Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g65 ATGACAGAGTCTAGAGGCGCTTACCGCACTAGACATTCTCGATTTCGTGGAGCTTTTAATGGAATTTGTGCTTTGGTTATGTTTCTGTTCTTGTTCTTTAACCGGAGCGATTTTATGGCAAAATCGTTCGTGGTGAATTCGCCTTCGGTTCTCCATCCTCAGTGGAGATTGAGAGGCGGTTTCTACAGTAATGGGGTTGAGGTGATTCGCCGGAGAACTGCCCAAGAAAATGTTAGTTCGTCGGATTTTGATACCACTCTCGGTGATGATGACGACGAAGAAGACGGGTCAATCAGCTTTTTGGGGTATTTGTTATTGGGAATTTGGCTCGTGACTCTGTTCTATATGCTGGGCAACACTGCAGCAGACTACTTCTGTTGCTCTTTAGAGAAGCTTTCAAGTCTCCTGAAGCTTCCGCCCACTGTTGCAGGGGTTACTCTCCTCCCACTGGGGAATGGGGCCCCCGATGTGTTTGCCAGCATTGCTGCTTTCATGGGGAAAAATTCAGGTGAAGTGGGGCTCAACAGTGTGTTGGGTGGAGCGGTCTTTGTTACCTGCATTGTTGTGGGGGCTGTTTCTCTTGGGGTTGCAGACAAGAGGGTTCAGATAGATAAGAAATGCTTTGTCAGAGATATGTGCTTTTTTCTATTCACTCTCTTGTCCCTTGGTATTGTTTTGCTTGTTGGTGAGGTGAGTGTTGGAGGGGCAATTGCCTTTGTTTCAATCTATATTGTATATGTTTTCTTTGTTGCTGCAAATGAGATTTTGAGGAAACATGCCAGGAGCTTGAGGTTGGATGCTGTAACCCCATTGCTTCCGGTCACAGCATTTATTTTCTCCCATGGAAATGATGAGAATGATTCAGTTTACACCTCATTGCTCGAGTCTGACTCTGAAAATGATGTGCCGCATCTCCAAACCAAGCTGCCCCAGTGGATGTGGGCTTCCCATATGGCAATTTACTCGAACCAATCTCTGAAGTCTGGTGTAGAAGAGAATTCAAAGCCTGTCTGGGGTTGGAACGATGGGGACACGATGAACAACAACCCATACTTCTCTTGCTCTAGATTATGCTCATTTCTAGAGATGCCATTGATCCTGCCACGGCGACTGACAATCCCTATAGTTGAAGAGGAGCGGTGGTCGAAGGGGTATGCTGTGGCCAGTGTCACATTGGCCCCCATTCTTCTTGCATTTCTATGGAACACCCAAGATAGCCCATCTGTTTTGAGTGGAGGAATCACATATCTTATTGCTCTGCTGGTGGCATTGGGTGTGATATTTGGAATCAACCCATCAATCCTCGCGATAACTGTACTGGCATGGGGTAACTCAATGGGTGATTTAATGTCCAATGTTGCTTTGGCAATGAATGGGGGAGATGGAGTGCAGATTGCCATGTCAGGATGCTATGCTGGTCCTATGTTCAACACACTTGCTGGCTTGGGGATCTCAATGCTGCTTGGAGCCTGGTCTAGCAGGCCTGCCTCATACATAATTCCTCGAGATGGCACCTTGTTCTGCACAATGGGGTTTCTTGTATCAGGGCTTATCTGGTCACTCATTGTGTTGCCGCGAAGCGATATGCGACCTACCAAAACATTAGGATTTGGCTTAGTTACCATCTATTTGATATTCCTCCTAGTCAGGGTATTCACCTCTATGGGTGTCATGTCATTTGATGGTATTAGTTGA 1695 46.43 MTESRGAYRTRHSRFRGAFNGICALVMFLFLFFNRSDFMAKSFVVNSPSVLHPQWRLRGGFYSNGVEVIRRRTAQENVSSSDFDTTLGDDDDEEDGSISFLGYLLLGIWLVTLFYMLGNTAADYFCCSLEKLSSLLKLPPTVAGVTLLPLGNGAPDVFASIAAFMGKNSGEVGLNSVLGGAVFVTCIVVGAVSLGVADKRVQIDKKCFVRDMCFFLFTLLSLGIVLLVGEVSVGGAIAFVSIYIVYVFFVAANEILRKHARSLRLDAVTPLLPVTAFIFSHGNDENDSVYTSLLESDSENDVPHLQTKLPQWMWASHMAIYSNQSLKSGVEENSKPVWGWNDGDTMNNNPYFSCSRLCSFLEMPLILPRRLTIPIVEEERWSKGYAVASVTLAPILLAFLWNTQDSPSVLSGGITYLIALLVALGVIFGINPSILAITVLAWGNSMGDLMSNVALAMNGGDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWSSRPASYIIPRDGTLFCTMGFLVSGLIWSLIVLPRSDMRPTKTLGFGLVTIYLIFLLVRVFTSMGVMSFDGIS* 565
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 799691 801692 + Vvi11g65 Vvi11g65 771506
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g65 564 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 97 419 - -
Vvi11g65 564 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 1 83 - -
Vvi11g65 564 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 417 562 - -
Vvi11g65 564 Gene3D - 358 552 IPR044880 -
Vvi11g65 564 Gene3D - 138 283 IPR044880 -
Vvi11g65 564 Pfam Sodium/calcium exchanger protein 410 551 IPR004837 GO:0016021|GO:0055085
Vvi11g65 564 Pfam Sodium/calcium exchanger protein 108 250 IPR004837 GO:0016021|GO:0055085
Vvi11g65 564 PANTHER CATION/CALCIUM EXCHANGER 3-LIKE 1 83 - -
Vvi11g65 564 PANTHER CATION/CALCIUM EXCHANGER 3-LIKE 417 562 - -
Vvi11g65 564 PANTHER CATION/CALCIUM EXCHANGER 3-LIKE 97 419 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Vvi9g78 Vvi11g65 ECH
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g65 K13754 - vvi:100249061 1010.75