Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g49 ATGGCCGCTGTTCGTCTTCTTCTCAGGTCTCACCTTCTTATCTTCTTCTTCCTCTTCCTTTCCTTCTTCCCTCTTTCCCTCTCCTTGTCAGAGAATGAGGCTCTCCTCAAACTCAAGAAATCTTTGGTCCATACTGGCGCTCTTGATTCTTGGGTTCCCAGCTCTAATCCTTGCCAGGGCCCATGGGATGGGCTCATCTGTTTAAATGGCATTGTCACTGGTCTCCGTCTTGGGAGTATGGATCTTTCCGGGAACATCGACGTTGACGCGTTGATTGACATCCGTGGCCTTCGGACTATCAGTCTTACCAACAATTCATTCTCTGGTCCACTGCCGGCGTTTAATCGTCTCGGTTCTTTGAAGGAGATCGAGAAATCCAAGATCAACATCTCAAAGGTCATGACCATGGCGGGGATAGCATTCTTAATGATAGCCCTCTTGGTCTTCACGTCGCTCGTTTCGTCGAGCCGCAGAAAGGAGGAGTTCAACATTCTGGGCAAAGAGAACCTGGACGAGGTGGTGGAAATACAAGTATCAGGGTCGACCCGAAAGGGAGCCGATTCGTTGAAGAAAGCAAACGGATCAAGCCGGAGAGGGTCCCAGCACGGGCGGGCCAGCGTGAGCGATCTGGTGATGATAAACGACGAGAAGGGTTCCTTTGGGTTGCCGGATTTGATGAAAGCCGCGGCTGAGGTTCTGGGTAACGGTGGGTTGGGGTCGGCGTACAAGGCAGTGATGGCGAATGGCCTGGCGGTGGTGGTGAAGAGGATGAGGGAGATAAATAGATTGGGAAGAGATAGCTTTGACGCCCAGATCAGAAAGATTGGGAGACTACGCCATGAAAACATACTGACTCCATTGGCTTACCATTACAGGAAAGAGGAGAAGCTGCTGATCTCCGAATACGTTCCCAAAGGCAGCCTACTCTACGTCATGCATGGTGACCGTGGAATTTCTCATTCTGAGCTCAACTGGCCGACCCGATTGAAGATCATACAGGGAATAGCCAGTGGGATGAATTTCCTCCACTCCGAATTCGCATCCTTGGACCTGCCCCATGGAAATCTCAAGTCCAGCAACATTCTTCTCGATGAACACTACGTACCACTTCTCACAGACTACGCCTTTTATCCATTAGTCAATGCGACCCAAGCCTCCCAAGCCATGTTCGCATACAGGGCTCAAGACCAACATGTTTCCCCCAAGTGTGACGTCTACTGTCTGGGAATCGTCATTCTTGAAATCATTACTGGGAAATTCCCCTCCCAGTATCTCAGCAATGGCAAGGGAGGAACTGACGTTGTCCAGTGGGTCAAATCCGCCATTGAAGAGAACAGAGAGACGGAGCTGATAGACCCAGAGATAGCAAGTGAAGCTTCAGAAAGGGAGATGCAGCGGCTCCTCCAGATCGCCGCTGAATGCACTGAAAGCAACCCTGAAAATCGACTAGACATGAAGGAAGCCATTAGGAGGATACAGGAGATAAAAACAGCACAAGGTTCAGTTCTTAATGTGTCATATACTAACTTTTCATACAGATTTGAGTTTTGTTCTTGCAATTCTTCAGATTGCCAAGTTGTGAATTCTGTTCATTATCATTTCTTAATTTCAATGTTTTTTTTTATTCTTAATTTCGCTACCATTCACCAGTCTGATTTACTGTCATAG 1668 48.26 MAAVRLLLRSHLLIFFFLFLSFFPLSLSLSENEALLKLKKSLVHTGALDSWVPSSNPCQGPWDGLICLNGIVTGLRLGSMDLSGNIDVDALIDIRGLRTISLTNNSFSGPLPAFNRLGSLKEIEKSKINISKVMTMAGIAFLMIALLVFTSLVSSSRRKEEFNILGKENLDEVVEIQVSGSTRKGADSLKKANGSSRRGSQHGRASVSDLVMINDEKGSFGLPDLMKAAAEVLGNGGLGSAYKAVMANGLAVVVKRMREINRLGRDSFDAQIRKIGRLRHENILTPLAYHYRKEEKLLISEYVPKGSLLYVMHGDRGISHSELNWPTRLKIIQGIASGMNFLHSEFASLDLPHGNLKSSNILLDEHYVPLLTDYAFYPLVNATQASQAMFAYRAQDQHVSPKCDVYCLGIVILEIITGKFPSQYLSNGKGGTDVVQWVKSAIEENRETELIDPEIASEASEREMQRLLQIAAECTESNPENRLDMKEAIRRIQEIKTAQGSVLNVSYTNFSYRFEFCSCNSSDCQVVNSVHYHFLISMFFFILNFATIHQSDLLS* 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 704009 706403 + Vvi11g49 Vvi11g49 771490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g49 555 Gene3D Phosphorylase Kinase; domain 1 194 302 - -
Vvi11g49 555 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 129 501 - -
Vvi11g49 555 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 123 - -
Vvi11g49 555 Gene3D Ribonuclease Inhibitor 30 138 IPR032675 -
Vvi11g49 555 MobiDBLite consensus disorder prediction 185 203 - -
Vvi11g49 555 Pfam Protein kinase domain 231 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g49 555 SUPERFAMILY L domain-like 29 131 - -
Vvi11g49 555 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 123 - -
Vvi11g49 555 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 129 501 - -
Vvi11g49 555 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Vvi11g49 555 SUPERFAMILY Protein kinase-like (PK-like) 231 514 IPR011009 -
Vvi11g49 555 MobiDBLite consensus disorder prediction 185 204 - -
Vvi11g49 555 ProSiteProfiles Protein kinase domain profile. 227 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g49 555 Gene3D Transferase(Phosphotransferase) domain 1 303 513 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi9g66 Vvi11g49 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76054 PF00069 Pkinase 7.40E-25 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g49 - - vvi:109121417 729.554