAACTTTCGCCAAGGTTAAATTTGCGCACAACACCGAGACTGGGGAGAGCGTAGCTATGAAGGTTATGGCAAAGTCCACCATTCTTAAGCATAGGATGGTCGATCAGATTAAACAAGAGATATCCATAATGAAGATTGTCAGGCACCCTAACATAGTTAGATTGCATGAGGTCTTGGCCAGCCAGACAACGATATATATTATTCTTGAGTTTGTCACTGGAGGAGAACTATATGATAAAATTGTTCACCAAGGAAGACTCTCTGAAAATGAATCCAGGCGATACTTTCAGCAGCTTATAGATGCTGTATCACATTGTCACAGTAAGGGTGTGTACCACAGAGATCTGAAGCCTGAAAATCTACTTCTTGATTCGAATGGAAATTTGAAGGTTTCTGATTTTGGACTTAGTGCATTGCCTAAACAAGGGGTTGGACTTCTTCATACCACATGTGGAACCCCAAATTATGTTGCACCTGAGGTGCTTAGTAACCAAGGTTATGACGGTGCAGCTGCTGATGTGTGGTCATGTGGAGTCATTCTCTATGTTCTAATGGCAGGATATCTTCCATTTAATGAGATAGACCTTCCAAGCTTGTACAAAAAGATCAATGCTGCAGAGTTTTCCTGTCCATTTTGGTTTTCTTCTGGATCAAAGTCGTTACTATGTAGGATACTTGATTCCAATCCGAAAACTCGTATTCGGATTGAAGGGATAAAAAATGATCCATGGTTTCGAAAGAACTACGTGTCTAGCAAATGTAGAGAAGATGAAGAAGTGAATTTGGATGATATTCATGCGGTTTTTGATGATATTGAGGAAAATTACGTATCTGAGCAGTCAGGAAATAATGACACAGGTCCTTTGATAATGAATGCATTTGAGATGATTACCCTATCCCAAGGGTTGAATCTATCAGCACTTTTTGACAGACGACAGGATTATGTAAAACGGCAAACTCGTTTTGTTTCCCGCGAACCAGCAAAAGTTATAATTTCTACTATTGAAGCTGTGGCAGAATCTATGAATTTCAAGGTCCATACACGCCACTACAAGACAAGACTCGAGGGAATATCTGCAAATAAGACTGCACAATTTGCAGTTGTCCTAGAGGTTTTTGAAGTTGCACCATCCCTTTTCATGGTGGATGTTAGAAAGGCTGCTGGGGATACACTTGAATATCACAAGTTTTACAAGAATTTCTGTGCTAAACTTGAGCATATCATCTGGAAACCAAAAGAGGCTATGACAAATTCCAGTCTTCTAAGAACAATGACTTGCTGA 1341 40.27 MKKVTRKVGKYEVGRTIGEGTFAKVKFAHNTETGESVAMKVMAKSTILKHRMVDQIKQEISIMKIVRHPNIVRLHEVLASQTTIYIILEFVTGGELYDKIVHQGRLSENESRRYFQQLIDAVSHCHSKGVYHRDLKPENLLLDSNGNLKVSDFGLSALPKQGVGLLHTTCGTPNYVAPEVLSNQGYDGAAADVWSCGVILYVLMAGYLPFNEIDLPSLYKKINAAEFSCPFWFSSGSKSLLCRILDSNPKTRIRIEGIKNDPWFRKNYVSSKCREDEEVNLDDIHAVFDDIEENYVSEQSGNNDTGPLIMNAFEMITLSQGLNLSALFDRRQDYVKRQTRFVSREPAKVIISTIEAVAESMNFKVHTRHYKTRLEGISANKTAQFAVVLEVFEVAPSLFMVDVRKAAGDTLEYHKFYKNFCAKLEHIIWKPKEAMTNSSLLRTMTC* 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4753253 4787694 - Vvi11g480 Vvi11g480 771921

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g480 446 ProSiteProfiles Protein kinase domain profile. 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g480 446 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g480 446 SUPERFAMILY Protein kinase-like (PK-like) 8 282 IPR011009 -
Vvi11g480 446 ProSitePatterns Protein kinases ATP-binding region signature. 17 49 IPR017441 GO:0005524
Vvi11g480 446 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Vvi11g480 446 Pfam NAF domain 307 366 IPR004041 GO:0007165
Vvi11g480 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Vvi11g480 446 Gene3D Kinase associated domain 1, KA1 304 430 - -
Vvi11g480 446 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Vvi11g480 446 CDD CIPK_C 311 421 - -
Vvi11g480 446 Gene3D Transferase(Phosphotransferase) domain 1 91 272 - -
Vvi11g480 446 SMART serkin_6 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g480 446 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 4 442 - -
Vvi11g480 446 PANTHER - 4 442 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g480 - - - vvi:100262837 892.108
