Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11randomg9 ATGGCGGATTCGGGTAAAGATTCGTGCCCGTCTTTGCTTCACGGTAAATACGAGCTGGGACGGCTTCTGGGTCACGGCACCTTCGCCAAGGTGTATCATGCCCGGAACTTGCAGACAGGGAAGAGTGTAGCGATGAAAGTGGTGGGTAAGGATAAGGTGATAAAAGTGGGGATGACGGAGCAGGTGAAGAGGGAGATATCAGTTATGAAGATGGTACAGCATCCCAATATTGTTGAGCTTCACGAAGTCATGGCCAGCAAGTCCAAGATCTACTTCGCCATGGAGCTCGTCCGCGGCGGCGAGCTTTTCTCCAAGATCTCCAAAGGGCGGTTGAGGGAGGACGTTGCTAGAGTGTACTTCCAGCAGCTGATCTCGGCGGTGGACTTTTGCCACAGCCGCGGAGTCTACCACCGGGATCTGAAGCCGGAGAATCTACTCCTCGACGAGTCTGGCAACTTGAAAGTGATTGGAAAGAATGGGTATGATGGGGCAAAGGCCGATCTGTGGTCGTGCGGTGTGATTCTGTACGTTCTTCTCGCCGGATTCTTGCCGTTTCAGGACGACAACATTGTGGCCATGTATAGGAAGATCTACAGAGGAGACTTTAAGTGTCCGCCTTGGTTTTCACCCGAATCTCGCAGACTCGTCACGAAACTCCTCGATCCAACCCCCAACACTCGAATCACCATAGCCAAGATCGTGGAATCCTCCTGGTTCAAAAAGTCGGTGCCCAAAACGATACTAACCAAAGAGGAACAAGAATTCGAGTCATTCAATTGCGGAAAAGCAAAGCAGCCGGAGACCCTGAACGCGTTCCACATCATCTCCCTATCGGAGGGGTTCGATCTGTCACCTTTGTTCGAAGAGAAGAAGAGAGAGCAAAAGGAGGAACTGAGGTTCGCGACGACGCAGCCAGCGAGCAGCGTGATATCGAAACTGGAGGAGGAAAGAGGAAGAAAAGGGAAATTAGCGATAGGAGCGGAGATATTCGCAGTGGCGCCGTCTTTCCTGGTGGTGGAGGTGAAGAAGCACCATGGTGATAGCCTGGAGTACGACCAGTTCTGCAACAAGGAGCTCCGGCCGGCTCTCAAGGACATAGTTTGGACGTCCACCCCAGCCTGA 1122 52.58 MADSGKDSCPSLLHGKYELGRLLGHGTFAKVYHARNLQTGKSVAMKVVGKDKVIKVGMTEQVKREISVMKMVQHPNIVELHEVMASKSKIYFAMELVRGGELFSKISKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDESGNLKVIGKNGYDGAKADLWSCGVILYVLLAGFLPFQDDNIVAMYRKIYRGDFKCPPWFSPESRRLVTKLLDPTPNTRITIAKIVESSWFKKSVPKTILTKEEQEFESFNCGKAKQPETLNAFHIISLSEGFDLSPLFEEKKREQKEELRFATTQPASSVISKLEEERGRKGKLAIGAEIFAVAPSFLVVEVKKHHGDSLEYDQFCNKELRPALKDIVWTSTPA* 374
       

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11randomg9 373 ProSiteProfiles NAF domain profile. 264 288 IPR018451 GO:0007165
Vvi11randomg9 373 CDD CIPK_C 270 364 - -
Vvi11randomg9 373 Gene3D Transferase(Phosphotransferase) domain 1 157 264 - -
Vvi11randomg9 373 Gene3D Kinase associated domain 1, KA1 315 369 - -
Vvi11randomg9 373 Gene3D Kinase associated domain 1, KA1 265 314 - -
Vvi11randomg9 373 Gene3D Transferase(Phosphotransferase) domain 1 10 156 - -
Vvi11randomg9 373 SMART serkin_6 17 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11randomg9 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Vvi11randomg9 373 ProSitePatterns Protein kinases ATP-binding region signature. 23 50 IPR017441 GO:0005524
Vvi11randomg9 373 ProSiteProfiles Protein kinase domain profile. 17 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11randomg9 373 Pfam NAF domain 266 315 IPR004041 GO:0007165
Vvi11randomg9 373 Pfam Protein kinase domain 17 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11randomg9 373 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 155 371 - -
Vvi11randomg9 373 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 9 156 - -
Vvi11randomg9 373 SUPERFAMILY Protein kinase-like (PK-like) 14 253 IPR011009 -
