Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g875 ATGTCTTGTTTCCTTTTGTTTAAAGCACTCGTCCTCATCACTCTAGGCAGAAACGACTTTGTCAACAACTACTACTTGGTGCCCAACTCTACAAGATCTCGCCAATTTACTCTTCCCAATTATGTTTGCTATCTCATCTCTAAGTGCCGAAAAATTCTAATGAGGCTATATAAGCTTGGAACACGAAGGGTTTTTGTGACGGGCACTAGACCAATGGGGTGTGTACCAGCAAAACATGCATTTGGGTTTACAACATCAAAGATAGCATCTTGTGGGCAAGGACCCAACAATGGGCTCGGACTTTGCACGGTGCTCTCAAACCTGTGCCCCAACTGA 336 44.35 MSCFLLFKALVLITLGRNDFVNNYYLVPNSTRSRQFTLPNYVCYLISKCRKILMRLYKLGTRRVFVTGTRPMGCVPAKHAFGFTTSKIASCGQGPNNGLGLCTVLSNLCPN* 112
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15449614 15451000 + Vvi11g875 Vvi11g875 772316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g875 111 Gene3D SGNH hydrolase 5 79 IPR036514 -
Vvi11g875 111 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 79 111 - -
Vvi11g875 111 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 79 - -
Vvi11g875 111 Pfam GDSL-like Lipase/Acylhydrolase 9 80 IPR001087 GO:0016788
Vvi11g875 111 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 6 79 - -
Vvi11g875 111 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 79 111 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi9g1028 Vvi11g875 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g875 - - vvi:109124311 144.05