Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g897 | ATGGCTACCAAAAAGTGGCAGAAAAGCTACTTTGATGTGTTAGGTCTCTGCTGTTCATCAGAGGTCCCTCTGATTGAGAAGATTCTGAAGCCTCTAGATGGTGTCAAAGAGATTTCAGTCATTGTCCCATCCAGAACTCTCATTGTTGTCCATGACAATCTCCTCATTTCCCAGATTCAAATTGTTAAGGCACTAAACCAAGCAAGATTAGAGGCTAATGTTAGAATATATGGGGAAGTCGCTTATCAGAAGAAATGGCCTAGTCCTTTTGCAATTGTTTCTGGTATCTTACTCTTGCTATCATTTCTCAAATATGTGTATCAACCTTTCCGGTGGCTCGCTCTTGGAGCGGTTGCTGCCGGCATCTTTCCCATCGCCTGGAGAGGGATAGTGGCCATCCGAAACTTCACACTTGATATCAACATTCTTGTTCTCATCGCAGTGATTGGGACAATTGCTTTGAATGATTATTGGGAAGCTGGGTCCATAGTATTTCTCTTCACCATTGCAGAATGGCTTGAGTCAAGGGCTAGTCACAAGGCAACTGCAGTCATGTCATCGCTGATGAGTATAGCTCCTCAAAAGGCAGTGATAGCTGACACCGGAGAAATTGTAGAAGCCAACAGTGTCCTGGTGGACACAATCATCGCTGTTAAGACTGGAGAAGTCATACCTATTGATGGAATTGTAGTAGAAGGAAAATGTGAGGTCGATGAGAAGAGCTTAACAGGAGAGTCATTTCCAGTGGCCAAACAAAAGGACTCCACTGTTTGGGCTGGCACCATAAATCTAAATGGTTACATCAGTGTAAAAACTACAGCCCTAGCTGAGGACTGTGTGGTGGCCAAGATGGCAAAGCTAGTAGAAGAAGCTCAAAACAGCAAGTCCAAAACTCAGAGGTTCATAGACAAATGTACCAAGTTTTACACCCCAGTGGTAGTGCTAATATCGGCTGGGCTTGCGGGGATTCCTGCTGCCTTAAGGGTTCATGATCTAAGTCATTGGTTTCACCTATCACTGGTTGTACTAGTAAGTGCATGTCCATGTGCACTGATTCTCTCAACGCCAGTTGCTACATTCTGTGCACTTTCAAAGGCTGCTGTATCTGGGTTGCTCATCAAAGGAGGAGAGTATCTTGAAATTCTTGCTAAAATCAGGATCATGGCTTTTGACAAAACCGGTACAATTACAAGGGGTGAATTTGTTGTTAAGGATTTCCAGTCTCTGCGGGATGATGTTAGCTCCGATACATTGCTCTACTGGGTTTCTAGCATTGAGAGTAAGTCGAGTCATCCGATGGCAGCAGCTCTTTTTGATTATGGACTGTCACAATCCGTCGAGCCAAAGCCAGAAAATGTGGAAGAGTTTCAGAATTTTCCCGGGGAAGGAATCCATGGGAAAATTGATGGGAAAGACATCTATGTTGGAAACAGAAAAATCGCTCTAAGAGCTGGGTGTGAAACAGTTCCAACCATAGGAGAAGACAAGGAAGGAAAGACAATTGGGTATGTATACTCTGATGCAACTCCAACTGGAATTTTTACCCTCTCCGACGCTTGTCGAACAGGGGTTGTGGAGGCTATTAAAGAGCTGAAGTTATTGGGAATTAAATCTGCCATGCTTACAGGAGATAGTCATGCATCAGCTATGCATACACAAGATCAGCTAGGGCATACTCTAGAGGTTGTTCATGCAGAACTTTTACCTGAAGATAAGGCGAGAATCATAAAAGACTTTAAGGAGGAAGGACCAACAGCCATGATTGGTGATGGTGTAAATGATGCCCCTGCATTGGCCACAGCAGATATTGGTATCTCAATGGGCATTGCGGGTTCAGCACTTGCGACAGAGACAGGGCATGTGGTTCTTATGACAAATGATATTAGAAAAATACCCAAAGCTGTTCGGTTAGCAAGGAAAACCCACAGAAAAGTAGTTGAGAATGTCATTTTATCAATCACTACAAAGGCTGCCATCCTTGCCTTGGCCATTGCAGGTCACCCGCTTATTTGGGCAGCAGTTCTTGCTGATGTCGCCACTCATCTCATAATCATCAGCATAGTTGTTCCAACAGCATTTCTCAAAAGAAGTGTGAGCCTCAGAAGTGTTCTTCCCAGAGGTGTGCTTCAAGATGTCAGCCTGATCATTCCGGGTTGA | 2157 | 44.18 | MATKKWQKSYFDVLGLCCSSEVPLIEKILKPLDGVKEISVIVPSRTLIVVHDNLLISQIQIVKALNQARLEANVRIYGEVAYQKKWPSPFAIVSGILLLLSFLKYVYQPFRWLALGAVAAGIFPIAWRGIVAIRNFTLDINILVLIAVIGTIALNDYWEAGSIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAVIADTGEIVEANSVLVDTIIAVKTGEVIPIDGIVVEGKCEVDEKSLTGESFPVAKQKDSTVWAGTINLNGYISVKTTALAEDCVVAKMAKLVEEAQNSKSKTQRFIDKCTKFYTPVVVLISAGLAGIPAALRVHDLSHWFHLSLVVLVSACPCALILSTPVATFCALSKAAVSGLLIKGGEYLEILAKIRIMAFDKTGTITRGEFVVKDFQSLRDDVSSDTLLYWVSSIESKSSHPMAAALFDYGLSQSVEPKPENVEEFQNFPGEGIHGKIDGKDIYVGNRKIALRAGCETVPTIGEDKEGKTIGYVYSDATPTGIFTLSDACRTGVVEAIKELKLLGIKSAMLTGDSHASAMHTQDQLGHTLEVVHAELLPEDKARIIKDFKEEGPTAMIGDGVNDAPALATADIGISMGIAGSALATETGHVVLMTNDIRKIPKAVRLARKTHRKVVENVILSITTKAAILALAIAGHPLIWAAVLADVATHLIIISIVVPTAFLKRSVSLRSVLPRGVLQDVSLIIPG* | 719 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 16080036 | 16085813 | + | Vvi11g897 | Vvi11g897 | 772338 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g897 | 718 | ProSitePatterns | Hypothetical cof family signature 2. | 588 | 610 | - | - | |