Vvi11randomg9 373 PANTHER - 9 156 - -
Vvi11randomg9 373 PANTHER - 155 371 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11randomg9 - - K07198 vvi:100241657 707.983
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Vvi5g262 . 34 387 CBL-interacting serine-threonine protein kinases AT3G17510 71.3 3.5e-143 505.0
Vvi6g908 ECH 78 427 CBL-interacting serine-threonine protein kinases AT3G17510 51.1 2.0e-98 356.3
Vvi15g629 . 76 427 CBL-interacting serine-threonine protein kinases AT3G17510 50.8 5.5e-96 348.2
Vvi14g1585 . 90 278 CBL-interacting serine-threonine protein kinases AT3G17510 51.0 3.5e-50 196.1
Vvi8g370 ECH 1 362 CBL-interacting serine-threonine protein kinases AT5G07070 55.9 1.4e-128 456.8
Vvi15g629 . 12 429 CBL-interacting serine-threonine protein kinases AT5G07070 52.3 1.3e-123 440.3
Vvi10g470 . 14 445 CBL-interacting serine-threonine protein kinases AT5G07070 53.2 5.1e-123 438.3
Vvi6g908 ECH 12 429 CBL-interacting serine-threonine protein kinases AT5G07070 51.5 1.5e-119 426.8
Vvi11randomg9 . 10 368 CBL-interacting serine-threonine protein kinases AT5G07070 50.1 7.6e-111 397.9
Vvi13g140 ECH 1 219 CBL-interacting serine-threonine protein kinases AT5G07070 61.0 7.4e-90 328.2
Vvi6g908 ECH 5 411 CBL-interacting serine-threonine protein kinases AT2G26980 83.5 2.2e-197 685.3
Vvi15g629 . 9 391 CBL-interacting serine-threonine protein kinases AT2G26980 70.1 1.6e-158 556.2
Vvi10g470 . 11 418 CBL-interacting serine-threonine protein kinases AT2G26980 68.3 4.2e-156 548.1
Vvi11g480 . 2 411 CBL-interacting serine-threonine protein kinases AT2G26980 56.6 3.1e-130 462.2
Vvi18g555 . 5 414 CBL-interacting serine-threonine protein kinases AT2G26980 55.3 3.5e-126 448.7
Vvi11g1070 . 7 406 CBL-interacting serine-threonine protein kinases AT2G26980 50.2 1.7e-109 393.3
Vvi5g262 . 14 365 CBL-interacting serine-threonine protein kinases AT2G26980 52.5 6.6e-101 364.8
Vvi14g1585 . 25 278 CBL-interacting serine-threonine protein kinases AT2G26980 52.5 3.7e-75 279.3
Vvi5g593 . 43 413 CBL-interacting serine-threonine protein kinases AT4G14580 50.8 8.1e-107 384.4
Vvi9g776 . 9 417 CBL-interacting serine-threonine protein kinases AT5G10930 61.8 5.6e-151 531.2
Vvi10g470 . 9 436 CBL-interacting serine-threonine protein kinases AT5G10930 51.4 1.3e-120 430.3
Vvi15g629 . 7 429 CBL-interacting serine-threonine protein kinases AT5G10930 50.2 5.1e-112 401.7
Vvi8g375 ECH 45 320 CBL-interacting serine-threonine protein kinases AT5G10930 51.4 1.8e-85 313.5
Vvi13g140 ECH 1 230 CBL-interacting serine-threonine protein kinases AT5G10930 52.0 2.7e-76 283.1
Vvi11randomg9 . 2 374 CBL-interacting serine-threonine protein kinases AT4G30960 68.3 3.3e-159 558.5
Vvi10g470 . 5 438 CBL-interacting serine-threonine protein kinases AT4G30960 55.8 1.2e-132 470.3
