Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1253 ATGACAAGAAAAAGAAAAAATAAATTAATTTGTATGGAGGAGAGCAAGCTGAAGCTGTATTCATCCTGGCGGAGTTCCAGCTCCTGCCGTGTCCGAATTGCCCTCAACTTGAAAGGTCTGAAATACGAGTACAAAGCAGTGAATTTGTTGAAAGGAGAGCAGTTCAGTCCAGAGTTTTCAAAGCTCAGTCCTCTCAATTATGTGCCCACGTTGGTGGATGGGGACATGATAGTTGTTGAATCTTTTGCTATTCTGATGTATCTGGAAGACAAGTATCCTCAACATCCATTGTTGCCTCCTGATCTAAAGAAAAGAGCTATCAATTACCAGGCTGCTAGTTTTGTTTCCTCAAGCATACAGCCACTTCAGAATTTGGTTGAACAGAAATATATTGCGGAAGAGGTTGGTAGTGATGAGAAGCTCTCATGGGTCAAACATCACATGGAAAAAGGCTTTGCAGCACTGGAGAAGCTCTTAAAAGACCATGCTGCAAAATATGCAAGTGGAGATGAAGTTTTCCTGGCTGACTTATTTCTAGCGCCCCAGATTCATGATGCGCTTACAAGGTTCAATGTCGACATGACTCAATTCTCTCTTCTATTGAGGTTGAATGACGCATACAATGAATTGCCAGCATTCCAAGATGCCATGCCTGAAAAACAGCCCGATTACCTTCAATCATAG 684 42.11 MTRKRKNKLICMEESKLKLYSSWRSSSSCRVRIALNLKGLKYEYKAVNLLKGEQFSPEFSKLSPLNYVPTLVDGDMIVVESFAILMYLEDKYPQHPLLPPDLKKRAINYQAASFVSSSIQPLQNLVEQKYIAEEVGSDEKLSWVKHHMEKGFAALEKLLKDHAAKYASGDEVFLADLFLAPQIHDALTRFNVDMTQFSLLLRLNDAYNELPAFQDAMPEKQPDYLQS* 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 22457881 22461088 - Vvi12g1253 Vvi12g1253 773776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1253 227 Pfam Glutathione S-transferase, N-terminal domain 16 89 IPR004045 -
Vvi12g1253 227 Pfam Glutathione S-transferase, C-terminal domain 137 212 IPR004046 -
Vvi12g1253 227 PANTHER S-CRYSTALLIN-RELATED 12 224 - -
Vvi12g1253 227 SFLD Main (cytGST) 17 189 - -
Vvi12g1253 227 SFLD Glutathione Transferase (cytosolic) 17 189 IPR040079 -
Vvi12g1253 227 SUPERFAMILY Thioredoxin-like 11 99 IPR036249 -
Vvi12g1253 227 PANTHER MALEYLACETOACETATE ISOMERASE 12 224 - -
Vvi12g1253 227 Gene3D - 99 226 - -
Vvi12g1253 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 101 226 IPR010987 -
Vvi12g1253 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 15 96 IPR004045 -
Vvi12g1253 227 CDD GST_C_Zeta 102 221 IPR034330 -
Vvi12g1253 227 Gene3D Glutaredoxin 14 98 - -
Vvi12g1253 227 SUPERFAMILY GST C-terminal domain-like 96 223 IPR036282 -
Vvi12g1253 227 TIGRFAM maiA: maleylacetoacetate isomerase 18 224 IPR005955 GO:0003824|GO:0005737|GO:0009072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1253 K01800 - vvi:100257402 417.927