Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1175 ATGGCTCTGGTCTTGCATGCAGGGAAAACGAACAAAAATGCTTACAAGACACTCATTGCTGCGGAGTACAGCGGTATCAAAGTTGAACTGGTTCAGAACTTTGAGATGGGCGTCTCCAACAAGACTCCCGAGTTCCTTAAGATGAACCCTATCGGGAAGGTTCCCGTGTTGGAAACACCTGATGGTCCTGTATTTGAGAGCAATGCCATAGCGCGTTACGTCACTCGATTGAAGGCTGACAACCCCCTTTATGGCTCTTCTCCAATTGAATATGGCCACATTGAGCAGTGGATTGATTTTGCATCATTGGAGATTGATGCTAATATTGGGCATTGGTTTAGACCAAGGATTGGACGTGCTGTATACCTTCCACCGTTTGAGGAGGCTGCAATTGCTGCATTGAAGAGAGCATTAGGTGCTTTGAACACACATCTTGCTTCAAACACTTTCCTGGTGGGGCATTCTCTTTACCTCGGAGTTCCCTCATGTTGA 492 46.54 MALVLHAGKTNKNAYKTLIAAEYSGIKVELVQNFEMGVSNKTPEFLKMNPIGKVPVLETPDGPVFESNAIARYVTRLKADNPLYGSSPIEYGHIEQWIDFASLEIDANIGHWFRPRIGRAVYLPPFEEAAIAALKRALGALNTHLASNTFLVGHSLYLGVPSC* 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 20939460 20942142 - Vvi12g1175 Vvi12g1175 773698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1175 163 Pfam Glutathione S-transferase, N-terminal domain 9 75 IPR004045 -
Vvi12g1175 163 Gene3D Glutaredoxin 1 74 - -
Vvi12g1175 163 SFLD Glutathione Transferase (cytosolic) 4 156 IPR040079 -
Vvi12g1175 163 PANTHER - 1 158 - -
Vvi12g1175 163 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 163 IPR010987 -
Vvi12g1175 163 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 158 IPR044628 GO:0004364
Vvi12g1175 163 SUPERFAMILY GST C-terminal domain-like 80 156 IPR036282 -
Vvi12g1175 163 CDD GST_N_EF1Bgamma 3 77 - -
Vvi12g1175 163 SFLD Main (cytGST) 4 156 - -
Vvi12g1175 163 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Vvi12g1175 163 Gene3D - 80 158 - -
Vvi12g1175 163 SUPERFAMILY Thioredoxin-like 2 85 IPR036249 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1175 K03233 - vvi:100264325 307.76