Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g575 ATGCTCGGCGTCGCCAACGACATCGGCGAGAACGTTGGCCTTCTACCGGGCGTTGTCTGCAACAAGTTCCCTCCTTGGGTTGTTCTTTCGATCGGTGCTTTTGCCTGCTTCCTTGGGTATGGTGTTCTTTGGCTTGCCTTGAGCCGTACTCTTCTGTCCTTACCTTTTTGGTTGTTATGGTTTGCACTTTGTGTTGCCACCAACAGTAGTGCTTGGTTGAGCACATCTGTGCTTGTGACCAACATGAGAAACTTCCCTCTCAGTCGGGGCACAGTAGCAGGCATTCTCAAAGGTTATGGGGGCCTCAGTGCTGCAGTATATACTGAAATTTACACCACAACACTTCACAAATCCTCGTCCGAGCTTTTGATGTTCCTTGCCCTTGGTGTTCCTCTTATATGTTTCACCATGATGTATTTCATCAGGCCTTGTACTCCAGCTTCTGGGGAAGACTCTGCACAGCATGGCCATTTTCTTTTTACTCAGGCTGCCAGTGTTGTGCTCGGCTCATATCTTCTCACAACTACAATATTGAATGATATATTTTCTTTAAGTGCTCCAATTTCCTATACTTTTCTTGCTGCAATGGTTCTCCTTCTCATGGCTCCACTAGCAATTCCTATAAAGATGACCTTGAACCCCACAAATCGCAGCAAATCAGGGATGCTCAACCAACCAGAAAATGCAGACAAAACAGAACCATTGCTGACACCATCTTCGTCAACAGCAAGCCTTGGAAGTTTTCACAAGAATGACTGTGTGTCAGAGATAGATATGCTCCTTGCTGAGGGAGAGGGGGCAGTGAAGAAAAAGAGAAGACCCCGAAGAGGGGAAGACTTCAAGTTCACTGAAGCTTTAGTCAAGGTTGATTTCTGGCTTCTGTTCTTAGTCTACTTTGCTGGTGTGGGTTCTGGGGTAACTGTTCTCAATAACCTGGCCCAGATAGGGATTGCACAAGGTGTGCATAACACCACAATGTTGTTATGTCTCTTCAGCTTTTGTAATTTCTTGGGCCGTCTTGGTGGAGGTGCTGTTTCTGAACATTTTCTCAGGTCAAAAACAATCCCTCGGACAATTTGGATGACATGCACTCAAGTAATTATGGTCATTACATACCTGCTGTTTGCTTCTGCTCTTGATGGTACCCTCTATGCTGCAACTGCATTACTTGGGATCTGCTATGGTGTTCAATTTTCTATCATGGTCCCGACTGTCTCTGAGCTTTTTGGCTTGAAGCATTTTGGTATTTTTTACAATTTCATGTCGCTGGGGAATCCTCTTGGTGCCTTTCTATTCTCTGGTCTCCTTGCAGGGTTTGTGTATGATAATGAGGCAGCAAAGCAGCAAGGAATGAATCTACTCAATTCAAGTGTCTCTTGCTTGGGTCCAAATTGTTTTAGACTCACCTTCCTGGTTCTGGCTGGTGTCTGTGGTGTGGGCTCCATCCTGAGCATAATTCTGACCATGAGAATCAGACCTGTTTACCAAATGTTATATTCAGGAGGCTCCTTCAGGCTACCTCAAAATTCAGATCATTGA 1539 45.22 MLGVANDIGENVGLLPGVVCNKFPPWVVLSIGAFACFLGYGVLWLALSRTLLSLPFWLLWFALCVATNSSAWLSTSVLVTNMRNFPLSRGTVAGILKGYGGLSAAVYTEIYTTTLHKSSSELLMFLALGVPLICFTMMYFIRPCTPASGEDSAQHGHFLFTQAASVVLGSYLLTTTILNDIFSLSAPISYTFLAAMVLLLMAPLAIPIKMTLNPTNRSKSGMLNQPENADKTEPLLTPSSSTASLGSFHKNDCVSEIDMLLAEGEGAVKKKRRPRRGEDFKFTEALVKVDFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHNTTMLLCLFSFCNFLGRLGGGAVSEHFLRSKTIPRTIWMTCTQVIMVITYLLFASALDGTLYAATALLGICYGVQFSIMVPTVSELFGLKHFGIFYNFMSLGNPLGAFLFSGLLAGFVYDNEAAKQQGMNLLNSSVSCLGPNCFRLTFLVLAGVCGVGSILSIILTMRIRPVYQMLYSGGSFRLPQNSDH* 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6334482 6339364 - Vvi11g575 Vvi11g575 772016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g575 512 Gene3D MFS general substrate transporter like domains 286 495 IPR036259 -
Vvi11g575 512 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 1 512 - -
Vvi11g575 512 SUPERFAMILY MFS general substrate transporter 14 145 IPR036259 -
Vvi11g575 512 SUPERFAMILY MFS general substrate transporter 163 493 IPR036259 -
Vvi11g575 512 Pfam Nodulin-like 1 208 IPR010658 -
Vvi11g575 512 CDD MFS_Mch1p_like 2 480 - -
Vvi11g575 512 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 512 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi9g660 Vvi11g575 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g575 - - vvi:100251745 989.178