Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g819 ATGTCCCATAATTATTCACCTTGGCCTCTAATCTTCCTCGTCATCATCTCAGTGGTGCACATTAATGTTGCCTCTGGTGCCAAACCATCCCAGTCTGAAATTCTTCTCGAGTTTAAGAATTCTCTACGTAATGTTACTGCATTAGGCAGTTGGAACACATCCACTACGCCATGCGGTGGTTCGCCGGGAGGTTGGGTCGGTGTTATTTGCATAAATGGAGACGTCTGGGGATTACAACTGGAGGGTATGGGACTCATGGGCACCATTGACATGGACACCCTTGCGAAGTTGCCTCATCTGAGGGGTATAAGCTTCATGAACAATCATTTTGATGGGGCCATTCCAAAAATAAAGAAACTCAGTGCACTAAAGTCAGTTTTCTTATCCAACAACCAGTTTTCTGGGGAGATAGAGGATGATGCCTTTTCGGGTATGGTTTCGTTGAAGAAGGTGCATTTGGCACATAATAAGTTTTCAGGTGGGGTTCCTGAGTCCTTGGCTTTATTGCCTAGGATTTTGGAGTTGAGGTTGGAGGGGAACCATTTTAAAGGCCAGATACCTGAATTTAGAGCAACTCAATTGCAATCCTTCAACATATCCAACAATAACTTGGAAGGTCCGATCCCGGAAAGCCTTAGAAAGATGGAGTTGACCTCATTTTCAGGTAACAAAAATCTATGTGGAGCACCGTTGGGTTCATGTCCTCGGCCAAAGAAACCAACAACGCTAATGATGGTTGTTGTTGGAATCGTTGTGGCCTTGGCATTATCTGCCATCATTGTAGCCTTCATCCTCCTCCGCTGCAGCAAATGCCAAACAACTCTAGTACAAGTAGAGACTCCACCATCGAAAGTGACTTGTAGGGAGTTAGATAAGGTCAAGCTTCAAGAGTCTAACACTGAATCCGGGAAAAAGGTTGAGCAAGGAAAGTTGTACTACTTAAGGAATGATGAGAACAAGTGTGATTTGAAAGACTTGCTAAAAGCCTCAGCTGAAATATTAGGCAGTGGATACTTTGGCTCTTCTTACAAAGCTGTTCTGGTGAATGGGTCATCCGTGGTTGTTAAGAGGTTTAGACATATGAATAATGTTGGAAAAGAAGAGTTTCAAGAGCATATGAGAAGACTAGGGAGACTGAATCACCCCAATTTGCTTCCTTTTGTGGCTTACTACTACAGGGAGGAGGAGAAGCTCCTGGTTACTGACTTCATTGACAATGGCAGCTTGGCAATTCATCTTCATGGTAACCATGCTCGAGACCAACCAAGGCTCGATTGGGCAACTCGGTTGAAAATCATTAAAGGAATAGCCAAGGGCCTTGCATACCTCTATACTGAGCTCCCTACCCTAATTGCACCTCATAGCCACCTGAAATCTTCTAATGTTCTTCTTAGCAAGTCTTTCACGCCCCTGCTCACTGACTACGGTCTAGTACCCTTGATTAACCAGGAGATTGCCCAAGCGCTCATGGTCGCATATAAGTCACCAGAATACAAACAACATGGTCGGATAACAAAGAAGACCGACGTATGGAGTTTTGGGACATTGATACTAGAGATATTAACTGGAAAGTTTCCCACTCAAAATTTACAACAAGGTCAAGCAAGTGACACTGATTTGGCAAGTTGGGTGAATTCTGTTTCCCAGGAAGAGTGGGAAGATGAGGTGTTTGATAAAGAGATGGGAGGGACGACGAACAGTAAATGGGAGATGGTGAAGCTGTTGAAGATAGGGTTGGCTTGTTGTGAAGGGGATGTGGGAAAAAGGTGGGATATGAAGGAGGCAGTTGAGAAGATCGAAGAGTTAAAAGAGAAGGATAGCGAGGATGATTTCTATTCTTCATATGCCAGTGAAATGGAAAGCCCTTCAAGACAACTGTCAGATGAACCCTCTTTCTCATGA 1902 44.06 MSHNYSPWPLIFLVIISVVHINVASGAKPSQSEILLEFKNSLRNVTALGSWNTSTTPCGGSPGGWVGVICINGDVWGLQLEGMGLMGTIDMDTLAKLPHLRGISFMNNHFDGAIPKIKKLSALKSVFLSNNQFSGEIEDDAFSGMVSLKKVHLAHNKFSGGVPESLALLPRILELRLEGNHFKGQIPEFRATQLQSFNISNNNLEGPIPESLRKMELTSFSGNKNLCGAPLGSCPRPKKPTTLMMVVVGIVVALALSAIIVAFILLRCSKCQTTLVQVETPPSKVTCRELDKVKLQESNTESGKKVEQGKLYYLRNDENKCDLKDLLKASAEILGSGYFGSSYKAVLVNGSSVVVKRFRHMNNVGKEEFQEHMRRLGRLNHPNLLPFVAYYYREEEKLLVTDFIDNGSLAIHLHGNHARDQPRLDWATRLKIIKGIAKGLAYLYTELPTLIAPHSHLKSSNVLLSKSFTPLLTDYGLVPLINQEIAQALMVAYKSPEYKQHGRITKKTDVWSFGTLILEILTGKFPTQNLQQGQASDTDLASWVNSVSQEEWEDEVFDKEMGGTTNSKWEMVKLLKIGLACCEGDVGKRWDMKEAVEKIEELKEKDSEDDFYSSYASEMESPSRQLSDEPSFS* 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14214324 14218578 - Vvi11g819 Vvi11g819 772260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g819 633 SUPERFAMILY Protein kinase-like (PK-like) 332 602 IPR011009 -
Vvi11g819 633 SUPERFAMILY L domain-like 29 231 - -
Vvi11g819 633 Gene3D Phosphorylase Kinase; domain 1 293 403 - -
Vvi11g819 633 MobiDBLite consensus disorder prediction 614 633 - -
Vvi11g819 633 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 11 613 - -
Vvi11g819 633 MobiDBLite consensus disorder prediction 607 633 - -
Vvi11g819 633 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 613 - -
Vvi11g819 633 Gene3D Transferase(Phosphotransferase) domain 1 404 621 - -
Vvi11g819 633 Gene3D Ribonuclease Inhibitor 30 142 IPR032675 -
Vvi11g819 633 Pfam Leucine rich repeat 122 182 IPR001611 GO:0005515
Vvi11g819 633 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Vvi11g819 633 Gene3D Ribonuclease Inhibitor 143 235 IPR032675 -
Vvi11g819 633 ProSiteProfiles Protein kinase domain profile. 328 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g819 633 Pfam Protein tyrosine and serine/threonine kinase 332 535 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi9g1057 Vvi11g819 ECH
Vvi4g244 Vvi11g819 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76072 PF07714 PK_Tyr_Ser-Thr 2.40E-30 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g819 - - vvi:100265699 1245.72