Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g71 ATGACCCCATTTACAATTAGTCACTTTAAAGCTGGTTCTCGAGCTTTTAAGCCATTAAAGATCAGAAGAAACCTGCTGTCGATTCACATTCTTTCTTTTTGTTACGTTCGCTTTGGGTCTGTGGCCATGGCGTCTGTGGTGTGGCTGTTCTCGTTCTGGTTTGCATGCTTTTCACTGTCGGTGATGGCGAAGCGGACTTACATAGTGCAAATGAATCACCGGCAGAAGCCTTTGTCATATGCAACCCACGATGACTGGTACTCGGCGAGTCTTCAGTCTATATCCTCCAACTCTGATGATTTGCTTTATACGTATTCTACGGCGTACCATGGTTTTGCTGCGTCTCTGGATCCTGAGCAGGCTGAGGCGCTGCGGAAATCGGATTCGGTTATGGGCGTTTACGAGGACGAGGTTTATAGTCTTCATACGACACGGTCACCGGAGTTTCTGGGGCTGGATACTGAATTGGGGTTGTGGGCTGGGCATCGGACGCAGGACCTGAACCAGGCGTCCCAGGATGTCATCATTGGAGTTCTCGACACTGGAGTGTGGCCGGATTCCAGGAGCTTTGATGATTCCGGCATGACGGAGGTTCCAGCAAGGTGGCGCGGCAAATGCGAGGAGGGTCCCGATTTTCAGGCTTCGTCCTGTAACAAGAAACTTATTGGGGCTCAGAGCTTCTCCAAGGGCTACCGCATGGCCTCCGGCGGGAATTTCTCGCCGCGAGACGTCGACGGCCACGGCACCCACACGGCGAGCACCGCAGCCGGCGCACACGTGTCGAACGCAAGCCTCCTTGGGTACGCCAGCGGAACAGCTCGCGGGATGGCCACACACGCGCGTGTTGCAGCCTATAAGGTGTGTTGGAGCACCGGCTGCTTTGGTTCTGACATTCTTGCCGGAATGGATCGAGCCATAGTTGACGGCGTCGATGTGCTCTCACTCTCTCTTGGCGGCGGCTCCGGGCCTTACTACCGTGACACCATCGCCATCGGAGCTTTCACAGCGATGGAAATGGGCATTTTCGTGTCTTGCTCAGCTGGAAACAGTGGCCCAAGCAAAGCCTCATTGGCTAACGTCGCTCCATGGATAATGACCGTTGGAGCTGGAACCCTGGACAGGGATTTTCCGGCTTACGCACTGCTAGGTAATGGGAAGAAAATCACCGGCGTATCTCTCTACAGCGGTCGAGGCATGGGTAAAAAACCGGTTTCGTTGGTTTACAGCAAAGGAAACAGCACCAGCAACTTGTGTCTGCCCGGTTCGCTTCAACCGGCGTACGTACGAGGGAAAGTGGTGATCTGTGACAGAGGAATCAACGCTCGTGTTGAGAAAGGCTTGGTGGTGCGCGATGCCGGAGGCGTGGGAATGATACTCGCTAACACTGCCGTGAGCGGCGAGGAGTTGGTGGCAGACAGCCACTTGCTTCCGGCAGTGGCCGTGGGGAGGAAGGTGGGTGATGTGCTCAGAGCCTACGTGAAGTCAGTGGCGAATCCGACGGCTCTGCTGAGTTTTGGTGGGACTGTGTTGAACGTCCGGCCGTCACCGGTGGTGGCGGCGTTCAGTTCGAGAGGGCCCAATCTGGTGACTCCCCAGATCCTGAAGCCCGATCTGATTGGACCGGGTGTTAATATCCTAGCAGCTTGGTCTGAGGCTCTTGGGCCCACTGGGCTGGAGAAGGACACGAGGAAAACTCAGTTCAATATCATGTCAGGTACATCGATGTCTTGCCCACACATAAGTGGGGTGGCCGCGCTGATCAAAGCGGCACATCCAGAATGGAGTCCAAGCGCCGTCAAATCGGCTCTCATGACTACTGCCTACACTCGTGACAACACCAAATCTCCTCTGCGTGATGCTGCGGATGGTGGGTTATCCACACCATTGGCGCATGGGTCCGGCCATGTTGATCCACAGAAGGCTTTATCTCCGGGCTTGGTGTATGATATCTCAACGCAAGACTACGTCGCATTCCTTTGCTCATTGGACTACACCATCGAACATCTGCAGATTCCGTCTATCAAGTGGCCGAGTGCATTTGGCTCGATTGTCTGGAGCAACACCCAGCACCAAGTTAAGAGCCCAGTTGCCTATGCCTGGACACAGTTGTAA 2112 54.69 