Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g641 ATGTTTACGTGGTTGTGGGGCGGGGGGCATGTGTCTTTGATGTCTTCACCACCAAGAATACAAGCCCCAGGAGGAAAGAATCTGCAACTTCATTTCAAAACAAGGATGCCACCTCACTTATTTACTGGTGGCAAGGTTGAGGGGGAGCAAGGAGCTTCTATCCTTGTCGTTTTGCTTGATGTGGACACTAGCAGTGTTGTTCAAACTGGACCAGAATCAGCAGCCAAACTGAATGTTGTGGTGCTGGAAGGTGACTTCAATGAAGAATCTGATGATGATTGGACCAAAGAGCATTTTGAAAGTCATGAAGTGAAGGAGCGTGAGGGGAAAAGACCGCTTCTGACTGGGGATCTACAGGTGACCCTCAAGGAAGGGATAGGAACTCTGGGAGATCTTACTTTTACAGACAATTCAAGTTGGATAAGGAGCAGAAAGTTTCGCCTTGGGGTGAAAATTGCACCCGGATACTGTGAGGATGTTCATATTCGCGAGGCTAAAACAGAGGCTTTTGCAGTTAAAGATCATAGGGGAGAATTATACAAGAAACATTACCCACCTGCATTACATGACGAAGTTTGGAGATTGGATAGAATTGCCAAGGATGGAGCACTGCACAAAAAATTGGTGAAGGCTGCAATTGTGACTGTTGAAGATTTCCTCCGTTTTCTTGTCAGAGATCCACAGAAATTAAGAAATATCCTTGGGAGTGGAATGTCCAATAGGATGTGGGAGAATACAGTGGAGCATGCCAAGACATGTGTATTGGGTGGGAAGGTCTATGTTTACTTCACTGATGAAACTCATAGCACTGGTGCTGTCTTCAACAATATTTATGAGCTTAGGGGTCTCATTGCTGATGAGCAGTTCCTCCCTCTGGAGTCGCTTACCCACAATCAAAAGATTTCAACGGATTCCCTGGTGAAGAGAGCATATGAGAATTGGAGTCAAGTTGTTGAATATGATGGCAAAGTCCTAAATTCCCTAATCGACAGTAAGAAGGTAACAACATCCTCATCTATACCTATAGTTGATCACGGCCATGTCAGGGATCACTATATTAGAACTGCACCACACAGCAAGAACCATATCCCTTCTGACCCAAGCCCACAATGCCAACATGAAAATAACCACCCATCGGCCAGGCAATTGATCGAATACCCATTTGTGAGGTCTGATCCAACAATGGAGATGGCATTGACAACTCCACAAGCAGCATTATCTAGCAGCATGGATTACATGAATGGACAGGGATTAGAAGACTATTTCTCCGAGGAAATCCGGCTGAGGAGTTCGGAGATGTTAGAAAATGATGAGATGCAGAGAATGCTAAAAACATTCAATATGGGTGTTGATACTGGGATGGGACCTGCCTTTGGTCATTCTGATGATGCTTGTTATTCCTACAGAAAGGCTGTTGTGGGATGGCTTAAGTTGAGAGCTGCCTTGAGATGGGGAATATTCATAAGGAAGAAAGCAGCAGAGAGGAGAGCTCAGCTTGTTGAGCTAGACTGA 1512 44.38 MFTWLWGGGHVSLMSSPPRIQAPGGKNLQLHFKTRMPPHLFTGGKVEGEQGASILVVLLDVDTSSVVQTGPESAAKLNVVVLEGDFNEESDDDWTKEHFESHEVKEREGKRPLLTGDLQVTLKEGIGTLGDLTFTDNSSWIRSRKFRLGVKIAPGYCEDVHIREAKTEAFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLVKAAIVTVEDFLRFLVRDPQKLRNILGSGMSNRMWENTVEHAKTCVLGGKVYVYFTDETHSTGAVFNNIYELRGLIADEQFLPLESLTHNQKISTDSLVKRAYENWSQVVEYDGKVLNSLIDSKKVTTSSSIPIVDHGHVRDHYIRTAPHSKNHIPSDPSPQCQHENNHPSARQLIEYPFVRSDPTMEMALTTPQAALSSSMDYMNGQGLEDYFSEEIRLRSSEMLENDEMQRMLKTFNMGVDTGMGPAFGHSDDACYSYRKAVVGWLKLRAALRWGIFIRKKAAERRAQLVELD* 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7401212 7409072 - Vvi11g641 Vvi11g641 772082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g641 503 Pfam Calmodulin binding protein central domain 187 253 IPR046830 -
Vvi11g641 503 PANTHER OS02G0177800 PROTEIN 10 340 IPR012416 GO:0005516
Vvi11g641 503 PANTHER OS02G0177800 PROTEIN 407 502 IPR012416 GO:0005516
Vvi11g641 503 PANTHER OS02G0562300 PROTEIN 407 502 - -
Vvi11g641 503 PANTHER OS02G0562300 PROTEIN 10 340 - -
Vvi11g641 503 Pfam Calmodulin binding protein C-terminal domain 258 320 IPR046829 -
Vvi11g641 503 Pfam Calmodulin binding protein-like N-terminal domain 28 175 IPR046831 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g641 - - vvi:100255894 962.985