Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g870 ATGAAGAAATTTCCCTGTTTTGCAAGGAAACCGGTGGATGTTTTCAATCGTTCATCCACCAAATTGTCTTGCTTGCAACAATCTTTCAGGGGTCTGTTTTCTTCTTTGTTTTATTTCTTAGCCTTCCAGGTAAGCCCATTTTGGAATCAGCTTGGTTACTTCATCACTGTCTCTTTGCTGGGCTATATGGCTTTGAAGGTTTCGAAGCCGAAAACTACCTCATTTATGCCTTCGGACGTTGATGTGTTCTTTACATCGGTGTCTGCATCGACGGTTTCTAGCATGTCTGCGGTGGAAATGGAGGTTTTCTCCGATACCCAACTTGTTATCATGACCGTTTTGATGCTAGTGGGTGGAGAGATTTTCACTTCCATGCTTGGCCTCCAATTTGCGCAGAATGAGCAACCCTGTTCCAACTTAGAAAAAGGAATTGAAGCCTCATGTGACGAGGATTTGAAGTACCATTCTATTAAGTGTCTGGGTTATGTGGTTTTGTTTTACCTTCTAGTGGTTCATGTAGTTGGTTCGGCTTTGATAGTTTTGTATCTTAACCTTGTTCCAAGTGCAAGAGAAGTATTAAAGAACAAAGGCCTTCGAATACTAACATTTTCAGTGTTTACAGTGGTTTCTACCTTCTCAAACTGTGGTTTCATCCCCACAAATGAGAATATGGTGGTTTTCAAGAAGAATTCAGGTCTCCTCCTGATTCTTATTCCTCAGATCCTTCTTGGAAACACATTGTTTGCACCATGTTTGCGGTTTGTGATCTGGGTTTTGGTGAAGATCACAAGGCGAGTCGAATTCAACTACATGTTGAAGAACTCTAGGGAGATAAGCTATGATCACTTGCTTCCTGGTTTGTATTCATGTCTTCTGGCTATAACCGTTTTCGGGTTCATATTAGTACAGTTTTTACTTCTTTGCTTCATGGAATGGAATTCAGAAGACTTGGCTGGCCTAAATGCATATCAGAAAATCGTGGGCATGTTGTTTCAAACAGCAAATTCCAGGCATTCTGGTGAATCTATCTTTGATCTTTCAGTTATATCTCCAGCAGTCTTGGTGCTCTTTGTTCTAATGATGTATCTTCCACCTCATACTTCATTTTTACCCATAGATGGTGGTGAAAAGGCTTTGCAAAAGGAGGAAAGGAGGACAGAAAAAAGGAAGTATGTGGAGCATCTACTGTTATCACAACTCTCATATTTAGTCATCTTTGTTATTCTCGTTTGTATCATTGAGAGAGAGAAAATGAAAAAAGACCCCCTAAACTTCAGTGTGTTGAATATCACTATTGAAATCGTTAGTGCATATGGGAACGTGGGGTTCTCAGCCGGCTACCAATGTAACCTGCAACTCAAACACGAGCCCCACTGCAAAGACTTGTGTTATGGATTTGTTGGAAGATGGAGTAACAGTGGAAAATTTGTTCTCATGTTCGTCATGTTCTTTGGAAGACTAAAGAAATTCAGTATGCATGGTGGCAGAGCCTGGAAACTAGATTAG 1506 40.57 MKKFPCFARKPVDVFNRSSTKLSCLQQSFRGLFSSLFYFLAFQVSPFWNQLGYFITVSLLGYMALKVSKPKTTSFMPSDVDVFFTSVSASTVSSMSAVEMEVFSDTQLVIMTVLMLVGGEIFTSMLGLQFAQNEQPCSNLEKGIEASCDEDLKYHSIKCLGYVVLFYLLVVHVVGSALIVLYLNLVPSAREVLKNKGLRILTFSVFTVVSTFSNCGFIPTNENMVVFKKNSGLLLILIPQILLGNTLFAPCLRFVIWVLVKITRRVEFNYMLKNSREISYDHLLPGLYSCLLAITVFGFILVQFLLLCFMEWNSEDLAGLNAYQKIVGMLFQTANSRHSGESIFDLSVISPAVLVLFVLMMYLPPHTSFLPIDGGEKALQKEERRTEKRKYVEHLLLSQLSYLVIFVILVCIIEREKMKKDPLNFSVLNITIEIVSAYGNVGFSAGYQCNLQLKHEPHCKDLCYGFVGRWSNSGKFVLMFVMFFGRLKKFSMHGGRAWKLD* 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15393058 15395450 + Vvi11g870 Vvi11g870 772311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g870 501 PANTHER SODIUM TRANSPORTER HKT1 36 500 - -
Vvi11g870 501 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 36 500 - -
Vvi11g870 501 Pfam Cation transport protein 389 492 IPR003445 GO:0006812|GO:0008324|GO:0055085
Vvi11g870 501 Pfam Cation transport protein 86 363 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g870 K24976 - vvi:100260789 926.776