Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1126 ATGGATTTGCCTTCTCATTTCCTAGCAATTGCAGGGCTTATTCTGGGGTTGGTGTTATGGTATAATCACTGGAGAGGTAAGACTCTTACTCACAAGAGTAAGGGCATGTCCCCCCCGGAGCCCTCCGGTGCCTGGCCATTTGTAGGTCACCTGCACCTACTACATGGCAAAGTCCCAGTTTTCCGAACCCTTGGAGCCATGGCTGACAAGGTTGGTCCTGTGTTTGTGATCCGGCTTGGAATGTACCGAACACTTGTGGTGAGTAATCGTGAGGCTGCTAAAGAATGCTTCACTACCAATGACAAGATTTTTGCCTCACGCCCAAATTCTAGCGCAGCCAAGATCCTAGGCTACAACTATGCCGCATTTGCCTTTGCTCCTCATGGACCTTATTGGCGTGAGATGCGGAAGCTATCCATGCTAGAAATTCTCTCCACCCGTCGCCTCGGTGACTTGATGCATGTGCAGGTTTCGGAATTGCATGCTGGCATTAAAGATTTGTACATACTTGGCAAAGATAACAACTGGGTGAATCCAAAAAAGGTGGTGATAAGTGAGTGGTTTGAACACCTGACCTTTAATGTAGTCCTGAGGATGGTTGCGGGGAAGAGATATTTTAACAATGTCGTCCATGGGGGTGAGGAAGCAAGGTCTGCTATAGCAGCAATTAAGAAAGTCCTGCTTCTAGTTGGGGCCTCTGTGGCATCAGATGTGATCCCATTTCTTGAGTGGGTGGATTTACAAGGCCATTTGTCCTCTATGAAACTTGTTGCAAAGGAAATGGACTCACTTATTGAAAGCTGGGTAAAAGAACATACAGGGAGGCTCAACAGTGAGGCCAGCAGTAGTCTGGACTTCATAGACATCATGCTAACCAAGCTCAAAGATGCTTCCCTGTTTGGCTACTCGCGCGAGACTATTATCAAGGCAACAGTACTGACCATGATCGTGGCGGGCTCTGACACCACTTCTCTTACCTCTACATGGCTCCTGTCCGCATTGTTGAACAATAAACATGTTATGAAGCATGCTCAGGAAGAGCTAGACTTAAAAGTTGGTAGAGACAGGTGGGTGGAACAATCAGATATCCAGAACCTAGTTTACATTAAGGCTATTGTTAAGGAAACCCTAAGGCTATACACAACATTTCCCCTATTAGTACCACACGAGGCAATGGAAGACTGTCATGTTGGTGGGTATCACATTTCCAAAGGCACCCGCTTGCTAGTCAATGCATGGAAGTTGCACCGAGATCCTGCTGTTTGGTCTAACCCTGAAGAGTTTCAGCCAGAGAGGTTTTTGACAAGCCATGCAAATGTAGATGTGTTTGGCCAGCATTTTGAGTTAATCCCATTTGGTTCTGGTAGAAGATCTTGCCCAGGACTCAATATGGGCTTACAGATGTTACACTTGACAATTGCTCGGTTGCTTCAAGGATTTGACATGACTAAACCATCAAATTCTCCGGTGGACATGACAGAAGGGATAACAATTAAGAAGCTCGTGCCTCTAGCTGGGGCCTTTGTGGCATCAGATCTGATCCCATTTCTTGAATGGGTGGATTTACAAGGCCATTTGTCCTCTATGAAACAAGTTGCAAAGGAAATGGACTCAGTTCTAGAAAGCTGGGTTGAAGAACATACAGGGAGGCTCAACACTGAGGCCAGCAGTAGGCAGGACTTCATAGACATCATGCTAACCAAGCTCAAAGACGCTTCCCTGTTTGGCTACTCGCGCGAGACTATTATCAAAGCAACAGTACTAATTTTGATCGTGGTGGGCTCTGACACCACTTCTATTACCTCTACATGGCTCCTGTCTGCATTGTTGAACAATAGACATGTTATGAAGCATGCTCAGGAAGAGCTAGACTTAAAAGTTGGTCGAGATAGATGGGTGGAACAATCAGATATCCAGAACCTAGTTTACCTTAAGGCTATTGTTAAGGAAACACTAAGGCTATGCCCAGCAATTCCCCTATTAGTACCACTCGAGGCAATGGAAGACTATCATGTTGGGTATCACAGCAATTCCCCTGGGTATCACATTCCCAAAGGCACCCGCTTGCTATCTCATTTCTTACTTTGGAATGTTCATGTATTATTCATCTCATTATATGCAAACAGTTCTTATTTAATAAAGAAATTCCACGGGGTAGGACATGGGATTGGAAGCTCAATCTGA 2184 45.42 