Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g818 ATGTCAAGAACGGGGTATGGAGAAAAGAAGGTAGAGGTGGCAGTGGCAATAGATAAGGACAAAGGGAGTCAATATGCTCTTAAATGGGCTGTTGATCATCTTCTCAGCAAGGGCCAATCTGTAACACTCCTTCATATTAAACAAAAAGCATCTTCCATTCCCAACCCATTGGGGAATCAGGTCGCCATTTCCGATGTCAATGAAGATGTTGCAAGAGCTTACAAGCAGCAACTTGATAATCAGGCCAGGGAGTTGTTTCTTCCATTCCGATGCTTTTGTATGCGCAAGGATATTCAATGTAACGAAGTCATACTGGAAGGCACAGATATAACAAAAGCAATAATCGACTTTGTTACTGCCTCCTCAATTGAGATTTTAGTTGTTGGTGCCCCATCAAGGAGTGGATTTATCAGAAGATTCAAGACCACAGATGTACCAAGCAGTGTCTTGAAAGCAGCACCAGACTTTTGCACTGTGTATGTCATCTCTAAAGGAAAGATCACATCAGTGCGATCTGCCACACGTCCTGTACCGAATCCCTCTCCTCCCCCAACTGCATCTTCTCTCCATCAAAACCAAGCTAGCCCTACTCCTGATCCAACTGAAGCACATCTTAAACATAATCGCAGCACAAGAGCCTCTGAGAGGTCATCATTTGGACTCCGCAACTTGAACGACCTTGAAATCAAGTCACCCTTCACTAGAGGTAGAGCCTCACTAAGTAAATCTTATGGGGAGCTCTCAGTGCCAGAAACTGATATATCATTTGTAAGCTCAGGAAGGCCAAGCATCGATCACATTTTCCCGTTTTCAAGCTTTGCATCATCAGGAGGCAGGTCATCTGAGCTGAACTATTCACTTGACCTTTCATCATCCTCCAATGAAAGTGGGAGATTGTCATGGGCATCACAAAGCATGGAAGATGTGGAAGCTGAGATGAGGAGGCTCAAGCTTGAGCTCAAGCAAACAATGGACATGTACAGTACAGCTTGCAAGGAAGCACTGTCAGCAAAACAGACGGCAAGGGAACTCCATCGCTGGAAAATGGAAGAAGCACAGAGATTAGGAGAGGCAAGGCTAGCTGAGGAAGCTGCATTAGCAACTGCAGAGAGAGAGAAAGCAAAGGCTAAGGCAGCCCTTGAGGCAGCTGAAGCATCTCAGAGGATTGCTAAACTGGAAGCACAAAAGCGAATTAATGCAGAAATGGTAGCAATAAAAGAAGCAGAGGAAAGAAAGAAGATGCTAAATACTCTGGCACAAACTGATCTCAGGTACAGGAAATACACCATTGAGGAGATTGAAGCAGCAACTGAGTTATTTTCAGAGTCTCGGAAGATTGGGGAAGGAGGTTATGGCCCTGTATACAAGAGTTATTTGGATCATACACCAGTTGCAATAAAGGTTCTTCGTCCAGATGCAGCTCAAGGAAGGTCACAGTTTCAGCAGGAGGTTGAAGTACTAAGCTGCATACGGCATCCCAATATGGTTCTCCTCCTTGGGGCCTGTCCAGAGTATGGTTGCCTAGTCTATGAGTATATGGCTAATGGGAGCTTAGATGACCATCTCTTCCGGCGAGGGAACACCCCAGTTCTTCCATGGCAACTAAGATTCCAGATTGCGGCAGAGATAGGCACAGGTCTTCTTTTCCTCCACCAGACCAAGCCAGAACCATTAGTGCATCGTGACCTAAAACCTGGCAACATTTTGCTTGACCGTAACTTTGTCAGCAAGATCACAAACCGGAATGCTTGGAATAAAATCGGATATTTACTCACTCGGGATTATGCTTCTGCAAATAATTACTGCCAAACCCCCAATGGGTTTGACTCATTATGTGGAACGGGCTATTGA 1851 45.22 MSRTGYGEKKVEVAVAIDKDKGSQYALKWAVDHLLSKGQSVTLLHIKQKASSIPNPLGNQVAISDVNEDVARAYKQQLDNQARELFLPFRCFCMRKDIQCNEVILEGTDITKAIIDFVTASSIEILVVGAPSRSGFIRRFKTTDVPSSVLKAAPDFCTVYVISKGKITSVRSATRPVPNPSPPPTASSLHQNQASPTPDPTEAHLKHNRSTRASERSSFGLRNLNDLEIKSPFTRGRASLSKSYGELSVPETDISFVSSGRPSIDHIFPFSSFASSGGRSSELNYSLDLSSSSNESGRLSWASQSMEDVEAEMRRLKLELKQTMDMYSTACKEALSAKQTARELHRWKMEEAQRLGEARLAEEAALATAEREKAKAKAALEAAEASQRIAKLEAQKRINAEMVAIKEAEERKKMLNTLAQTDLRYRKYTIEEIEAATELFSESRKIGEGGYGPVYKSYLDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDHLFRRGNTPVLPWQLRFQIAAEIGTGLLFLHQTKPEPLVHRDLKPGNILLDRNFVSKITNRNAWNKIGYLLTRDYASANNYCQTPNGFDSLCGTGY* 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14180972 14186973 - Vvi11g818 Vvi11g818 772259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g818 616 Pfam Protein tyrosine and serine/threonine kinase 443 580 IPR001245 GO:0004672|GO:0006468
Vvi11g818 616 SUPERFAMILY Protein kinase-like (PK-like) 423 585 IPR011009 -
Vvi11g818 616 Pfam Universal stress protein family 13 154 IPR006016 -
Vvi11g818 616 SMART serkin_6 440 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g818 616 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 162 - -
Vvi11g818 616 Coils Coil 357 411 - -
Vvi11g818 616 Coils Coil 299 326 - -
Vvi11g818 616 MobiDBLite consensus disorder prediction 171 218 - -
Vvi11g818 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 558 570 IPR008271 GO:0004672|GO:0006468
Vvi11g818 616 PANTHER OS02G0152300 PROTEIN 270 580 - -
Vvi11g818 616 PANTHER OS02G0152300 PROTEIN 11 272 - -
Vvi11g818 616 Gene3D HUPs 12 164 IPR014729 -
Vvi11g818 616 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34 11 272 - -
Vvi11g818 616 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34 270 580 - -
Vvi11g818 616 ProSiteProfiles Protein kinase domain profile. 440 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g818 616 Gene3D Transferase(Phosphotransferase) domain 1 513 607 - -
Vvi11g818 616 Gene3D Phosphorylase Kinase; domain 1 417 512 - -
Vvi11g818 616 CDD STK_N 13 165 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76071 PF07714 PK_Tyr_Ser-Thr 4.80E-24 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g818 - - vvi:100262028 998.808