Vvi15g629 . 11 431 CBL-interacting serine-threonine protein kinases AT4G30960 54.0 1.8e-125 446.4
Vvi6g908 ECH 11 429 CBL-interacting serine-threonine protein kinases AT4G30960 53.8 6.8e-125 444.5
Vvi9g776 . 15 412 CBL-interacting serine-threonine protein kinases AT4G30960 52.0 9.6e-119 424.1
Vvi10g228 . 7 350 CBL-interacting serine-threonine protein kinases AT4G30960 51.8 8.4e-115 411.0
Vvi8g370 ECH 7 362 CBL-interacting serine-threonine protein kinases AT4G30960 52.1 3.0e-112 402.5
Vvi11g480 . 9 429 CBL-interacting serine-threonine protein kinases AT4G30960 50.1 3.3e-111 399.1
Vvi13g140 ECH 11 218 CBL-interacting serine-threonine protein kinases AT4G30960 57.0 6.1e-81 298.5
Vvi18g555 . 2 395 CBL-interacting serine-threonine protein kinases AT4G24400 80.7 4.4e-182 634.4
Vvi11g480 . 4 390 CBL-interacting serine-threonine protein kinases AT4G24400 69.5 1.5e-158 556.2
Vvi6g908 ECH 6 390 CBL-interacting serine-threonine protein kinases AT4G24400 59.5 7.1e-132 467.6
Vvi10g470 . 11 397 CBL-interacting serine-threonine protein kinases AT4G24400 59.8 2.7e-131 465.7
Vvi15g629 . 9 390 CBL-interacting serine-threonine protein kinases AT4G24400 58.4 1.1e-129 460.3
Vvi11g1070 . 3 368 CBL-interacting serine-threonine protein kinases AT4G24400 51.2 6.7e-106 381.3
Vvi14g1585 . 22 277 CBL-interacting serine-threonine protein kinases AT4G24400 51.0 1.4e-74 277.3
Vvi8g469 ECH 75 345 CBL-interacting serine-threonine protein kinases AT4G24400 50.5 7.5e-73 271.6
Vvi15g629 . 4 441 CBL-interacting serine-threonine protein kinases AT1G01140 78.3 2.4e-202 701.8
Vvi10g470 . 9 445 CBL-interacting serine-threonine protein kinases AT1G01140 70.9 8.1e-182 633.6
Vvi6g908 ECH 4 439 CBL-interacting serine-threonine protein kinases AT1G01140 68.6 2.4e-173 605.5
Vvi11g480 . 7 434 CBL-interacting serine-threonine protein kinases AT1G01140 55.2 6.7e-136 481.1
Vvi18g555 . 6 434 CBL-interacting serine-threonine protein kinases AT1G01140 54.8 2.9e-131 465.7
Vvi11g1070 . 7 416 CBL-interacting serine-threonine protein kinases AT1G01140 50.8 5.2e-112 401.7
Vvi5g262 . 14 380 CBL-interacting serine-threonine protein kinases AT1G01140 51.3 1.5e-106 383.6
Vvi10g228 . 36 349 CBL-interacting serine-threonine protein kinases AT1G01140 53.9 1.6e-100 363.6
Vvi8g370 ECH 1 362 CBL-interacting serine-threonine protein kinases AT5G58380 56.5 3.9e-134 475.3
Vvi10g470 . 14 444 CBL-interacting serine-threonine protein kinases AT5G58380 53.7 9.4e-128 454.1
Vvi15g629 . 12 440 CBL-interacting serine-threonine protein kinases AT5G58380 51.3 3.3e-125 445.7
Vvi6g908 ECH 12 437 CBL-interacting serine-threonine protein kinases AT5G58380 51.6 6.3e-124 441.4
Vvi13g140 ECH 1 219 CBL-interacting serine-threonine protein kinases AT5G58380 63.2 5.7e-93 338.6
Vvi6g746 ECH 1 402 CBL-interacting serine-threonine protein kinases AT2G30360 60.6 1.3e-139 493.4
