Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g692 ATGGCTGCTTCCAAGGCTGAGGGGAAGGCGATTGGCATCGACTTGGGCACCACCTACAGCTGCGTGGGTGTATGGCTACACGACCGAGTCGAGATCATCCCCAACGATCAAGGTAACAGGACTACTCCCTCTTACGTTGCTTTCACCGATACAGAGCGTTTGATCGGGGATGCGGCGAAGAATCAAGTGGCTTTGAATCCTAATAACACACTCTGGCCTGTGAACAACGCCGTGGTTACGGTGCCGGCCTACTTCAACGATTCTCAGAGGCAGGCAACCAAGGACGCTGGAGCTATTGCGGGGCTGAACGTGATGAGAATCATCAACGAGCCTACTGCTGCAGCAATTGCTTATGGGTTGGACAAGAAGGCGTCGCGAAAGGGTGAGCAGAATGTGAAGGCCACAGCTGGAGATACCCATCTGGGTGGTGAGGATTTTGATAACAGACTCGTGAATCACTTCGTTTCGGAGACTGCTTGCGAAAGGGCCAAGAGGACTCTGTCTTCCACCACGCAGACCACAATCGAAATTGATTCTCTGAAGTGTATGGAGCCGGTGGAGAAGTGCCTCCGCGACGCTAAGATCGACAAGGGCCAAGTCCATGAGGTGGTCCTCGTCGGTGGCGGTGAAGGCAACGAGAAAGTACAAGATCTGCTACTTCTAGATGTCACGCCTCTCAGTCTCGGCCTCGAAACCGCTGGCGGAGTCATGACCGTGTTGATTCCTCGCAACACCACCATTCCCACGAAGAAAGAATCACCATCACCAACGACAAGGGAAGACTGA 786 53.56 MAASKAEGKAIGIDLGTTYSCVGVWLHDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPNNTLWPVNNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRKGEQNVKATAGDTHLGGEDFDNRLVNHFVSETACERAKRTLSSTTQTTIEIDSLKCMEPVEKCLRDAKIDKGQVHEVVLVGGGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKESPSPTTRED* 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8348103 8349655 - Vvi11g692 Vvi11g692 772133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g692 261 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 217 261 IPR029047 -
Vvi11g692 261 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Vvi11g692 261 SUPERFAMILY Actin-like ATPase domain 9 122 IPR043129 -
Vvi11g692 261 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 131 180 - -
Vvi11g692 261 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 209 253 - -
Vvi11g692 261 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 74 132 - -
Vvi11g692 261 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 5 72 - -
Vvi11g692 261 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 181 209 - -
Vvi11g692 261 Gene3D Actin; Chain A, domain 4 142 157 - -
Vvi11g692 261 Gene3D - 161 216 - -
Vvi11g692 261 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 213 258 IPR029047 -
Vvi11g692 261 SUPERFAMILY Actin-like ATPase domain 127 219 IPR043129 -
Vvi11g692 261 PANTHER HEAT SHOCK PROTEIN 70KDA 5 72 IPR013126 GO:0005524|GO:0140662
Vvi11g692 261 PANTHER HEAT SHOCK PROTEIN 70KDA 131 180 IPR013126 GO:0005524|GO:0140662
Vvi11g692 261 PANTHER HEAT SHOCK PROTEIN 70KDA 74 132 IPR013126 GO:0005524|GO:0140662
Vvi11g692 261 PANTHER HEAT SHOCK PROTEIN 70KDA 181 209 IPR013126 GO:0005524|GO:0140662
Vvi11g692 261 PANTHER HEAT SHOCK PROTEIN 70KDA 209 253 IPR013126 GO:0005524|GO:0140662
Vvi11g692 261 Gene3D - 74 122 - -
Vvi11g692 261 PRINTS 70kDa heat shock protein signature 9 22 - -
Vvi11g692 261 PRINTS 70kDa heat shock protein signature 37 49 - -
Vvi11g692 261 PRINTS 70kDa heat shock protein signature 59 67 - -
Vvi11g692 261 Gene3D - 2 73 - -
Vvi11g692 261 Gene3D - 129 141 - -
Vvi11g692 261 Pfam Hsp70 protein 73 124 IPR013126 GO:0005524|GO:0140662
Vvi11g692 261 Pfam Hsp70 protein 10 72 IPR013126 GO:0005524|GO:0140662
Vvi11g692 261 Pfam Hsp70 protein 211 257 IPR013126 GO:0005524|GO:0140662
Vvi11g692 261 Pfam Hsp70 protein 127 157 IPR013126 GO:0005524|GO:0140662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g692 K03283 - vvi:100265708 353.599