Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g882 ATGATGAACTCTGCTAGTTTCACCGGCAACAAACTTCATCGTCTTTGCACTTGTTCATCTTTCAAACTGGAATGTCTAGGCCGATCAATCTGCTTTCTAGTCTCATCCTTTTATCGTTTCGTAATTCTCCGGTTCAACACTTTCTCGGTTCAGCTTTGTTATTTCCTGTGTCTTTCATTTCAGGGATTCTGGGTCCTCAAGGCTTTGAAGCCGAGGACTCCTTTGAGGCCTAGAAACTTGGATTTGTTCTTCACCTCTGTGTCGGCAGCTACTGTTTCTAGCATGTCCACAGTGGAAATGGAGGTTTTTTCCAACAACCAGCTTCTGATTTTGACTCTTCTAATGTTTGTAGGCGGAGAGATTTTCACTTCGATGGTAGAACTCCAGTTGTGGAGGTCTAAACTTAAGAAACCATTGATAGCGGAAAACCAATTGCGGGTGGGCCGAACTAAGTCATTGTCTAGTGAGTCTCTCAAATACCATTCCATCAAATTTTTAGGCTTTGTGGTGATGGGGTACCTTGTAGTAGTTCATGTCCTTGGAGTCACACTAGTGTCTGCTTACATAGCCCTTGTGTCAAGTGCGAGAGATGTACTAAAGCAAAAGGGCCTCAAGCTCTTCACCTTTTCACTCTTCACCACAGTATCAACTCTTGCAAGTTGCGGTTTTGTCCCGACAAATGAAAACATGATAGTGTTCAGCAAGAACTCAGGCCTGCTTCTTATCATCATTCCTCAGGTCCTTCTCGGGAACACCTTGTTTCCCTCCTGCCTGCGTTTTTCCATATGGACTCTGGGGAAGTTTAAGAAAGTGGAGTCCAATTACCTGTTGACCAACACCAGGGAGATTGGATTTCTGCACTTGCTTCCTAGTCTCCATTCTACTCTTTTGGTTCCTACTGTTCTGGGCTTCATTCTGATACAGTTCACGTTGTTTTGCTCCATGGAGTGGAATTCAGAAGGGTTGAATGGCCTGAATTCTTATCAGAAAATCATCGGTGCCCTCTTCCAGAGCGTGAATTCAAGGCATACAGGCGAAACAATTGTGGATATCTCAATTCTCTCACCTGCCATCTTGGTGTTATTCGTCGTAATGATGTACCTTCCTCCTTATACTTCTTTCCTACCCACAAAAGGTGATGAACAGTCTTCAGAAATATGCAATGGAGGGAGGAAGAGAAGAAGGGGAAAGATTGTGGAGAATTTAATATTCTCACAACTATCGTACCTGGCCATCTTCATCATCCTTATCTGCATAACGGAGAGGAGAAAGATGAAAGATGATCCTCTCAACTTCACAGTGTTAAATATTGTGATAGAAGTAATCAGCTTGCAAGACCAGTACTTGTCTTCTTTGAAGAGAATCCAATTCCTAGTTGCCTATGGAAATGTTGGGTTTACAGCAGGCTACAGTTGTGAACGGTTGTTGAAACCTGATAGTAGCTGCCAAAGTAAATGGTTTGGATTCTCGGGAAAATGGAGTGACGAGGGGAAAATAATTCTCATTTTTGTCATGTTTTTTGGAAGACTAAAGAAGTTTAATATGGATGGAGGTAGAGCATGGAAGCTCTTGTAA 1575 42.67 MMNSASFTGNKLHRLCTCSSFKLECLGRSICFLVSSFYRFVILRFNTFSVQLCYFLCLSFQGFWVLKALKPRTPLRPRNLDLFFTSVSAATVSSMSTVEMEVFSNNQLLILTLLMFVGGEIFTSMVELQLWRSKLKKPLIAENQLRVGRTKSLSSESLKYHSIKFLGFVVMGYLVVVHVLGVTLVSAYIALVSSARDVLKQKGLKLFTFSLFTTVSTLASCGFVPTNENMIVFSKNSGLLLIIIPQVLLGNTLFPSCLRFSIWTLGKFKKVESNYLLTNTREIGFLHLLPSLHSTLLVPTVLGFILIQFTLFCSMEWNSEGLNGLNSYQKIIGALFQSVNSRHTGETIVDISILSPAILVLFVVMMYLPPYTSFLPTKGDEQSSEICNGGRKRRRGKIVENLIFSQLSYLAIFIILICITERRKMKDDPLNFTVLNIVIEVISLQDQYLSSLKRIQFLVAYGNVGFTAGYSCERLLKPDSSCQSKWFGFSGKWSDEGKIILIFVMFFGRLKKFNMDGGRAWKLL* 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15707761 15711764 + Vvi11g882 Vvi11g882 772323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g882 524 Pfam Cation transport protein 80 443 IPR003445 GO:0006812|GO:0008324|GO:0055085
Vvi11g882 524 PANTHER SODIUM TRANSPORTER HKT1 39 523 - -
Vvi11g882 524 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 39 523 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g882 K24976 - vvi:100248819 902.894