Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g801 | ATGGCGTATGTGCATGGCCTTGGGCTGATCCACAGGGATCTAAAATCTGACAACTTGCTAATTTTTGCAGACAAGTCCATCAAAATTGCAGACTTTGGGGTTGCTCGAATAGAGGTGCAAACAGAAGGAATGACACCAGAGACAGGGACATACCGCTGGATGGCCCCGGAGATGATCCAGCACAGGCCTTACACACAGAAAGTCGACGTGTATAGCTTTGGGATCGTTCTTTGGGAACTCATCACTGGGATGCTTCCATTCCAGAACATGACTGCAGTTCAGGCAGCTTTTGCGATCATGACCCGATGCTGGGATGCCAACCCTGATGTGAGGCCTCCCTTCGCTGAAGTTGTAAGGATGCTTGAGAATGCAGAGACTGAAATTATGACGACTGTCCGCAAGGCCCGCTTCAGATGCTGTATGGCCCAACCAATGACTGCAGAGTGA | 447 | 50.11 | MAYVHGLGLIHRDLKSDNLLIFADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAIMTRCWDANPDVRPPFAEVVRMLENAETEIMTTVRKARFRCCMAQPMTAE* | 149 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 13477773 | 13485357 | + | Vvi11g801 | Vvi11g801 | 772242 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g801 | 148 | SMART | serkin_6 | 1 | 121 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g801 | 148 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 9 | 21 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi11g801 | 148 | ProSiteProfiles | Protein kinase domain profile. | 1 | 148 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g801 | 148 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 1 | 135 | - | - | |
Vvi11g801 | 148 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 145 | - | - | |
Vvi11g801 | 148 | Pfam | Protein kinase domain | 1 | 95 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g801 | 148 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 133 | IPR011009 | - | |
Vvi11g801 | 148 | PANTHER | BNAA09G41440D PROTEIN | 1 | 135 | - | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76070 | PF00069 | Pkinase | 1.60E-31 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g801 | - | - | vvi:100263908 | 293.123 |