Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11randomg8 ATGGCATTGCTTCGCAAATTGTTCTATCGTAAGCCGCCTGATGGGCTCCTCGAGATCTGTGATAGAGTTCACGTTTTTGATTGCTGCTTTACTACTGATGCTTGGGAAGAAGAAAACTATAAAGTTTACATCAGAGGCATAGTTGGTCAACTTCGAGATCACATTCCTGATGCCTGGCTCTCACTTGGGCCAAATAATTTGCTGCTAATGCACTGTGAACGGGGTGGTTGGCCAATTTTGGCATTCATGCTTGCTGCACTCCTGATATACCGGAAACACTACACTGGGGAGCAGAAAACTCTGGAGATGATCTACAAGCAGTCTCCTTGCGAGCTTTTACAGTGTCTGTCTCCACTGAATCCAGTTCCTTCTCAAACGAGGTATCTACAGTATATCTCAAGGAGAAATATGGCATCAGAATGGCCTCCATTGGATAGGGCACTCACCTTGGATTGCGTCATTATTAGATTAGTTCCTGATTTTGATGGAGAGGGGGGTTGCCGTCCAATATTTCGGATATATGGACAAGATCCATTCCTTGTTGCTGATCGGACTCCCAAATTGTTGTTTTCAACACCCAAAAAAAGTAAAACTATTCGACACTACAAGCAGGAGGAATGTGAACTAGTTAAAATTGACATCAATTGCCATATTCAAGGAGATGTTGTGCTCGAGTGTATTAACTTGAATGATGACACAGAATATGAGGAAATGATATTTCGGCTCATGTTTAACACAGCTTTTATAAGGTCAAATATTTTAATGCTTAATCGTGATGAAATCGATATATTGTGGAATGCTAAGGATCAATTTCCAAAGGATTTTAGAGCAGAGGTTCTTTTTTCAGATATGGATGCTGCTGCTTCTGTTGTTACAGTGGATTTGTCTTGCTTTGAGGAGAAGGATGGACTTCCAGTGGAAGCATTTGCCAAAGTTCATGAAATTTTTAGCCATGTGGATTGGCTAGATCCAAAAACAGATGCTGCTTTAAATGTGCTTCAACAAATAACCGCATCAAATGTTGTCCAAGGAAGGGTAGAAACTGATTCCCCTGGGAGCGTAGAAACTAGCACTTCATTGCAGGAATTAATTACTGAAAAGGTTCAGGGGAAACAGAAGCCAGCATCTTCAGAGGATAATGCTGAGAAATTTTCATCCTTTGCTCTAGAGAATAAGCATTTCCTGTCACAAAAACCATCTGAAGGTGCAGATGTGAATGAAAGGAAGGCTGAGCCTCAACTTCAGGAGAGACAACAGACTGCAGCAATGGAAAGAGAAACTATGAACTCCACAACCTTCAGTATAAAGAATGATTCTGGGTCCTCATCAGAGCCATCTACATTTGCAGACATGAGTAAGAAGAAGCCTGTGTCAAGATACCATAGTTCATCCTCAGCAACCGGCATTACGCCTCTGTTTCCTGAATATATCTCATCAGACCCAAGCCTAGATTTTTCAGATGCGCATAAATCTGTGGAGCAGAAAGGTGTTTCGATTTCACCACCAACACCACTAGGCCCACACCAACCGCTTCCAATTCAACCAACCTTGACAGCCACTTCCAAATCAACACACCTTACACTTGCCAAACAATCTGAAAAATATTTACAAGGTAGAGATCAGTCATCATTGGTTCCTCCACTACCTGCACCTGAGACTCCAGTTTCAAGTATCAGTTTTCATGAATCATCATCTAATTCCACTTCCCCCTCTCCAGCTCTTATCAGCTGTACCACCTCCACCTCCACCTCCACCTCCACCTCCACCTCCTTCTCATTCTGGAAAAACTACTTAACAAGGGCAGTGTCAGGAAGCTTATGGGCTGAGACACAAAAATCTGGTGAAGCTTCCAAGGCTCCAGAGATTGATATGTCAGAGCTTGAGAGCCTTTTCTCTGCAGCAGCTCCAAAATCAGATCATGGGAACTCTAGTGGGAAATCAAATTTGCGCGCCCCAGCTGGGTCTAAATTTGACAAAGTGCAACTGATTGAACACAGGAGAGCCTACAATTGTGAAATCATGCTTTCGAAGGTGAAGGTGCCATTGCATGAATTAATGAATTCAGTGCTTGCTTTAGAGGATTCAGCTTTAGATGTTGATCAGGTTGATAACCTCATAAAGTTTTGTCCAACAAAAGACGAGATCGAGCTACTTAAGGGCTACAAGGGAGAAAAGGAAAAGTTAGGAAAATGTGAACAGTTCTTGTTAGAGTTGATGCAAGTACCACGAGTAGAAACTAAGCTCAGAGTTTTCTCATTTAAAATACAGTTTCCTTCCCTGGTTTCTTATCTTAGAACAAGCCTAAATGTTGTAAATTCTGCAGCAGAAGAGGCAAGTTATTCTCCTATAAAAAACTCTCTGAAATTGAAAAGAATCATGCAGACAATCCTTCAATTAGGAAATGCTTTGAACCAGGGAACTTCTAGAGGCTCTGCTATTGGATTTAGGTTGGATAGCCTTCTCAAAATTGCTGATACACGCGCCCGGAACAAAAAGACAACTCTCATGCATTACCTTTGTAAGGTGCTTGCTGATAAACTACCAGAAGTTTTAGATTTTTCTAAAGACCTTGCCAGCTTGGAACCTGCATCAAAGATACAACTGAAATTTTTGGCAGAGGAAATGCAAGCGATTAGCAAAGGATTGGAGAAAGTTATGCAGGAATTGTCCAGCTCCGAAAATGATGGTCCTATATCTGAAAATTTCTGTAAGACTCTGAAGAAGTTCCTTCATTTTGCTGAAACTGAAGTGAGATCTTTGGCTTCATTGTACTCTGGGGTGGGTAGGAATGTGGATGCACTGATTCTTTATTTTGGTGAAGATCCAGCTCGCTGCCCATTTTGA 