Vvi11g897 | 718 | Gene3D | - | 2 | 76 | - | - | |
Vvi11g897 | 718 | ProSiteProfiles | Heavy-metal-associated domain profile. | 8 | 74 | IPR006121 | GO:0046872 | |
Vvi11g897 | 718 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED | 3 | 685 | - | - | |
Vvi11g897 | 718 | Gene3D | - | 178 | 292 | - | - | |
Vvi11g897 | 718 | CDD | P-type_ATPase_HM | 90 | 685 | - | - | |
Vvi11g897 | 718 | Gene3D | - | 382 | 639 | IPR023214 | - | |
Vvi11g897 | 718 | PRINTS | H+-transporting ATPase (proton pump) signature | 561 | 577 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi11g897 | 718 | PRINTS | H+-transporting ATPase (proton pump) signature | 588 | 604 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi11g897 | 718 | PRINTS | H+-transporting ATPase (proton pump) signature | 620 | 645 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi11g897 | 718 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED | 3 | 685 | - | - | |
Vvi11g897 | 718 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 139 | 666 | IPR023298 | - | |
Vvi11g897 | 718 | Pfam | haloacid dehalogenase-like hydrolase | 385 | 602 | - | - | |
Vvi11g897 | 718 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 140 | 685 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Vvi11g897 | 718 | SFLD | p-type atpase | 372 | 641 | IPR044492 | - | |
Vvi11g897 | 718 | SUPERFAMILY | Calcium ATPase, transduction domain A | 203 | 288 | IPR008250 | - | |
Vvi11g897 | 718 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 163 | 666 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi11g897 | 718 | SFLD | Haloacid Dehalogenase | 372 | 641 | - | - | |
Vvi11g897 | 718 | Pfam | E1-E2 ATPase | 199 | 367 | - | - | |
Vvi11g897 | 718 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 391 | 397 | IPR018303 | - | |
Vvi11g897 | 718 | TIGRFAM | ATPase-IB2_Cd: cadmium-translocating P-type ATPase | 140 | 685 | - | - | |
Vvi11g897 | 718 | SUPERFAMILY | HMA, heavy metal-associated domain | 4 | 73 | IPR036163 | GO:0046872 | |
Vvi11g897 | 718 | Gene3D | - | 400 | 520 | IPR023299 | GO:0000166 | |
Vvi11g897 | 718 | PRINTS | P-type cation-transporting ATPase superfamily signature | 238 | 252 | - | - | |
Vvi11g897 | 718 | PRINTS | P-type cation-transporting ATPase superfamily signature | 389 | 403 | - | - | |
Vvi11g897 | 718 | PRINTS | P-type cation-transporting ATPase superfamily signature | 534 | 544 | - | - | |
Vvi11g897 | 718 | PRINTS | P-type cation-transporting ATPase superfamily signature | 588 | 607 | - | - | |
Vvi11g897 | 718 | PRINTS | P-type cation-transporting ATPase superfamily signature | 612 | 624 | - | - | |
Vvi11g897 | 718 | SUPERFAMILY | HAD-like | 389 | 684 | IPR036412 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g897 | K01534 | - | vvi:100243678 | 1310.82 |