Vvi8g375 ECH 18 395 CBL-interacting serine-threonine protein kinases AT2G30360 55.0 2.4e-122 436.0
Vvi10g470 . 4 426 CBL-interacting serine-threonine protein kinases AT4G18700 53.7 4.6e-130 461.8
Vvi15g629 . 10 416 CBL-interacting serine-threonine protein kinases AT4G18700 53.1 8.1e-127 451.1
Vvi6g908 ECH 10 419 CBL-interacting serine-threonine protein kinases AT4G18700 50.7 3.2e-123 439.1
Vvi6g746 ECH 16 395 CBL-interacting serine-threonine protein kinases AT4G18700 51.8 5.6e-120 428.3
Vvi8g375 ECH 26 395 CBL-interacting serine-threonine protein kinases AT4G18700 52.2 5.6e-120 428.3
Vvi10g229 . 99 346 CBL-interacting serine-threonine protein kinases AT4G18700 61.2 1.2e-106 384.0
Vvi13g140 ECH 7 220 CBL-interacting serine-threonine protein kinases AT4G18700 53.4 3.1e-78 289.7
Vvi8g375 ECH 31 396 CBL-interacting serine-threonine protein kinases AT5G01820 61.0 9.9e-140 493.8
Vvi6g746 ECH 22 402 CBL-interacting serine-threonine protein kinases AT5G01820 58.4 7.8e-137 484.2
Vvi6g908 ECH 3 405 CBL-interacting serine-threonine protein kinases AT5G01820 50.7 1.5e-108 390.2
Vvi15g629 . 12 428 CBL-interacting serine-threonine protein kinases AT5G01810 51.2 3.1e-110 395.6
Vvi6g908 ECH 12 428 CBL-interacting serine-threonine protein kinases AT5G01810 50.5 5.0e-108 388.3
Vvi8g370 ECH 1 364 CBL-interacting serine-threonine protein kinases AT5G01810 51.3 1.1e-107 387.1
Vvi13g140 ECH 1 219 CBL-interacting serine-threonine protein kinases AT5G01810 58.4 5.3e-86 315.1
Vvi8g375 ECH 48 280 CBL-interacting serine-threonine protein kinases AT5G01810 55.7 1.6e-85 313.5
Vvi9g776 . 14 415 CBL-interacting serine-threonine protein kinases AT2G25090 58.6 4.0e-139 491.9
Vvi5g262 . 44 389 CBL-interacting serine-threonine protein kinases AT1G48260 68.3 1.1e-133 473.4
Vvi14g1585 . 100 278 CBL-interacting serine-threonine protein kinases AT1G48260 51.1 2.4e-48 189.9
Vvi10g470 . 12 439 CBL-interacting serine-threonine protein kinases AT5G45810 52.9 1.6e-127 453.4
Vvi15g629 . 10 416 CBL-interacting serine-threonine protein kinases AT5G45810 50.8 1.2e-122 437.2
Vvi6g908 ECH 10 416 CBL-interacting serine-threonine protein kinases AT5G45810 50.2 3.8e-121 432.2
Vvi8g375 ECH 45 395 CBL-interacting serine-threonine protein kinases AT5G45810 50.8 3.9e-113 405.6
Vvi10g229 . 99 346 CBL-interacting serine-threonine protein kinases AT5G45810 59.6 2.6e-101 366.3
Vvi13g140 ECH 3 220 CBL-interacting serine-threonine protein kinases AT5G45810 52.2 2.6e-77 286.6
Vvi10g228 . 1 365 CBL-interacting serine-threonine protein kinases AT5G45820 56.3 5.9e-137 484.6
Vvi10g470 . 5 437 CBL-interacting serine-threonine protein kinases AT5G45820 56.6 1.7e-136 483.0
Vvi15g629 . 12 434 CBL-interacting serine-threonine protein kinases AT5G45820 54.8 1.1e-130 463.8
Vvi9g776 . 9 427 CBL-interacting serine-threonine protein kinases AT5G45820 54.2 1.2e-129 460.3
