Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11randomg9 | ATGGCGGATTCGGGTAAAGATTCGTGCCCGTCTTTGCTTCACGGTAAATACGAGCTGGGACGGCTTCTGGGTCACGGCACCTTCGCCAAGGTGTATCATGCCCGGAACTTGCAGACAGGGAAGAGTGTAGCGATGAAAGTGGTGGGTAAGGATAAGGTGATAAAAGTGGGGATGACGGAGCAGGTGAAGAGGGAGATATCAGTTATGAAGATGGTACAGCATCCCAATATTGTTGAGCTTCACGAAGTCATGGCCAGCAAGTCCAAGATCTACTTCGCCATGGAGCTCGTCCGCGGCGGCGAGCTTTTCTCCAAGATCTCCAAAGGGCGGTTGAGGGAGGACGTTGCTAGAGTGTACTTCCAGCAGCTGATCTCGGCGGTGGACTTTTGCCACAGCCGCGGAGTCTACCACCGGGATCTGAAGCCGGAGAATCTACTCCTCGACGAGTCTGGCAACTTGAAAGTGATTGGAAAGAATGGGTATGATGGGGCAAAGGCCGATCTGTGGTCGTGCGGTGTGATTCTGTACGTTCTTCTCGCCGGATTCTTGCCGTTTCAGGACGACAACATTGTGGCCATGTATAGGAAGATCTACAGAGGAGACTTTAAGTGTCCGCCTTGGTTTTCACCCGAATCTCGCAGACTCGTCACGAAACTCCTCGATCCAACCCCCAACACTCGAATCACCATAGCCAAGATCGTGGAATCCTCCTGGTTCAAAAAGTCGGTGCCCAAAACGATACTAACCAAAGAGGAACAAGAATTCGAGTCATTCAATTGCGGAAAAGCAAAGCAGCCGGAGACCCTGAACGCGTTCCACATCATCTCCCTATCGGAGGGGTTCGATCTGTCACCTTTGTTCGAAGAGAAGAAGAGAGAGCAAAAGGAGGAACTGAGGTTCGCGACGACGCAGCCAGCGAGCAGCGTGATATCGAAACTGGAGGAGGAAAGAGGAAGAAAAGGGAAATTAGCGATAGGAGCGGAGATATTCGCAGTGGCGCCGTCTTTCCTGGTGGTGGAGGTGAAGAAGCACCATGGTGATAGCCTGGAGTACGACCAGTTCTGCAACAAGGAGCTCCGGCCGGCTCTCAAGGACATAGTTTGGACGTCCACCCCAGCCTGA | 1122 | 52.58 | MADSGKDSCPSLLHGKYELGRLLGHGTFAKVYHARNLQTGKSVAMKVVGKDKVIKVGMTEQVKREISVMKMVQHPNIVELHEVMASKSKIYFAMELVRGGELFSKISKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDESGNLKVIGKNGYDGAKADLWSCGVILYVLLAGFLPFQDDNIVAMYRKIYRGDFKCPPWFSPESRRLVTKLLDPTPNTRITIAKIVESSWFKKSVPKTILTKEEQEFESFNCGKAKQPETLNAFHIISLSEGFDLSPLFEEKKREQKEELRFATTQPASSVISKLEEERGRKGKLAIGAEIFAVAPSFLVVEVKKHHGDSLEYDQFCNKELRPALKDIVWTSTPA* | 374 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11randomg9 | 373 | ProSiteProfiles | NAF domain profile. | 264 | 288 | IPR018451 | GO:0007165 | |
Vvi11randomg9 | 373 | CDD | CIPK_C | 270 | 364 | - | - | |
Vvi11randomg9 | 373 | Gene3D | Transferase(Phosphotransferase) domain 1 | 157 | 264 | - | - | |
Vvi11randomg9 | 373 | Gene3D | Kinase associated domain 1, KA1 | 315 | 369 | - | - | |
Vvi11randomg9 | 373 | Gene3D | Kinase associated domain 1, KA1 | 265 | 314 | - | - | |
Vvi11randomg9 | 373 | Gene3D | Transferase(Phosphotransferase) domain 1 | 10 | 156 | - | - | |
Vvi11randomg9 | 373 | SMART | serkin_6 | 17 | 239 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11randomg9 | 373 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 135 | 147 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi11randomg9 | 373 | ProSitePatterns | Protein kinases ATP-binding region signature. | 23 | 50 | IPR017441 | GO:0005524 | |
Vvi11randomg9 | 373 | ProSiteProfiles | Protein kinase domain profile. | 17 | 239 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11randomg9 | 373 | Pfam | NAF domain | 266 | 315 | IPR004041 | GO:0007165 | |
Vvi11randomg9 | 373 | Pfam | Protein kinase domain | 17 | 156 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11randomg9 | 373 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 155 | 371 | - | - | |
Vvi11randomg9 | 373 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 9 | 156 | - | - | |
Vvi11randomg9 | 373 | SUPERFAMILY | Protein kinase-like (PK-like) | 14 | 253 | IPR011009 | - | |
Vvi11randomg9 | 373 | PANTHER | - | 9 | 156 | - | - | |
Vvi11randomg9 | 373 | PANTHER | - | 155 | 371 | - | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76079 | PF00069 | Pkinase | 4.50E-41 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11randomg9 | - | K07198 | vvi:100241657 | 707.983 |