Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g556 ATGGCGATTCTGTCAGATCTCGGCACTGAGATCTTGGTTCCGGCCTGCGCCATCGTCGGGATCGTCTTCTCTGTGGTTCAGTGGATTCTGGTCTCCCGCGTCAAGCTTTCTCCAGAGCGGCACTCGCTCTCTAACTCCAGCAAGAATGGCACCGCTGAGTACCTGATTGAGGAAGAAGAAGGCCTCAATGATCACAGCGTCGTTCAGAAATGCGCTGAGATACAGAATGCTATCTCTGAAGGAGCAACCTCTTTCCTCTATACCGAATATCAGTATGTTGGAATTTTCATGGTTGCTTTTGCAATCTTGATTTTCGTTTTCCTTGGCTCTGTGGAGGGTTTCAGCACAAAGAGCCAGCCTTGCTTATACAACAAAGGAGAGATGTGTAAGCCAGCACTTGCCAATGCTATCTTCAGCACAATATCCTTCTTGCTCGGTGGTTTAACTTCTCTGCTTTCTGGTTTCCTTGGGATGAAAATTGCTACTTATGCAAATGCCAGAACCACTCTGGAGGCAAGGAAGGGTGTTGGGAAGGCTTTTATCACTGCATTTAGATCTGGTGCAGTCATGGGATTCCTTCTTGCTGCAAATGGTCTTTTGGTCCTCTATATTGCCATCAACCTCTTCGAGATATACTATGGTGATGACTGGGAAGGCCTTTATGAGGCTATAACTGGTTATGGCCTTGGTGGTTCTTCCATGGCTCTCTTTGGCAGAGTAGGTGGAGGTATCTATACAAAAGCTGCTGATGTTGGTGCAGATCTTGTGGGCAAGGTTGAGAGGGGAATTCCTGAGGATGACCCGAGAAATCCAGCTGTTATAGCTGACAATGTTGGTGATAATGTTGGGGATATTGCTGGGATGGGAGCTGACCTTTTTGGTTCGTATGCTGAGTCATCATGTGCTGCCCTTGTGGTTGCTTCCATCTCCTCATTTGGGATCAATCATGAAATGACTGCAATGTTCTATCCTCTCATCATTAGTTCCATAGGCATTCTTGTTTGTTTGATCACCACCTTATTTGCAACTGACTTTTTTGAGATCAAAGCTGTAAAGGAAATTGAGCCAGCACTGAAGAAGCAGCTCATCATCTCCACTATTTTGATGACTGCTGGAATTGCATTTGTTAGTTGGATTGCTCTTCCATCTTCCTTCACCATCTTCAATTTTGGAAGCCAAAAGGTTGTGAAGAACTGGCAGCTGTTCTTGTGCGTTGGAGTTGGCCTCTGGGCTGGGCTTATTATTGGATTTGTAACAGAGTATTATACTAGCAACACATACAGCCCTGTGCAGGATGTCGCTGATTCCTGCCGGACTGGAGCTGCTACAAATGTTATTTTTGGCCTTGCATTAGGATACAAATCTGTCATTATACCTATTTTTGCCATTGCAGTGAGCATTTTTGTCAGTTTCAGCTTTGCTGCTATGTATGGTATTGCAGTAGCTGCCCTTGGGATGCTGAGCACAATTGCTACCGGATTGGCCATTGATGCTTATGGTCCCATCAGTGACAATGCTGGAGGCATTGCTGAAATGGCTGGCATGAGCCACAGAATCCGTGAGAGAACTGATGCCCTTGATGCTGCAGGAAACACCACTGCTGCTATTGGAAAGGGTTTTGCAATTGGGTCTGCAGCTCTAGTGTCCCTGGCCCTCTTTGGTGCCTTTGTGAGCCGTGCAGCTATTTCAACAGTTGATGTCCTGACTCCAAAAGTTTTCATTGGTTTGCTTGTGGGTGCAATGCTTCCTTACTGGTTCTCTGCAATGACAATGAAGAGTGTTGGAAGTGCAGCTCTAAAGATGGTTGAGGAAGTGCGCCGACAATTCAATACCATCCCAGGTCTCATGGAAGGCACTGCCAAGCCTGATTATGCCACCTGTGTTAAGATCTCTACTGACGCTTCAATCAAAGAGATGATACCACCTGGTGCCCTTGTCATGCTCACTCCCCTCATAGTTGGGACCTTGTTGGGTGTAGAAACTCTAGCTGGTGTTCTTGCCGGATCTCTTGTCTCTGGTGTCCAGATTGCCATCTCTGCTTCCAACACTGGTGGTGCTTGGGATAATGCCAAGAAGTATATTGAGGCTGGGGCTTCAGAGCATGCAAAGGCCCTCGGTCCAAAAGGATCGGACCCACACAAGGCAGCTGTGATTGGTGACACAATTGGGGACCCTCTCAAGGACACTTCTGGCCCGTCTCTCAACATCCTCATCAAGCTAATGGCAGTTGAATCTCTTGTCTTTGCTCCCTTTTTTGCTGCACATGGTGGCCTGCTTTTCAAGATTTGGAAGTAG 2295 46.93 MAILSDLGTEILVPACAIVGIVFSVVQWILVSRVKLSPERHSLSNSSKNGTAEYLIEEEEGLNDHSVVQKCAEIQNAISEGATSFLYTEYQYVGIFMVAFAILIFVFLGSVEGFSTKSQPCLYNKGEMCKPALANAIFSTISFLLGGLTSLLSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFEIYYGDDWEGLYEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERGIPEDDPRNPAVIADNVGDNVGDIAGMGADLFGSYAESSCAALVVASISSFGINHEMTAMFYPLIISSIGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTILMTAGIAFVSWIALPSSFTIFNFGSQKVVKNWQLFLCVGVGLWAGLIIGFVTEYYTSNTYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTLLGVETLAGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHAKALGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLLFKIWK* 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6010880 6016818 + Vvi11g556 Vvi11g556 771997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g556 764 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 7 753 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vvi11g556 764 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 9 758 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vvi11g556 764 PIRSF H+-PPtase 10 761 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vvi11g556 764 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 2 762 - -
Vvi11g556 764 Pfam Inorganic H+ pyrophosphatase 41 748 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vvi11g556 764 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 2 762 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi9g623 Vvi11g556 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g556 K23025 - vvi:100232894 1469.14