Vvi8g370 ECH 1 362 CBL-interacting serine-threonine protein kinases AT5G45820 56.1 3.4e-124 442.2
Vvi6g908 ECH 12 430 CBL-interacting serine-threonine protein kinases AT5G45820 52.9 5.8e-124 441.4
Vvi11randomg9 . 12 368 CBL-interacting serine-threonine protein kinases AT5G45820 54.8 6.4e-123 438.0
Vvi13g140 ECH 1 220 CBL-interacting serine-threonine protein kinases AT5G45820 58.5 3.5e-89 325.9
Vvi11g1070 . 87 421 CBL-interacting serine-threonine protein kinases AT5G57630 64.6 1.2e-113 406.8
Vvi8g469 ECH 156 332 CBL-interacting serine-threonine protein kinases AT5G57630 50.6 9.8e-44 174.5
Vvi8g375 ECH 45 396 CBL-interacting serine-threonine protein kinases AT2G38490 54.5 3.4e-113 405.6
Vvi6g746 ECH 18 398 CBL-interacting serine-threonine protein kinases AT2G38490 52.5 5.5e-111 398.3
Vvi10g470 . 82 451 CBL-interacting serine-threonine protein kinases AT1G30270 85.4 1.0e-185 646.4
Vvi6g908 ECH 80 437 CBL-interacting serine-threonine protein kinases AT1G30270 73.1 3.7e-151 531.6
Vvi15g629 . 80 437 CBL-interacting serine-threonine protein kinases AT1G30270 71.2 1.8e-150 529.3
Vvi11g480 . 78 430 CBL-interacting serine-threonine protein kinases AT1G30270 60.2 1.1e-121 433.7
Vvi18g555 . 77 442 CBL-interacting serine-threonine protein kinases AT1G30270 54.9 1.6e-114 409.8
Vvi10g228 . 34 349 CBL-interacting serine-threonine protein kinases AT1G30270 56.0 7.1e-102 367.9
Vvi5g262 . 36 380 CBL-interacting serine-threonine protein kinases AT1G30270 52.3 1.2e-101 367.1
Vvi11g1070 . 77 437 CBL-interacting serine-threonine protein kinases AT1G30270 50.4 7.4e-91 331.3
Vvi11g480 . 1 371 CBL-interacting serine-threonine protein kinases AT5G35410 77.9 5.0e-169 590.9
Vvi18g555 . 4 377 CBL-interacting serine-threonine protein kinases AT5G35410 66.6 5.4e-147 517.7
Vvi6g908 ECH 5 372 CBL-interacting serine-threonine protein kinases AT5G35410 62.1 1.0e-129 460.3
Vvi10g470 . 11 379 CBL-interacting serine-threonine protein kinases AT5G35410 61.1 6.6e-129 457.6
Vvi15g629 . 9 372 CBL-interacting serine-threonine protein kinases AT5G35410 58.7 9.9e-125 443.7
Vvi11g1070 . 7 366 CBL-interacting serine-threonine protein kinases AT5G35410 51.1 2.5e-104 375.9
Vvi5g262 . 14 323 CBL-interacting serine-threonine protein kinases AT5G35410 52.8 1.4e-91 333.6
Vvi9g776 . 15 417 CBL-interacting serine-threonine protein kinases AT5G25110 65.7 9.5e-160 560.5
Vvi10g470 . 9 436 CBL-interacting serine-threonine protein kinases AT5G25110 51.6 3.2e-123 439.1
Vvi15g629 . 7 429 CBL-interacting serine-threonine protein kinases AT5G25110 50.5 9.9e-117 417.5
Vvi6g908 ECH 12 434 CBL-interacting serine-threonine protein kinases AT5G25110 50.1 1.9e-115 413.3
Vvi13g140 ECH 7 230 CBL-interacting serine-threonine protein kinases AT5G25110 51.1 4.5e-77 285.8
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76079 PF00069 Pkinase 4.50E-41 CL0016 Vvi PK