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi11g480 . . . . Bpe01g00745 . . . Cmo10g00582 . . . . . . . Cpe18g00496 Bhi02g00982 . . . . . . . . . . . . . . . Cone4ag0668 Cone7ag0630 Lsi06g00977 . . Cme02g01197 . Blo14g00768 Bda02g00217 . Bpe08g00623 . . . . . . Cma10g00544 . Car10g00504 . . . . . . . . . . Cla06g01118 . . . . . . . Csa01g02020 Chy02g02012 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Vvi5g262 . 34 387 CBL-interacting serine-threonine protein kinases AT3G17510 71.3 3.5e-143 505.0
Vvi6g908 ECH 78 427 CBL-interacting serine-threonine protein kinases AT3G17510 51.1 2.0e-98 356.3
Vvi15g629 . 76 427 CBL-interacting serine-threonine protein kinases AT3G17510 50.8 5.5e-96 348.2
Vvi14g1585 . 90 278 CBL-interacting serine-threonine protein kinases AT3G17510 51.0 3.5e-50 196.1
Vvi8g370 ECH 1 362 CBL-interacting serine-threonine protein kinases AT5G07070 55.9 1.4e-128 456.8
Vvi15g629 . 12 429 CBL-interacting serine-threonine protein kinases AT5G07070 52.3 1.3e-123 440.3
Vvi10g470 . 14 445 CBL-interacting serine-threonine protein kinases AT5G07070 53.2 5.1e-123 438.3
Vvi6g908 ECH 12 429 CBL-interacting serine-threonine protein kinases AT5G07070 51.5 1.5e-119 426.8
Vvi11randomg9 . 10 368 CBL-interacting serine-threonine protein kinases AT5G07070 50.1 7.6e-111 397.9
Vvi13g140 ECH 1 219 CBL-interacting serine-threonine protein kinases AT5G07070 61.0 7.4e-90 328.2
Vvi6g908 ECH 5 411 CBL-interacting serine-threonine protein kinases AT2G26980 83.5 2.2e-197 685.3
Vvi15g629 . 9 391 CBL-interacting serine-threonine protein kinases AT2G26980 70.1 1.6e-158 556.2
Vvi10g470 . 11 418 CBL-interacting serine-threonine protein kinases AT2G26980 68.3 4.2e-156 548.1
Vvi11g480 . 2 411 CBL-interacting serine-threonine protein kinases AT2G26980 56.6 3.1e-130 462.2
Vvi18g555 . 5 414 CBL-interacting serine-threonine protein kinases AT2G26980 55.3 3.5e-126 448.7
Vvi11g1070 . 7 406 CBL-interacting serine-threonine protein kinases AT2G26980 50.2 1.7e-109 393.3
Vvi5g262 . 14 365 CBL-interacting serine-threonine protein kinases AT2G26980 52.5 6.6e-101 364.8
Vvi14g1585 . 25 278 CBL-interacting serine-threonine protein kinases AT2G26980 52.5 3.7e-75 279.3
Vvi5g593 . 43 413 CBL-interacting serine-threonine protein kinases AT4G14580 50.8 8.1e-107 384.4
Vvi9g776 . 9 417 CBL-interacting serine-threonine protein kinases AT5G10930 61.8 5.6e-151 531.2
Vvi10g470 . 9 436 CBL-interacting serine-threonine protein kinases AT5G10930 51.4 1.3e-120 430.3
Vvi15g629 . 7 429 CBL-interacting serine-threonine protein kinases AT5G10930 50.2 5.1e-112 401.7
Vvi8g375 ECH 45 320 CBL-interacting serine-threonine protein kinases AT5G10930 51.4 1.8e-85 313.5
Vvi13g140 ECH 1 230 CBL-interacting serine-threonine protein kinases AT5G10930 52.0 2.7e-76 283.1
Vvi11randomg9 . 2 374 CBL-interacting serine-threonine protein kinases AT4G30960 68.3 3.3e-159 558.5
