Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g838 ATGAAATTTAAACATGAGAAGATCATTAAATTGAAATTTTCATTCAAAAAAAAAGAAGAGAGACTCAAGCTTTATATGAGAGTAATGAAATGTCTTGAATATTGTAGGAAAATTGACTTACACCAAGAAAGAGGTAATCAAAGCAAATGGTTCAGAGAAAAGGATCAACTAGGCGAAGATGCAGAAGAGCTTGTCCACGTCCCTCTTCAGGCCATTCTCTTGGCGGACAGCTTCGCCCAGAAGTTCCGCCCCATCACCCTTGAACGCCCCAAAGTACTGCTGCCATTGGTGAATGTTCCCATGATAGACTACACTTTAGCGTGGCTTGAGTCTACTGGGATTGAGGAGTTTTTTGTCTTTTGCTGTGTGCATTCGAAACAGGTTATCAACTATTTGGAGAATTCCCATTGGTTTTCTTTGCCACACTTTGATGTCACCACAATAGAGTCACACAATTCTGTCAGTGCCGGTGATGCGCTGCGTCTGATTTTCGAGCGGCATGTGATACATGAAGACTTCGTCCTTATTACTGGAGATACAGTAAGCAACATGTCACTTACACAGGAACTTCAAGAGCATAAGGATAGAAGGGAGAAGGATAATAATGCTGTAATGACTATGGTTATTAAACGGTCAAAGCCTTCTCCGATTACTCATCAATCTCAACTTGGTACTGATGAGCTGCTATGGCAATTGATCCTTACACAAAGCAACTTCTAG 720 41.11 MKFKHEKIIKLKFSFKKKEERLKLYMRVMKCLEYCRKIDLHQERGNQSKWFREKDQLGEDAEELVHVPLQAILLADSFAQKFRPITLERPKVLLPLVNVPMIDYTLAWLESTGIEEFFVFCCVHSKQVINYLENSHWFSLPHFDVTTIESHNSVSAGDALRLIFERHVIHEDFVLITGDTVSNMSLTQELQEHKDRREKDNNAVMTMVIKRSKPSPITHQSQLGTDELLWQLILTQSNF* 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14646164 14648005 - Vvi11g838 Vvi11g838 772279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g838 239 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 58 231 - -
Vvi11g838 239 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 57 227 IPR029044 -
Vvi11g838 239 SUPERFAMILY Nucleotide-diphospho-sugar transferases 67 226 IPR029044 -
Vvi11g838 239 Coils Coil 183 203 - -
Vvi11g838 239 Pfam Nucleotidyl transferase 71 213 IPR005835 GO:0009058|GO:0016779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g838 K03240 - vri:117924724 374.4