MTPFTISHFKAGSRAFKPLKIRRNLLSIHILSFCYVRFGSVAMASVVWLFSFWFACFSLSVMAKRTYIVQMNHRQKPLSYATHDDWYSASLQSISSNSDDLLYTYSTAYHGFAASLDPEQAEALRKSDSVMGVYEDEVYSLHTTRSPEFLGLDTELGLWAGHRTQDLNQASQDVIIGVLDTGVWPDSRSFDDSGMTEVPARWRGKCEEGPDFQASSCNKKLIGAQSFSKGYRMASGGNFSPRDVDGHGTHTASTAAGAHVSNASLLGYASGTARGMATHARVAAYKVCWSTGCFGSDILAGMDRAIVDGVDVLSLSLGGGSGPYYRDTIAIGAFTAMEMGIFVSCSAGNSGPSKASLANVAPWIMTVGAGTLDRDFPAYALLGNGKKITGVSLYSGRGMGKKPVSLVYSKGNSTSNLCLPGSLQPAYVRGKVVICDRGINARVEKGLVVRDAGGVGMILANTAVSGEELVADSHLLPAVAVGRKVGDVLRAYVKSVANPTALLSFGGTVLNVRPSPVVAAFSSRGPNLVTPQILKPDLIGPGVNILAAWSEALGPTGLEKDTRKTQFNIMSGTSMSCPHISGVAALIKAAHPEWSPSAVKSALMTTAYTRDNTKSPLRDAADGGLSTPLAHGSGHVDPQKALSPGLVYDISTQDYVAFLCSLDYTIEHLQIPSIKWPSAFGSIVWSNTQHQVKSPVAYAWTQL* 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 814148 817606 - Vvi11g71 Vvi11g71 771512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g71 703 CDD PA_subtilisin_like 382 501 - -
Vvi11g71 703 PRINTS Subtilisin serine protease family (S8) signature 171 190 IPR015500 -
Vvi11g71 703 PRINTS Subtilisin serine protease family (S8) signature 243 256 IPR015500 -
Vvi11g71 703 PRINTS Subtilisin serine protease family (S8) signature 571 587 IPR015500 -
Vvi11g71 703 ProSitePatterns Serine proteases, subtilase family, serine active site. 572 582 IPR023828 -
Vvi11g71 703 Gene3D - 373 510 - -
Vvi11g71 703 SUPERFAMILY PA domain 423 496 IPR046450 -
Vvi11g71 703 Pfam Subtilase family 172 611 IPR000209 GO:0006508|GO:0008236
Vvi11g71 703 Pfam PA domain 406 488 IPR003137 -
Vvi11g71 703 Gene3D Peptidase S8/S53 domain 173 655 IPR036852 GO:0004252|GO:0006508
Vvi11g71 703 ProSiteProfiles Serine proteases, subtilase domain profile. 155 642 - -
Vvi11g71 703 SUPERFAMILY Protease propeptides/inhibitors 66 140 - -
Vvi11g71 703 CDD Peptidases_S8_3 139 608 IPR034197 -
Vvi11g71 703 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 55 671 IPR045051 -
Vvi11g71 703 PANTHER - 55 671 - -
Vvi11g71 703 Pfam Peptidase inhibitor I9 66 142 IPR010259 -
Vvi11g71 703 SUPERFAMILY Subtilisin-like 141 646 IPR036852 GO:0004252|GO:0006508
Vvi11g71 703 MobiDBLite consensus disorder prediction 613 636 - -
Vvi11g71 703 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 58 142 IPR037045 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi9g78 Vvi11g71 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g71 - - vvi:100264662 1217.99