Vvi10g470 . 5 438 CBL-interacting serine-threonine protein kinases AT4G30960 55.8 1.2e-132 470.3
Vvi15g629 . 11 431 CBL-interacting serine-threonine protein kinases AT4G30960 54.0 1.8e-125 446.4
Vvi6g908 ECH 11 429 CBL-interacting serine-threonine protein kinases AT4G30960 53.8 6.8e-125 444.5
Vvi9g776 . 15 412 CBL-interacting serine-threonine protein kinases AT4G30960 52.0 9.6e-119 424.1
Vvi10g228 . 7 350 CBL-interacting serine-threonine protein kinases AT4G30960 51.8 8.4e-115 411.0
Vvi8g370 ECH 7 362 CBL-interacting serine-threonine protein kinases AT4G30960 52.1 3.0e-112 402.5
Vvi11g480 . 9 429 CBL-interacting serine-threonine protein kinases AT4G30960 50.1 3.3e-111 399.1
Vvi13g140 ECH 11 218 CBL-interacting serine-threonine protein kinases AT4G30960 57.0 6.1e-81 298.5
Vvi18g555 . 2 395 CBL-interacting serine-threonine protein kinases AT4G24400 80.7 4.4e-182 634.4
Vvi11g480 . 4 390 CBL-interacting serine-threonine protein kinases AT4G24400 69.5 1.5e-158 556.2
Vvi6g908 ECH 6 390 CBL-interacting serine-threonine protein kinases AT4G24400 59.5 7.1e-132 467.6
Vvi10g470 . 11 397 CBL-interacting serine-threonine protein kinases AT4G24400 59.8 2.7e-131 465.7
Vvi15g629 . 9 390 CBL-interacting serine-threonine protein kinases AT4G24400 58.4 1.1e-129 460.3
Vvi11g1070 . 3 368 CBL-interacting serine-threonine protein kinases AT4G24400 51.2 6.7e-106 381.3
Vvi14g1585 . 22 277 CBL-interacting serine-threonine protein kinases AT4G24400 51.0 1.4e-74 277.3
Vvi8g469 ECH 75 345 CBL-interacting serine-threonine protein kinases AT4G24400 50.5 7.5e-73 271.6
Vvi15g629 . 4 441 CBL-interacting serine-threonine protein kinases AT1G01140 78.3 2.4e-202 701.8
Vvi10g470 . 9 445 CBL-interacting serine-threonine protein kinases AT1G01140 70.9 8.1e-182 633.6
Vvi6g908 ECH 4 439 CBL-interacting serine-threonine protein kinases AT1G01140 68.6 2.4e-173 605.5
Vvi11g480 . 7 434 CBL-interacting serine-threonine protein kinases AT1G01140 55.2 6.7e-136 481.1
Vvi18g555 . 6 434 CBL-interacting serine-threonine protein kinases AT1G01140 54.8 2.9e-131 465.7
Vvi11g1070 . 7 416 CBL-interacting serine-threonine protein kinases AT1G01140 50.8 5.2e-112 401.7
Vvi5g262 . 14 380 CBL-interacting serine-threonine protein kinases AT1G01140 51.3 1.5e-106 383.6
Vvi10g228 . 36 349 CBL-interacting serine-threonine protein kinases AT1G01140 53.9 1.6e-100 363.6
Vvi8g370 ECH 1 362 CBL-interacting serine-threonine protein kinases AT5G58380 56.5 3.9e-134 475.3
Vvi10g470 . 14 444 CBL-interacting serine-threonine protein kinases AT5G58380 53.7 9.4e-128 454.1
Vvi15g629 . 12 440 CBL-interacting serine-threonine protein kinases AT5G58380 51.3 3.3e-125 445.7
Vvi6g908 ECH 12 437 CBL-interacting serine-threonine protein kinases AT5G58380 51.6 6.3e-124 441.4
Vvi13g140 ECH 1 219 CBL-interacting serine-threonine protein kinases AT5G58380 63.2 5.7e-93 338.6
Vvi6g746 ECH 1 402 CBL-interacting serine-threonine protein kinases AT2G30360 60.6 1.3e-139 493.4
