Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g735 | ATGTTGCTCTTCCTCTTCCTCTTCCTTCTCTTTCTCTCCTCTGCCTCACCCTCTCTCTCCTACGAACCTCGCAACCATGAAGTCGAGGCTTTGATAAGTATCAGACTAGCTTTGAATGACCCCCATGGGGTTCTCAGCAACTGGGATGAAGACTCTGTAGACCCATGTAGCTGGGCCATGATCACATGCTCCACTGAAAATCTTGTCACTGGCTTAGGAGCTCCAAGCCAATCTCTGTCTGGAAGTTTGTCCGGGATGATTGGGAACCTCACCAATCTTAAACAAGTGTTATTGCAGAACAACAATATCTCCGGCCCGATTCCAACGGAGCTCGGTACTCTTCCGAGACTTCAAACGTTGGATCTCTCCAATAACCGCTTCGCAGGAGCTGTCCCAGCGTCTCTGGGTCAGTTGAGTAATCTTCATTACCTGAGGCTGAACAACAACAGCTTGTCTGGAGCATTTCCTGTGTCTTTAGCCAAAATCCCACAACTTGCTTTCTTGGACTTGTCTTATAACAATCTCAGTGGACCTGTGCCTAAATTTCCAGCCAGAACATTCAATGTTGTGGGAAACCCCTTGATTTGTGAGGCCAGCTCCACGGATGGTTGCTCTGGATCAGCCAATGCGGTCCCTCTTTCCATCTCTCTTAATTCATCAACTGGAAAACCGAAGTCCAAGAAAGTAGCAATTGCACTTGGGGTCAGCCTCAGTATTGTCTCTCTCATCCTCTTAGCACTTGGATATCTTATTTGCCAGAGAAGAAAACAAAGAAACCAGACCATCTTAAACATCAATGATCATCAAGAAGAGGGTCTAATAAGCCTGGGCAACCTAAGAAACTTCACTCTAAGAGAACTCCAACTTGCCACAGACAATTTCAGCACCAAGAACATACTTGGTAGCGGAGGTTTTGGTAATGTATATAAGGGTAAGCTAGGAGATGGGACTATGGTGGCAGTGAAACGGCTTAAAGATGTGACGGGAACTGCTGGAGAATCACAGTTCAGGACTGAATTGGAGATGATTAGCTTGGCAGTTCACCGGAATTTGCTTCGGCTGATTGGCTACTGTGCCACCCCAAATGAGAGGCTTTTGATTTACCCCTACATGTCTAATGGCAGTGTGGCCTCCAGGCTTAGAGGAAAACCAGCATTAGACTGGAACACAAGGAAGAGGATAGCAATTGGCGCTGCACGGGGTCTTCTATATCTACATGAGCAGTGCGATCCAAAGATAATCCACAGAGATGTGAAGGCTGCTAATGTGCTCCTGGATGACTATTGTGAGGCTATTGTTGGTGACTTTGGCCTTGCAAAGCTCCTTGACCATTCTGATTCCCATGTTACCACTGCTGTCCGTGGAACTGTTGGGCACATTGCACCTGAGTACCTCTCCACTGGCCAATCATCTGAGAAAACTGATGTCTTTGGGTTTGGTATTCTCTTGTTGGAGCTCATAACTGGAATGAGAGCTCTTGAGTTTGGCAAAACGGTTAATCAGAAAGGAGCCATGCTTGAATGGGTGAAGAAAATACAGCAGGAGAAGAAAGTGGAAGTGCTGGTGGACAGAGAGCTAGGCTGCAACTACGACAGGATCGACGTGGGGGAGATGCTACAAGTGGCTTTGCTGTGCACTCAATATCTGCCTGCCCACCGCCCCAAAATGTCGGAAGTGGTCAGGATGCTGGAAGGCGATGGCCTAGCAGAGAAATGGGCAGCCTCCCACAACCACAACAACAATAATCCCACCCCCAACATCTCCCATTTCAACAGCCACAAAAGTACATGGCGCCCTACCACTGCATCAAAGCATGATAACATTGATCATGATGGTTCAAGCATGTTCGGCACCATGATGGACGAGGAGGACGATGATCATTCCTTGGATGCCCATGCCATGGAACTTTCTGGTCCAAGATAG | 1923 | 47.63 | MLLFLFLFLLFLSSASPSLSYEPRNHEVEALISIRLALNDPHGVLSNWDEDSVDPCSWAMITCSTENLVTGLGAPSQSLSGSLSGMIGNLTNLKQVLLQNNNISGPIPTELGTLPRLQTLDLSNNRFAGAVPASLGQLSNLHYLRLNNNSLSGAFPVSLAKIPQLAFLDLSYNNLSGPVPKFPARTFNVVGNPLICEASSTDGCSGSANAVPLSISLNSSTGKPKSKKVAIALGVSLSIVSLILLALGYLICQRRKQRNQTILNINDHQEEGLISLGNLRNFTLRELQLATDNFSTKNILGSGGFGNVYKGKLGDGTMVAVKRLKDVTGTAGESQFRTELEMISLAVHRNLLRLIGYCATPNERLLIYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKTVNQKGAMLEWVKKIQQEKKVEVLVDRELGCNYDRIDVGEMLQVALLCTQYLPAHRPKMSEVVRMLEGDGLAEKWAASHNHNNNNPTPNISHFNSHKSTWRPTTASKHDNIDHDGSSMFGTMMDEEDDDHSLDAHAMELSGPR* | 641 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9794579 | 9800507 | + | Vvi11g735 | Vvi11g735 | 772176 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g735 | 640 | Gene3D | Ribonuclease Inhibitor | 24 | 206 | IPR032675 | - | |
Vvi11g735 | 640 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 4 | 640 | - | - | |
Vvi11g735 | 640 | Pfam | Protein tyrosine and serine/threonine kinase | 296 | 563 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi11g735 | 640 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 4 | 640 | - | - | |
Vvi11g735 | 640 | SMART | serkin_6 | 294 | 549 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g735 | 640 | Pfam | Leucine rich repeat N-terminal domain | 25 | 64 | IPR013210 | - | |
Vvi11g735 | 640 | Pfam | Leucine rich repeat | 115 | 175 | IPR001611 | GO:0005515 | |
Vvi11g735 | 640 | Gene3D | Phosphorylase Kinase; domain 1 | 263 | 370 | - | - | |
Vvi11g735 | 640 | SUPERFAMILY | Protein kinase-like (PK-like) | 275 | 564 | IPR011009 | - | |
Vvi11g735 | 640 | MobiDBLite | consensus disorder prediction | 576 | 608 | - | - | |
Vvi11g735 | 640 | MobiDBLite | consensus disorder prediction | 576 | 598 | - | - | |
Vvi11g735 | 640 | PRINTS | Leucine-rich repeat signature | 117 | 130 | - | - | |
Vvi11g735 | 640 | PRINTS | Leucine-rich repeat signature | 162 | 175 | - | - | |
Vvi11g735 | 640 | ProSitePatterns | Protein kinases ATP-binding region signature. | 300 | 322 | IPR017441 | GO:0005524 | |
Vvi11g735 | 640 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 413 | 425 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi11g735 | 640 | Gene3D | Transferase(Phosphotransferase) domain 1 | 371 | 582 | - | - | |
Vvi11g735 | 640 | ProSiteProfiles | Protein kinase domain profile. | 294 | 573 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g735 | 640 | SUPERFAMILY | L domain-like | 25 | 288 | - | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76068 | PF00069 | Pkinase | 2.90E-42 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g735 | - | - | vvi:100244999 | 1224.15 |