MDLPSHFLAIAGLILGLVLWYNHWRGKTLTHKSKGMSPPEPSGAWPFVGHLHLLHGKVPVFRTLGAMADKVGPVFVIRLGMYRTLVVSNREAAKECFTTNDKIFASRPNSSAAKILGYNYAAFAFAPHGPYWREMRKLSMLEILSTRRLGDLMHVQVSELHAGIKDLYILGKDNNWVNPKKVVISEWFEHLTFNVVLRMVAGKRYFNNVVHGGEEARSAIAAIKKVLLLVGASVASDVIPFLEWVDLQGHLSSMKLVAKEMDSLIESWVKEHTGRLNSEASSSLDFIDIMLTKLKDASLFGYSRETIIKATVLTMIVAGSDTTSLTSTWLLSALLNNKHVMKHAQEELDLKVGRDRWVEQSDIQNLVYIKAIVKETLRLYTTFPLLVPHEAMEDCHVGGYHISKGTRLLVNAWKLHRDPAVWSNPEEFQPERFLTSHANVDVFGQHFELIPFGSGRRSCPGLNMGLQMLHLTIARLLQGFDMTKPSNSPVDMTEGITIKKLVPLAGAFVASDLIPFLEWVDLQGHLSSMKQVAKEMDSVLESWVEEHTGRLNTEASSRQDFIDIMLTKLKDASLFGYSRETIIKATVLILIVVGSDTTSITSTWLLSALLNNRHVMKHAQEELDLKVGRDRWVEQSDIQNLVYLKAIVKETLRLCPAIPLLVPLEAMEDYHVGYHSNSPGYHIPKGTRLLSHFLLWNVHVLFISLYANSSYLIKKFHGVGHGIGSSI* 728
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 20002493 20011409 - Vvi12g1126 Vvi12g1126 773649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1126 727 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g1126 727 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g1126 727 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g1126 727 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g1126 727 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g1126 727 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g1126 727 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g1126 727 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g1126 727 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g1126 727 SUPERFAMILY Cytochrome P450 38 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g1126 727 PANTHER CYTOCHROME P450 82C3-RELATED 14 503 - -
Vvi12g1126 727 PANTHER CYTOCHROME P450 82C3-RELATED 497 692 - -
Vvi12g1126 727 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Vvi12g1126 727 PANTHER CYTOCHROME P450 FAMILY PROTEIN 14 503 - -
Vvi12g1126 727 PANTHER CYTOCHROME P450 FAMILY PROTEIN 497 692 - -
Vvi12g1126 727 SUPERFAMILY Cytochrome P450 501 693 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g1126 727 Pfam Cytochrome P450 38 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g1126 727 Pfam Cytochrome P450 512 690 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g1126 727 Gene3D Cytochrome P450 501 701 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g1126 727 Gene3D Cytochrome P450 28 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g1126 727 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g1126 727 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g1126 727 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1126 - - vvi:100252572 984.171