Vvi8g375 ECH 18 395 CBL-interacting serine-threonine protein kinases AT2G30360 55.0 2.4e-122 436.0
Vvi10g470 . 4 426 CBL-interacting serine-threonine protein kinases AT4G18700 53.7 4.6e-130 461.8
Vvi15g629 . 10 416 CBL-interacting serine-threonine protein kinases AT4G18700 53.1 8.1e-127 451.1
Vvi6g908 ECH 10 419 CBL-interacting serine-threonine protein kinases AT4G18700 50.7 3.2e-123 439.1
Vvi6g746 ECH 16 395 CBL-interacting serine-threonine protein kinases AT4G18700 51.8 5.6e-120 428.3
Vvi8g375 ECH 26 395 CBL-interacting serine-threonine protein kinases AT4G18700 52.2 5.6e-120 428.3
Vvi10g229 . 99 346 CBL-interacting serine-threonine protein kinases AT4G18700 61.2 1.2e-106 384.0
Vvi13g140 ECH 7 220 CBL-interacting serine-threonine protein kinases AT4G18700 53.4 3.1e-78 289.7
Vvi8g375 ECH 31 396 CBL-interacting serine-threonine protein kinases AT5G01820 61.0 9.9e-140 493.8
Vvi6g746 ECH 22 402 CBL-interacting serine-threonine protein kinases AT5G01820 58.4 7.8e-137 484.2
Vvi6g908 ECH 3 405 CBL-interacting serine-threonine protein kinases AT5G01820 50.7 1.5e-108 390.2
Vvi15g629 . 12 428 CBL-interacting serine-threonine protein kinases AT5G01810 51.2 3.1e-110 395.6
Vvi6g908 ECH 12 428 CBL-interacting serine-threonine protein kinases AT5G01810 50.5 5.0e-108 388.3
Vvi8g370 ECH 1 364 CBL-interacting serine-threonine protein kinases AT5G01810 51.3 1.1e-107 387.1
Vvi13g140 ECH 1 219 CBL-interacting serine-threonine protein kinases AT5G01810 58.4 5.3e-86 315.1
Vvi8g375 ECH 48 280 CBL-interacting serine-threonine protein kinases AT5G01810 55.7 1.6e-85 313.5
Vvi9g776 . 14 415 CBL-interacting serine-threonine protein kinases AT2G25090 58.6 4.0e-139 491.9
Vvi5g262 . 44 389 CBL-interacting serine-threonine protein kinases AT1G48260 68.3 1.1e-133 473.4
Vvi14g1585 . 100 278 CBL-interacting serine-threonine protein kinases AT1G48260 51.1 2.4e-48 189.9
Vvi10g470 . 12 439 CBL-interacting serine-threonine protein kinases AT5G45810 52.9 1.6e-127 453.4
Vvi15g629 . 10 416 CBL-interacting serine-threonine protein kinases AT5G45810 50.8 1.2e-122 437.2
Vvi6g908 ECH 10 416 CBL-interacting serine-threonine protein kinases AT5G45810 50.2 3.8e-121 432.2
Vvi8g375 ECH 45 395 CBL-interacting serine-threonine protein kinases AT5G45810 50.8 3.9e-113 405.6
Vvi10g229 . 99 346 CBL-interacting serine-threonine protein kinases AT5G45810 59.6 2.6e-101 366.3
Vvi13g140 ECH 3 220 CBL-interacting serine-threonine protein kinases AT5G45810 52.2 2.6e-77 286.6
Vvi10g228 . 1 365 CBL-interacting serine-threonine protein kinases AT5G45820 56.3 5.9e-137 484.6
Vvi10g470 . 5 437 CBL-interacting serine-threonine protein kinases AT5G45820 56.6 1.7e-136 483.0
Vvi15g629 . 12 434 CBL-interacting serine-threonine protein kinases AT5G45820 54.8 1.1e-130 463.8
Vvi9g776 . 9 427 CBL-interacting serine-threonine protein kinases AT5G45820 54.2 1.2e-129 460.3
Vvi8g370 ECH 1 362 CBL-interacting serine-threonine protein kinases AT5G45820 56.1 3.4e-124 442.2
