Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g866 ATGCTTGGCTGTAACAAAAAAGAAAAACCCCTGAAAGTTGAAGAAATTCAAATGGTTCATAGAAAAGGATCAACTAGGGTTTCGGAAGATGCAGAAGAGCTTGTCCGCGTCCCTCTTCAGGCCATTCTGTTGGCGGACAGCTTCGCCCAGAAGTTCCGTCCCATCACCCTTGAACGCCCCAAAGTACTGCTGCCATTGGTGAATGTCCCCATGATAGACTACACGTTAGGGTGGCTTGAGTCTGCTGGGATTGAGGAGGTTTTTGTCTTTTGCTGTGCGCATTCGAAACAGGTTATTAAATATTTGGAGAATTCCCATTGGTTTTCTTTGCAACACTTTGAGGTCACCACAATAGAGTCACACAATTCTGTCTGTGCCGGTGATGCTCTGCATCTGATTTACGAGCGGCATGTGATACATGGAGACTTCGTCCTTGTTACTGGAGATACAGTAAGCAACATGTTGCTTACACAGGCACTTCAAGAACATAAGGGTAGAAGGAAGAAGGATAATAATGTTGTAATGACTATGGTTATTAAACGGTCAAAGCCTTCTCTGATTACTCATCAATCTCGACTTGGAACTGATGAGCTGTTTATGGCAATTGATCCTTACACGAAGCAACTTCTATATTATGGGGATAAGGCAGACTGA 654 43.73 MLGCNKKEKPLKVEEIQMVHRKGSTRVSEDAEELVRVPLQAILLADSFAQKFRPITLERPKVLLPLVNVPMIDYTLGWLESAGIEEVFVFCCAHSKQVIKYLENSHWFSLQHFEVTTIESHNSVCAGDALHLIYERHVIHGDFVLVTGDTVSNMLLTQALQEHKGRRKKDNNVVMTMVIKRSKPSLITHQSRLGTDELFMAIDPYTKQLLYYGDKAD* 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15292425 15304390 - Vvi11g866 Vvi11g866 772307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g866 217 Pfam Nucleotidyl transferase 41 182 IPR005835 GO:0009058|GO:0016779
Vvi11g866 217 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 24 199 IPR029044 -
Vvi11g866 217 CDD eIF-2B_epsilon_N 39 212 IPR035543 -
Vvi11g866 217 SUPERFAMILY Nucleotide-diphospho-sugar transferases 36 202 IPR029044 -
Vvi11g866 217 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 26 214 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g866 K03240 - vvi:100265440 397.897