2844 41.7 MALLRKLFYRKPPDGLLEICDRVHVFDCCFTTDAWEEENYKVYIRGIVGQLRDHIPDAWLSLGPNNLLLMHCERGGWPILAFMLAALLIYRKHYTGEQKTLEMIYKQSPCELLQCLSPLNPVPSQTRYLQYISRRNMASEWPPLDRALTLDCVIIRLVPDFDGEGGCRPIFRIYGQDPFLVADRTPKLLFSTPKKSKTIRHYKQEECELVKIDINCHIQGDVVLECINLNDDTEYEEMIFRLMFNTAFIRSNILMLNRDEIDILWNAKDQFPKDFRAEVLFSDMDAAASVVTVDLSCFEEKDGLPVEAFAKVHEIFSHVDWLDPKTDAALNVLQQITASNVVQGRVETDSPGSVETSTSLQELITEKVQGKQKPASSEDNAEKFSSFALENKHFLSQKPSEGADVNERKAEPQLQERQQTAAMERETMNSTTFSIKNDSGSSSEPSTFADMSKKKPVSRYHSSSSATGITPLFPEYISSDPSLDFSDAHKSVEQKGVSISPPTPLGPHQPLPIQPTLTATSKSTHLTLAKQSEKYLQGRDQSSLVPPLPAPETPVSSISFHESSSNSTSPSPALISCTTSTSTSTSTSTSFSFWKNYLTRAVSGSLWAETQKSGEASKAPEIDMSELESLFSAAAPKSDHGNSSGKSNLRAPAGSKFDKVQLIEHRRAYNCEIMLSKVKVPLHELMNSVLALEDSALDVDQVDNLIKFCPTKDEIELLKGYKGEKEKLGKCEQFLLELMQVPRVETKLRVFSFKIQFPSLVSYLRTSLNVVNSAAEEASYSPIKNSLKLKRIMQTILQLGNALNQGTSRGSAIGFRLDSLLKIADTRARNKKTTLMHYLCKVLADKLPEVLDFSKDLASLEPASKIQLKFLAEEMQAISKGLEKVMQELSSSENDGPISENFCKTLKKFLHFAETEVRSLASLYSGVGRNVDALILYFGEDPARCPF* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11randomg8 947 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 147 284 IPR035892 -
Vvi11randomg8 947 ProSiteProfiles Formin homology-2 (FH2) domain profile. 579 947 IPR015425 -
Vvi11randomg8 947 SMART it6_source 350 946 IPR015425 -
Vvi11randomg8 947 MobiDBLite consensus disorder prediction 415 449 - -
Vvi11randomg8 947 Pfam C2 domain of PTEN tumour-suppressor protein 146 282 IPR014020 -
Vvi11randomg8 947 MobiDBLite consensus disorder prediction 484 516 - -
Vvi11randomg8 947 ProSiteProfiles C2 tensin-type domain profile. 145 284 IPR014020 -
Vvi11randomg8 947 MobiDBLite consensus disorder prediction 458 472 - -
Vvi11randomg8 947 Pfam Formin Homology 2 Domain 583 945 IPR015425 -
Vvi11randomg8 947 SMART PTEN_C2_2 143 283 IPR014020 -
Vvi11randomg8 947 MobiDBLite consensus disorder prediction 556 589 - -
Vvi11randomg8 947 MobiDBLite consensus disorder prediction 395 472 - -
Vvi11randomg8 947 Gene3D Protein tyrosine phosphatase superfamily 53 138 IPR029021 -
Vvi11randomg8 947 MobiDBLite consensus disorder prediction 533 589 - -
Vvi11randomg8 947 Gene3D Formin, FH2 domain 599 947 IPR042201 -
Vvi11randomg8 947 SUPERFAMILY Formin homology 2 domain (FH2 domain) 658 946 - -
Vvi11randomg8 947 Coils Coil 868 888 - -
Vvi11randomg8 947 Gene3D - 142 287 - -
Vvi11randomg8 947 PANTHER FORMIN-J 1 943 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11randomg8 - - vvi:100249846 993.801