Vvi6g908 ECH 12 430 CBL-interacting serine-threonine protein kinases AT5G45820 52.9 5.8e-124 441.4
Vvi11randomg9 . 12 368 CBL-interacting serine-threonine protein kinases AT5G45820 54.8 6.4e-123 438.0
Vvi13g140 ECH 1 220 CBL-interacting serine-threonine protein kinases AT5G45820 58.5 3.5e-89 325.9
Vvi11g1070 . 87 421 CBL-interacting serine-threonine protein kinases AT5G57630 64.6 1.2e-113 406.8
Vvi8g469 ECH 156 332 CBL-interacting serine-threonine protein kinases AT5G57630 50.6 9.8e-44 174.5
Vvi8g375 ECH 45 396 CBL-interacting serine-threonine protein kinases AT2G38490 54.5 3.4e-113 405.6
Vvi6g746 ECH 18 398 CBL-interacting serine-threonine protein kinases AT2G38490 52.5 5.5e-111 398.3
Vvi10g470 . 82 451 CBL-interacting serine-threonine protein kinases AT1G30270 85.4 1.0e-185 646.4
Vvi6g908 ECH 80 437 CBL-interacting serine-threonine protein kinases AT1G30270 73.1 3.7e-151 531.6
Vvi15g629 . 80 437 CBL-interacting serine-threonine protein kinases AT1G30270 71.2 1.8e-150 529.3
Vvi11g480 . 78 430 CBL-interacting serine-threonine protein kinases AT1G30270 60.2 1.1e-121 433.7
Vvi18g555 . 77 442 CBL-interacting serine-threonine protein kinases AT1G30270 54.9 1.6e-114 409.8
Vvi10g228 . 34 349 CBL-interacting serine-threonine protein kinases AT1G30270 56.0 7.1e-102 367.9
Vvi5g262 . 36 380 CBL-interacting serine-threonine protein kinases AT1G30270 52.3 1.2e-101 367.1
Vvi11g1070 . 77 437 CBL-interacting serine-threonine protein kinases AT1G30270 50.4 7.4e-91 331.3
Vvi11g480 . 1 371 CBL-interacting serine-threonine protein kinases AT5G35410 77.9 5.0e-169 590.9
Vvi18g555 . 4 377 CBL-interacting serine-threonine protein kinases AT5G35410 66.6 5.4e-147 517.7
Vvi6g908 ECH 5 372 CBL-interacting serine-threonine protein kinases AT5G35410 62.1 1.0e-129 460.3
Vvi10g470 . 11 379 CBL-interacting serine-threonine protein kinases AT5G35410 61.1 6.6e-129 457.6
Vvi15g629 . 9 372 CBL-interacting serine-threonine protein kinases AT5G35410 58.7 9.9e-125 443.7
Vvi11g1070 . 7 366 CBL-interacting serine-threonine protein kinases AT5G35410 51.1 2.5e-104 375.9
Vvi5g262 . 14 323 CBL-interacting serine-threonine protein kinases AT5G35410 52.8 1.4e-91 333.6
Vvi9g776 . 15 417 CBL-interacting serine-threonine protein kinases AT5G25110 65.7 9.5e-160 560.5
Vvi10g470 . 9 436 CBL-interacting serine-threonine protein kinases AT5G25110 51.6 3.2e-123 439.1
Vvi15g629 . 7 429 CBL-interacting serine-threonine protein kinases AT5G25110 50.5 9.9e-117 417.5
Vvi6g908 ECH 12 434 CBL-interacting serine-threonine protein kinases AT5G25110 50.1 1.9e-115 413.3
Vvi13g140 ECH 7 230 CBL-interacting serine-threonine protein kinases AT5G25110 51.1 4.5e-77 285.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001546 2 7 2 2 2 2 3 2 2 2 2 1 3 2 2 3 2 2 3 2 2 2 2 2 2 2 2 0 0 2 64
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76053 PF00069 Pkinase 2.10E-70 CL0016 Vvi PK