Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g691 ATGCAGGCTGATCAGACGGTGTTGAGCTTGAGACCTGGTGGTGGCGGCGGCGGCGGCGGCGGAGCCAATCGAGGAAGCAGATTCCTTGGTCCTCGGTTCGATTCGTCTTCTTCTTCGCCTTTTGGTTCATCTTCTGATCTTCCTGTTCTGCGTCCTCATGGCGGTGCTCCTTCCTCTTTCTCTATAAAGGCTGGGGATAGTCGGTTTGAGGGTCGTGAGCGTGTGCGGTTCACCCGAGACAAACTGTTGCAACTTAGGGAGGTTGTTGATGTCCCTGAGGATATATTGAAAATCAAACAAGAGATAGAAGCTGAATTATTTGGTGAAGATCAAAATTGGGGTCGGGGAGAAAGCAATCTGCCAAATCAATCTCAGAGTCGTTATTCTGAGCCAGATAATCGTGACTGGCGTGGCCGGTCTGCACAGCTTCCTGCCTCTGGAGAGGAGAGGTCATGGTTTGACTCTAGACAGCAGGAAGCAAACCAATTTAATCGTCAAGACCAACTAAACTCCCAGTTTGCAAAGGCTCAAATATCTTCTGTCCTAGGGGGACCTGCTCCTGCTCTAGTGAAGGCTGAGGTGCCATGGTCCGCTCGACGTGTGAATCTTTCTGAGAAGGAACGTGTCTTGAAGACAGTGAAAGGGATACTGAACAAGCTCACTCCAGAGAAGTTTGATCTTCTCAAGGGCCAATTGATTGACTCTGGGATCACAACAGCTGATATCTTGAAGGGAGTCATCTCGCTGATATTTGATAAGGCAGTGCTAGAACCCACTTTTTGTCCCATGTATGCCCTCCTGTGCTCTGATCTTAATGAAAAGCTTCCCCCATTCCCATCTGATGAACCTGGTGGAAAAGAAATCACTTTTAAGCGAGTTCTCTTGAATAACTGCCAGGAGGCATTTGAAGGTTCTGATAAACTGAGAGCAGAAATAAGGCAGATGACTGCCCCTGAACAAGAGTTGGAGCGAAGAGACAAGGAAAGAATGGTTAAGCTTCGAACTTTGGGAAACATCCGTCTTATTGGGGAGCTTCTGAAACAGAAAATGGTACCTGAAAAGATTGTCCACCACATTGTTCAGGAGCTTTTAGGACATGATAATAAATCTTGTCCTGATGAAGAGAATGTTGAGGCCATATGCCAGTTCTTTAACACTATAGGTAAGCAGCTTGATGAAAGTACAAAATCTAGGCGCATAAATGATATGTACTTTAGCCGATTGAAGGAATTAACGACAAACCCCCAATTGGCTCCACGTCTGAGGTTCATGGTTCGTGATGTTCTTGATCTGCGTGCAAACAGTTGGGTTCCCAGGCGGGAAGAGGTGAAAGCTAAAACCATAACAGAAATCCATACAGAGGCAGAAAAAAATCTTGGGTTGCGTCCAGGTGCCACTGCAAGCATTAGAAATAGTCGCAACATTACCCATGTCCAGTCGCCATTGATGGGCAAGTCAATGCCACTGAACTCAAGACTGTTACCTCAGGGCAGTGCTGGTTTTATAAGTGGTAGGACAAGTGCCCTATTGCAGGGTAGTGGTCCCCCTCCTGCCCGCACTGCCAACTTTGGCTTGGCAGCTGAGAAACCAGTGACTCCTGCTGCCAGATTGAATTCAGATGACCTCCGGAGAAAAACAGTCTCACTTCTTGAGGAGTACTTTGGTGTTCGGATTTTAGATGAAGCACTACAGTGCGTGGAGGAACTAAAGTCCCCAGCTTACCATCCCGAAGTTGTGAAGGAGGCTATTTCCCTTGCACTAGAAAAGAGCCCACCTTGTGTTGACCCTGTTGCGAAACTCCTGGAGTTCTTGTTTTCCAAGAAGGTTCTTACCACTATGGATATAGGGACTGGATGTTTGATTGACGGAAATCATGAAGAAAGTGGAGGATGA 1893 47.07 MQADQTVLSLRPGGGGGGGGGANRGSRFLGPRFDSSSSSPFGSSSDLPVLRPHGGAPSSFSIKAGDSRFEGRERVRFTRDKLLQLREVVDVPEDILKIKQEIEAELFGEDQNWGRGESNLPNQSQSRYSEPDNRDWRGRSAQLPASGEERSWFDSRQQEANQFNRQDQLNSQFAKAQISSVLGGPAPALVKAEVPWSARRVNLSEKERVLKTVKGILNKLTPEKFDLLKGQLIDSGITTADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKEITFKRVLLNNCQEAFEGSDKLRAEIRQMTAPEQELERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGHDNKSCPDEENVEAICQFFNTIGKQLDESTKSRRINDMYFSRLKELTTNPQLAPRLRFMVRDVLDLRANSWVPRREEVKAKTITEIHTEAEKNLGLRPGATASIRNSRNITHVQSPLMGKSMPLNSRLLPQGSAGFISGRTSALLQGSGPPPARTANFGLAAEKPVTPAARLNSDDLRRKTVSLLEEYFGVRILDEALQCVEELKSPAYHPEVVKEAISLALEKSPPCVDPVAKLLEFLFSKKVLTTMDIGTGCLIDGNHEESGG* 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8303023 8313124 - Vvi11g691 Vvi11g691 772132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g691 630 MobiDBLite consensus disorder prediction 30 45 - -
Vvi11g691 630 ProSiteProfiles MI domain profile. 541 630 IPR003891 -
Vvi11g691 630 MobiDBLite consensus disorder prediction 110 152 - -
Vvi11g691 630 Pfam MIF4G domain 210 434 IPR003890 GO:0003723|GO:0005515
Vvi11g691 630 SMART ma3_7 542 630 IPR003891 -
Vvi11g691 630 Pfam MA3 domain 542 619 IPR003891 -
Vvi11g691 630 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 527 624 - -
Vvi11g691 630 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 1 476 - -
Vvi11g691 630 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 476 523 - -
Vvi11g691 630 SUPERFAMILY ARM repeat 536 620 IPR016024 -
Vvi11g691 630 MobiDBLite consensus disorder prediction 115 129 - -
Vvi11g691 630 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 527 624 IPR045208 GO:0003743
Vvi11g691 630 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 1 476 IPR045208 GO:0003743
Vvi11g691 630 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 476 523 IPR045208 GO:0003743
Vvi11g691 630 MobiDBLite consensus disorder prediction 1 64 - -
Vvi11g691 630 SMART if4_15 210 435 IPR003890 GO:0003723|GO:0005515
Vvi11g691 630 SUPERFAMILY ARM repeat 202 438 IPR016024 -
Vvi11g691 630 Gene3D - 201 436 - -
Vvi11g691 630 Gene3D - 536 620 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g691 K03260 - vvi:100260481 923.309