Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g907 ATGAGGGCCATGGAGCTTGGGTGTGCAGTTGTAGTTTTATTTAGCCTTTTGATTGCTGGAAATGCAGAGATTTACATCGTGACAGTTATAGGAGAGCCAGTTATAAGTTACAAGGGTGGTGTACCTGGTTTTGAAGCCACTGCTGTGGAATCTGATGAGACAATTGATGTTACTAGTGAATTGGTTACATCTTACTCTCGTCACCTTGAAATGAAGCACGACATGCTCCTATCGTTGCTGTTTGAGCATGGGACTTACAAGAAGCTCTACAGCTATCGGCATCTTATTAATGGCTTTGCAGTTCATATATCCCCAGAACAGGCAGAAGTCCTTAGACAGGCCCCAGGTGTGAAATCTGTGGAGAGAGATTGGAAGGTGAGAAGACTTACAACACATACTCCACAGTTTCTGGGGCTTCCAACTGGTGTATGGCCGACAGGAGGTGGCTTTGACAGGGCTGGAGAGGACATTGTGATAGGATTTGTGGACTCAGGTATTTTTCCTCACCATCCGAGCTTTGCCACCCACAACGTTGAACCATACGGGCCCATCCCTAAGTACAGAGGAAAATGTGAAGTTGATCCTGACACTAAAAGGAACTTCTGTAATGGGAAGATTGTTGGAGCCCAACATTTTGCAGAAGCTGCAATAGCAGCTGGTTCATTTAATCCTTCAGTTGATTTTGCTTCTCCTTTGGATGGTGATGGGCATGGAAGTCACACAGCAGCTATTGCAGCTGGAAATAATGGAATTCCAGTGAGAATGCATGGGTATGAATTTGGGAAAGCAAGTGGGATGGCTCCCCGTGCCAGGGTTGCTGTATACAAGGCACTCTACCGGCTTTTTGGAGGTTTTGTTGCAGATGTGGTAGCTGCAATTGATCAGGCTGTTCATGATGGTGTGGACATTCTCAATCTCTCTGTGGGGCCAAATAGTCCTCCAGCAACCACCAAGACCACGTTTTTAAACCCTTTTGATGCTGCACTTCTTTCAGCTGTGAAAGCAGGTGTATTTGTTGCACAGGCGGCTGGAAATGGGGGTCCTTTTCCCAAGTCCTTGTTGTCTTATAGTCCGTGGATTGCATCTGTAGCTGCAGCAATCGATGATCGTAGATACAAAAACCATCTTACTTTGGGAAATGGGAAAATCTTACCTGGAATTGGTTTGTCACCTTCTACACATTTCAATCGAACATTCACCCTGGTTGCTGCAAATGATGTGCTGCTGGATTCTTCGGTTGTGAAGTACAGTCCTTCAGACTGCCAAAGACCAGAAGTTCTAAACAAAAACTTGGTTGAAGGGAACATTCTTCTTTGTGGCTATTCCTTCAATTTTGTTGTTGGTACAGCATCAATCAAGAAGGTGTCAGAAACGGCCAAGAGTCTTGGTGCAATTGGGTTTGTTCTTGCTGTGGAAAATGTTTCTCCAGGAACAAAGTTTGATCCTGTTCCTGTCAGTATTCCTGGGATTCTCATCACAGAAGTCAGCAAATCAATGGATCTTATAGAGTACTATAATACATCCACTTCAAGAGATTGGACTGGACGAGTGAAGAGCTTTAAAGCTACAGGTAGCATTGGGGATGGATTGATGCCTATACTCCACAAATCAGCACCTCAGGTGGCATTATTTTCTGCTCGGGGACCCAATATAAGAGATTTCAACTTCCAAGATGCGGATCTTCTCAAACCAGATATTCTAGCTCCAGGTTCTCTCATTTGGGCTGCCTGGTCTCCAAATGGAACAGATGAGGCCAATTATGTTGGAGAAGGGTTTGCAATGATCTCTGGAACTAGCATGGCTGCACCACATATAGCTGGAATAGCTGCCCTTGTAAAGCAGAAACACCCTCATTGGAGCCCTGCTGCCATCAAATCAGCTTTAATGACGACATCAACAACGCTCGACAGAGCTGAAAACCCTCTTCGAGCACAGCAGTATTCTGGATCAGAAACTGTCACACTTGTCACTGCTACACCTTTTGATTATGGGAGTGGCCATGTTACTCCTAGAGCGGCTCTGGATCCTGGACTTATCTTTGATGCAGCTTATGAGGACTACATAGGGTTCTTGTGCACAACACCAGGAATTGATGCTCATGAGATAAAGAACTACACAAGCTTACCATGCAATTACACCATGGGCCGCCCATCAAATCTCAACACCCCATCAATCACAATCTCCCACCTTGTGGGAACTCAAACTGTCACTCGCACAGTCACAAATGTTGCTGGTCTAGAAACCTATGTGATCTCAACCAGAATGGCACCTGCAATTGCCGTTGAAGCCAACCCCCCAGCAATGACTCTGAAACCCGGTGCATCAAGGAAGTTCTCAGTGACACTGACCGCTCGATCAGTGACTGGAACCTACAGTTTTGGAGAAGTTTTGTTGAAAGGAAGCAGAGGACACAAGGTACGAATCCCTGTGGTAGCTATGGCTTATGATCGATAG 