Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g866 | ATGCTTGGCTGTAACAAAAAAGAAAAACCCCTGAAAGTTGAAGAAATTCAAATGGTTCATAGAAAAGGATCAACTAGGGTTTCGGAAGATGCAGAAGAGCTTGTCCGCGTCCCTCTTCAGGCCATTCTGTTGGCGGACAGCTTCGCCCAGAAGTTCCGTCCCATCACCCTTGAACGCCCCAAAGTACTGCTGCCATTGGTGAATGTCCCCATGATAGACTACACGTTAGGGTGGCTTGAGTCTGCTGGGATTGAGGAGGTTTTTGTCTTTTGCTGTGCGCATTCGAAACAGGTTATTAAATATTTGGAGAATTCCCATTGGTTTTCTTTGCAACACTTTGAGGTCACCACAATAGAGTCACACAATTCTGTCTGTGCCGGTGATGCTCTGCATCTGATTTACGAGCGGCATGTGATACATGGAGACTTCGTCCTTGTTACTGGAGATACAGTAAGCAACATGTTGCTTACACAGGCACTTCAAGAACATAAGGGTAGAAGGAAGAAGGATAATAATGTTGTAATGACTATGGTTATTAAACGGTCAAAGCCTTCTCTGATTACTCATCAATCTCGACTTGGAACTGATGAGCTGTTTATGGCAATTGATCCTTACACGAAGCAACTTCTATATTATGGGGATAAGGCAGACTGA | 654 | 43.73 | MLGCNKKEKPLKVEEIQMVHRKGSTRVSEDAEELVRVPLQAILLADSFAQKFRPITLERPKVLLPLVNVPMIDYTLGWLESAGIEEVFVFCCAHSKQVIKYLENSHWFSLQHFEVTTIESHNSVCAGDALHLIYERHVIHGDFVLVTGDTVSNMLLTQALQEHKGRRKKDNNVVMTMVIKRSKPSLITHQSRLGTDELFMAIDPYTKQLLYYGDKAD* | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 15292425 | 15304390 | - | Vvi11g866 | Vvi11g866 | 772307 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g866 | 217 | Pfam | Nucleotidyl transferase | 41 | 182 | IPR005835 | GO:0009058|GO:0016779 | |
Vvi11g866 | 217 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 24 | 199 | IPR029044 | - | |
Vvi11g866 | 217 | CDD | eIF-2B_epsilon_N | 39 | 212 | IPR035543 | - | |
Vvi11g866 | 217 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 36 | 202 | IPR029044 | - | |
Vvi11g866 | 217 | PANTHER | TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON | 26 | 214 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g866 | K03240 | - | vvi:100265440 | 397.897 |