Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11randomg9 ATGGCGGATTCGGGTAAAGATTCGTGCCCGTCTTTGCTTCACGGTAAATACGAGCTGGGACGGCTTCTGGGTCACGGCACCTTCGCCAAGGTGTATCATGCCCGGAACTTGCAGACAGGGAAGAGTGTAGCGATGAAAGTGGTGGGTAAGGATAAGGTGATAAAAGTGGGGATGACGGAGCAGGTGAAGAGGGAGATATCAGTTATGAAGATGGTACAGCATCCCAATATTGTTGAGCTTCACGAAGTCATGGCCAGCAAGTCCAAGATCTACTTCGCCATGGAGCTCGTCCGCGGCGGCGAGCTTTTCTCCAAGATCTCCAAAGGGCGGTTGAGGGAGGACGTTGCTAGAGTGTACTTCCAGCAGCTGATCTCGGCGGTGGACTTTTGCCACAGCCGCGGAGTCTACCACCGGGATCTGAAGCCGGAGAATCTACTCCTCGACGAGTCTGGCAACTTGAAAGTGATTGGAAAGAATGGGTATGATGGGGCAAAGGCCGATCTGTGGTCGTGCGGTGTGATTCTGTACGTTCTTCTCGCCGGATTCTTGCCGTTTCAGGACGACAACATTGTGGCCATGTATAGGAAGATCTACAGAGGAGACTTTAAGTGTCCGCCTTGGTTTTCACCCGAATCTCGCAGACTCGTCACGAAACTCCTCGATCCAACCCCCAACACTCGAATCACCATAGCCAAGATCGTGGAATCCTCCTGGTTCAAAAAGTCGGTGCCCAAAACGATACTAACCAAAGAGGAACAAGAATTCGAGTCATTCAATTGCGGAAAAGCAAAGCAGCCGGAGACCCTGAACGCGTTCCACATCATCTCCCTATCGGAGGGGTTCGATCTGTCACCTTTGTTCGAAGAGAAGAAGAGAGAGCAAAAGGAGGAACTGAGGTTCGCGACGACGCAGCCAGCGAGCAGCGTGATATCGAAACTGGAGGAGGAAAGAGGAAGAAAAGGGAAATTAGCGATAGGAGCGGAGATATTCGCAGTGGCGCCGTCTTTCCTGGTGGTGGAGGTGAAGAAGCACCATGGTGATAGCCTGGAGTACGACCAGTTCTGCAACAAGGAGCTCCGGCCGGCTCTCAAGGACATAGTTTGGACGTCCACCCCAGCCTGA 1122 52.58 MADSGKDSCPSLLHGKYELGRLLGHGTFAKVYHARNLQTGKSVAMKVVGKDKVIKVGMTEQVKREISVMKMVQHPNIVELHEVMASKSKIYFAMELVRGGELFSKISKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDESGNLKVIGKNGYDGAKADLWSCGVILYVLLAGFLPFQDDNIVAMYRKIYRGDFKCPPWFSPESRRLVTKLLDPTPNTRITIAKIVESSWFKKSVPKTILTKEEQEFESFNCGKAKQPETLNAFHIISLSEGFDLSPLFEEKKREQKEELRFATTQPASSVISKLEEERGRKGKLAIGAEIFAVAPSFLVVEVKKHHGDSLEYDQFCNKELRPALKDIVWTSTPA* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11randomg9 373 ProSiteProfiles NAF domain profile. 264 288 IPR018451 GO:0007165
Vvi11randomg9 373 CDD CIPK_C 270 364 - -
Vvi11randomg9 373 Gene3D Transferase(Phosphotransferase) domain 1 157 264 - -
Vvi11randomg9 373 Gene3D Kinase associated domain 1, KA1 315 369 - -
Vvi11randomg9 373 Gene3D Kinase associated domain 1, KA1 265 314 - -
Vvi11randomg9 373 Gene3D Transferase(Phosphotransferase) domain 1 10 156 - -
Vvi11randomg9 373 SMART serkin_6 17 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11randomg9 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Vvi11randomg9 373 ProSitePatterns Protein kinases ATP-binding region signature. 23 50 IPR017441 GO:0005524
Vvi11randomg9 373 ProSiteProfiles Protein kinase domain profile. 17 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11randomg9 373 Pfam NAF domain 266 315 IPR004041 GO:0007165
Vvi11randomg9 373 Pfam Protein kinase domain 17 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11randomg9 373 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 155 371 - -
Vvi11randomg9 373 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 9 156 - -
Vvi11randomg9 373 SUPERFAMILY Protein kinase-like (PK-like) 14 253 IPR011009 -
Vvi11randomg9 373 PANTHER - 9 156 - -
Vvi11randomg9 373 PANTHER - 155 371 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76079 PF00069 Pkinase 4.50E-41 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11randomg9 - K07198 vvi:100241657 707.983