Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1250 ATGGCTGAATTGGAAGCGGATAAGAAGAAGGAAGCTGTGTGTGTGACAGGAGCCAATGGCTTCATTGGGTCTTGGTTGGTTCGGACCCTGGTGGAGCATGGCTACACCACCATCCACGCCTCCATCTTCCCCGGCTCCGACGCCTCGCACCTCTTCTCTCTCCCGGGCGCCGCCGCCGCCGATATCGTCGTGTACGAGGCTGACCTCCTCGACGCCGAAGCGGTGGCCAGGGCGGTGGAGGGCTGCACCGGGGTGTTCCACGTGGCGTCCCCCTGCAGTCTCGAGGACCCTAAGGATCCTGAGAAGGAGCTGCTAATGCCGGCGGTGGAAGGGACAAAGAATGTTCTGGAAGCTGCTAGAAGGTTCCAGGTGAGGCGCGTGGTGCTCACCTCATCCATTTCGGCCTTGGTCCCCAACCCCTCTTGGCCCCCCAACATTCCCTTCAACGAGACCTCCTGGACTGACCTCCATTACTGCAAATCTCGCCAGAAATGGTATCCAGTGTCGAAGACACTAGCAGAAAAAGCAGCATGGGAATTTGCAGGGAAACATGGAATAGATGTAGTGGCTATCCATCCAGCCACATGTCTCGGCGAACTGTTACAACCAAGATTGAATGCGAGCTGTGCTGTATTGCAGCAGCTGCTCGAAGGATCAACAGAAACTCAGGAATATCACTGGCTGGGGGCTGTGCATGTTAAAGATGTAGCGAAGGCACAAGTATTGCTATTTGAGACTCCTGCTGCTTCTGGTAGATATCTCTGCACCGATGGTATCTATCAGTTTGCCGATTTTGCTGAGAGAGTCTCCAAACTCTTCCCAGAGTTTCCAGTTCACAGATTTATTGGAGAAACCCAACCAGGCATGATGGCTTGCAAAGATGCGGCAAAAAGATTGATAGATCTGGGACTAGTCTTTACACCAGTTGAAGATGCTGTTAAGGATGCGGTGGAGAGCTTGAAAGCAAAAGGCTTCCTGGAGCAGGGAAAGAAGCAATCTTAG 1002 53.29 MAELEADKKKEAVCVTGANGFIGSWLVRTLVEHGYTTIHASIFPGSDASHLFSLPGAAAADIVVYEADLLDAEAVARAVEGCTGVFHVASPCSLEDPKDPEKELLMPAVEGTKNVLEAARRFQVRRVVLTSSISALVPNPSWPPNIPFNETSWTDLHYCKSRQKWYPVSKTLAEKAAWEFAGKHGIDVVAIHPATCLGELLQPRLNASCAVLQQLLEGSTETQEYHWLGAVHVKDVAKAQVLLFETPAASGRYLCTDGIYQFADFAERVSKLFPEFPVHRFIGETQPGMMACKDAAKRLIDLGLVFTPVEDAVKDAVESLKAKGFLEQGKKQS* 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 22397722 22403254 + Vvi12g1250 Vvi12g1250 773773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1250 333 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 11 316 - -
Vvi12g1250 333 Gene3D - 3 333 - -
Vvi12g1250 333 CDD FR_SDR_e 13 304 - -
Vvi12g1250 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 320 IPR036291 -
Vvi12g1250 333 Pfam NAD dependent epimerase/dehydratase family 13 249 IPR001509 -
Vvi12g1250 333 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 316 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1250 - - vvi:100245372 674.47