Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g642 ATGGAAGGTTCAAGGAGCAGGAGGGTGGATAAAAGGGGCTATGAACAGAGCGTGGAGGATCAAGATGACCTGCCCGGATCAAAAAAGCCCAAGCTGCCCGCTTTAGCGAGTGTAATTGTGGAAGCTTTGAAGGTGGATAGTTTGCAACGACTTTGCTCTTCTTTGGAGCCTCTTTTCCGCAGAATTGTCAGTGAAGAGGTGGAGCGCGCTTTGACAAGATTAGGTCATGCTAAACTTGTTGGAAGATCTTCACCACCAAGAATACAAGCCCCAGGAGGAAAGAATCTGCAACTTCATTTCAAAACAAGGATGCCACCTCACTTATTTACTGGTGGCAAGGTTGAGGGGGAGCAAGGAGCTTCTATCCTTGTTGTTTTGCTTGATGTGGACACTAGCAGTGTTGTTCAAACTGGACCAGAATCAGCAGCCAAACTGAATGTTGTGGTGCTGGAAGGTGACTTTAATGAAGAATCTGATGATGATTGGACCAAAGAGCATTTTGAAAGTCATGAAGTGAAGGAGCGTGAGGGGAAAAGACCGCTTCTGACTGGGGATCTACAAGTGACCCTCAAGGAAGGGATAGGAACTCTGGGAGATCTTACTTTTACAGACAATTCAAGCTGGATAAGGAGCAGAAAGTTTCGCCTTGGGGTGAAAATTGCACCCGGATACTGTGAGGATGTTCATATTCGCGAGGCTAAAACAGAGGCTTTTGCGGTTAAAGATCATAGGGGAGAATTATACAAGAAACATTACCCACCTGCATTACATGACGAAGTTTGGAGATTGGATAGAATTGCCAAGGATGGAGCACTGCACAAAAAATTGGTGAAGGCTGCAATTGTGACTGTTGAAGATTTCCTCCGTTTTCTTGTCAGAGATCCACAGAAATTAAGAAATATCCTTGGGAGTGGAATGTCCAATAGGATGTGGGAGAATACAGTGGAGCATGCCAAGACATGTGTATTGGGTGGGAAGGTCTATGTTTACTTCACTGATGAAACTCATAGCACTGGTGCTGTCTTCAACAATATTTATGAGCTTAGGGGTCTCATTGCTGATGAGCAGTTCCTCCCTCTGGAGTCGCTTACCCACAATCAAAAGATTTCAACGGATTCCCTGGTGAAGAGAGCATATGAGAATTGA 1146 44.94 MEGSRSRRVDKRGYEQSVEDQDDLPGSKKPKLPALASVIVEALKVDSLQRLCSSLEPLFRRIVSEEVERALTRLGHAKLVGRSSPPRIQAPGGKNLQLHFKTRMPPHLFTGGKVEGEQGASILVVLLDVDTSSVVQTGPESAAKLNVVVLEGDFNEESDDDWTKEHFESHEVKEREGKRPLLTGDLQVTLKEGIGTLGDLTFTDNSSWIRSRKFRLGVKIAPGYCEDVHIREAKTEAFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLVKAAIVTVEDFLRFLVRDPQKLRNILGSGMSNRMWENTVEHAKTCVLGGKVYVYFTDETHSTGAVFNNIYELRGLIADEQFLPLESLTHNQKISTDSLVKRAYEN* 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7425204 7437817 - Vvi11g642 Vvi11g642 772083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g642 381 MobiDBLite consensus disorder prediction 1 30 - -
Vvi11g642 381 Pfam Calmodulin binding protein central domain 255 321 IPR046830 -
Vvi11g642 381 Pfam Calmodulin binding protein C-terminal domain 326 381 IPR046829 -
Vvi11g642 381 MobiDBLite consensus disorder prediction 1 27 - -
Vvi11g642 381 PANTHER OS02G0562300 PROTEIN 5 381 - -
Vvi11g642 381 Pfam Calmodulin binding protein-like N-terminal domain 96 243 IPR046831 -
Vvi11g642 381 PANTHER OS02G0177800 PROTEIN 5 381 IPR012416 GO:0005516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g642 - - vvi:100255894 758.444