Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi12g1175 | ATGGCTCTGGTCTTGCATGCAGGGAAAACGAACAAAAATGCTTACAAGACACTCATTGCTGCGGAGTACAGCGGTATCAAAGTTGAACTGGTTCAGAACTTTGAGATGGGCGTCTCCAACAAGACTCCCGAGTTCCTTAAGATGAACCCTATCGGGAAGGTTCCCGTGTTGGAAACACCTGATGGTCCTGTATTTGAGAGCAATGCCATAGCGCGTTACGTCACTCGATTGAAGGCTGACAACCCCCTTTATGGCTCTTCTCCAATTGAATATGGCCACATTGAGCAGTGGATTGATTTTGCATCATTGGAGATTGATGCTAATATTGGGCATTGGTTTAGACCAAGGATTGGACGTGCTGTATACCTTCCACCGTTTGAGGAGGCTGCAATTGCTGCATTGAAGAGAGCATTAGGTGCTTTGAACACACATCTTGCTTCAAACACTTTCCTGGTGGGGCATTCTCTTTACCTCGGAGTTCCCTCATGTTGA | 492 | 46.54 | MALVLHAGKTNKNAYKTLIAAEYSGIKVELVQNFEMGVSNKTPEFLKMNPIGKVPVLETPDGPVFESNAIARYVTRLKADNPLYGSSPIEYGHIEQWIDFASLEIDANIGHWFRPRIGRAVYLPPFEEAAIAALKRALGALNTHLASNTFLVGHSLYLGVPSC* | 164 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 20939460 | 20942142 | - | Vvi12g1175 | Vvi12g1175 | 773698 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi12g1175 | 163 | Pfam | Glutathione S-transferase, N-terminal domain | 9 | 75 | IPR004045 | - | |
Vvi12g1175 | 163 | Gene3D | Glutaredoxin | 1 | 74 | - | - | |
Vvi12g1175 | 163 | SFLD | Glutathione Transferase (cytosolic) | 4 | 156 | IPR040079 | - | |
Vvi12g1175 | 163 | PANTHER | - | 1 | 158 | - | - | |
Vvi12g1175 | 163 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 87 | 163 | IPR010987 | - | |
Vvi12g1175 | 163 | PANTHER | ELONGATION FACTOR 1-GAMMA 1-RELATED | 1 | 158 | IPR044628 | GO:0004364 | |
Vvi12g1175 | 163 | SUPERFAMILY | GST C-terminal domain-like | 80 | 156 | IPR036282 | - | |
Vvi12g1175 | 163 | CDD | GST_N_EF1Bgamma | 3 | 77 | - | - | |
Vvi12g1175 | 163 | SFLD | Main (cytGST) | 4 | 156 | - | - | |
Vvi12g1175 | 163 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 82 | IPR004045 | - | |
Vvi12g1175 | 163 | Gene3D | - | 80 | 158 | - | - | |
Vvi12g1175 | 163 | SUPERFAMILY | Thioredoxin-like | 2 | 85 | IPR036249 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi12g1175 | K03233 | - | vvi:100264325 | 307.76 |