2454 45.52 MRAMELGCAVVVLFSLLIAGNAEIYIVTVIGEPVISYKGGVPGFEATAVESDETIDVTSELVTSYSRHLEMKHDMLLSLLFEHGTYKKLYSYRHLINGFAVHISPEQAEVLRQAPGVKSVERDWKVRRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIFPHHPSFATHNVEPYGPIPKYRGKCEVDPDTKRNFCNGKIVGAQHFAEAAIAAGSFNPSVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARVAVYKALYRLFGGFVADVVAAIDQAVHDGVDILNLSVGPNSPPATTKTTFLNPFDAALLSAVKAGVFVAQAAGNGGPFPKSLLSYSPWIASVAAAIDDRRYKNHLTLGNGKILPGIGLSPSTHFNRTFTLVAANDVLLDSSVVKYSPSDCQRPEVLNKNLVEGNILLCGYSFNFVVGTASIKKVSETAKSLGAIGFVLAVENVSPGTKFDPVPVSIPGILITEVSKSMDLIEYYNTSTSRDWTGRVKSFKATGSIGDGLMPILHKSAPQVALFSARGPNIRDFNFQDADLLKPDILAPGSLIWAAWSPNGTDEANYVGEGFAMISGTSMAAPHIAGIAALVKQKHPHWSPAAIKSALMTTSTTLDRAENPLRAQQYSGSETVTLVTATPFDYGSGHVTPRAALDPGLIFDAAYEDYIGFLCTTPGIDAHEIKNYTSLPCNYTMGRPSNLNTPSITISHLVGTQTVTRTVTNVAGLETYVISTRMAPAIAVEANPPAMTLKPGASRKFSVTLTARSVTGTYSFGEVLLKGSRGHKVRIPVVAMAYDR* 818
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 16593809 16604677 - Vvi11g907 Vvi11g907 772348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g907 817 Gene3D Peptidase S8/S53 domain 156 687 IPR036852 GO:0004252|GO:0006508
Vvi11g907 817 SUPERFAMILY Subtilisin-like 129 678 IPR036852 GO:0004252|GO:0006508
Vvi11g907 817 Pfam Peptidase inhibitor I9 63 127 IPR010259 -
Vvi11g907 817 ProSiteProfiles Serine proteases, subtilase domain profile. 123 674 - -
Vvi11g907 817 SUPERFAMILY Protease propeptides/inhibitors 86 127 - -
Vvi11g907 817 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 159 170 IPR023827 -
Vvi11g907 817 CDD PA_subtilisin_like 376 514 - -
Vvi11g907 817 Gene3D - 691 815 - -
Vvi11g907 817 Gene3D - 369 534 - -
Vvi11g907 817 Pfam Subtilase family 154 639 IPR000209 GO:0006508|GO:0008236
Vvi11g907 817 CDD Peptidases_S8_3 130 633 IPR034197 -
Vvi11g907 817 Pfam Fibronectin type-III domain 719 811 IPR041469 -
Vvi11g907 817 PRINTS Subtilisin serine protease family (S8) signature 596 612 IPR015500 -
Vvi11g907 817 PRINTS Subtilisin serine protease family (S8) signature 154 173 IPR015500 -
Vvi11g907 817 PRINTS Subtilisin serine protease family (S8) signature 233 246 IPR015500 -
Vvi11g907 817 PANTHER CUCUMISIN-RELATED 14 816 - -
Vvi11g907 817 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 128 IPR037045 -
Vvi11g907 817 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 816 IPR045051 -
Vvi11g907 817 ProSitePatterns Serine proteases, subtilase family, serine active site. 597 607 IPR023828 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g907 - - vvi:100245233 1629.38