Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1254 ATGAAGAAGACGAAGGATTTCAAAGGGTACGAACTTCCCCACAAACCCAACTTGTTAAAACCTCCACACCACCAGCAAAACCAGATCAAACTCCCATCTCTGCAAGCATCCCATATTTTTCTCCACAATGTGTTTACTTCCCTCACTTTTCCACACCAAAGGTTTCCCAAGAAAACCCAGCCCGCAAAACCCCTAAAACAGCAAGAAAATGCAGCTATAAAGAATACAGATCCAGATCAACTCAGCCAAAACCCACACTCAAGGAAGAAAGAGAAAATACCCATCAACAAAAACGAACAAGCAAACAAACAAAAAATTCACCAAAACCCCTCAACATTATCCAAAAACAACACACAAAACCATAGGGAAGAGGTCATACTAGTTTCAGAGAAGAACAACACTCTTATTACAACAGTGAGCAGTGAGCGGTGTTCTGTGTTTTTCCATCAAACTGCAACAATGGAGGAGACTCAGCTGAAGCTGTATTCTTATTGGCGGAGTTCCTGCTCCTGTCGTGTTCGAATTGCCCTCAACTTGAAACGGCTGAAATACGAGTACAAAGCAGTGAACTTGGTGAAAGGAGAGCAGTTCAGTCCAGAGTTTTCAAAGCTGAATCCTCTCAATTTTGTGCCGGCACTAGTGGATGGGGACATAGTAGTTGCTGATTCTTTTGCCATTTTGATGTATTTGGAAGAGAAGTATCCTCAACATCCATTGTTGCCTCAGGATCTACATAAAAGAGCTATCAATTACCAGGCTGCCAATATTGTTTCTGCAAACATACAGCCACTTCAGAATTTGGTTGTACTGAAATATATTGAGGAAAAGTGTGGTAGTGGTGAGAGGCTCACATGGGTCAAACATCATATTGAAAAAGGCTTTGCAGCCTTGGAGAAGCTATTAAAAGATCATGCTGGAAAATATGCGACTGGAGATGAAGTTTTCCTGGCTGATTTGTTTCTAGCACCCCAGATTCATGCTGCACTTAAACGGTTCAAAATGGACATGACTGAATTCCCCCTTTTATTAAGGTTGAATGACGCATACAATGAATTGCCAGCATTCCAAGATGCTATGCCAGAAAAACAGCCCGACTACGTCCCATCATAG 1110 41.89 MKKTKDFKGYELPHKPNLLKPPHHQQNQIKLPSLQASHIFLHNVFTSLTFPHQRFPKKTQPAKPLKQQENAAIKNTDPDQLSQNPHSRKKEKIPINKNEQANKQKIHQNPSTLSKNNTQNHREEVILVSEKNNTLITTVSSERCSVFFHQTATMEETQLKLYSYWRSSCSCRVRIALNLKRLKYEYKAVNLVKGEQFSPEFSKLNPLNFVPALVDGDIVVADSFAILMYLEEKYPQHPLLPQDLHKRAINYQAANIVSANIQPLQNLVVLKYIEEKCGSGERLTWVKHHIEKGFAALEKLLKDHAGKYATGDEVFLADLFLAPQIHAALKRFKMDMTEFPLLLRLNDAYNELPAFQDAMPEKQPDYVPS* 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 22461569 22477993 - Vvi12g1254 Vvi12g1254 773777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1254 369 Gene3D Glutaredoxin 156 241 - -
Vvi12g1254 369 MobiDBLite consensus disorder prediction 99 119 - -
Vvi12g1254 369 TIGRFAM maiA: maleylacetoacetate isomerase 160 366 IPR005955 GO:0003824|GO:0005737|GO:0009072
Vvi12g1254 369 CDD GST_N_Zeta 159 231 IPR034333 -
Vvi12g1254 369 CDD GST_C_Zeta 244 363 IPR034330 -
Vvi12g1254 369 SUPERFAMILY Thioredoxin-like 149 242 IPR036249 -
Vvi12g1254 369 SUPERFAMILY GST C-terminal domain-like 238 366 IPR036282 -
Vvi12g1254 369 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 157 238 IPR004045 -
Vvi12g1254 369 Pfam Glutathione S-transferase, N-terminal domain 158 231 IPR004045 -
Vvi12g1254 369 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 152 366 - -
Vvi12g1254 369 MobiDBLite consensus disorder prediction 54 119 - -
Vvi12g1254 369 Gene3D - 242 368 - -
Vvi12g1254 369 SFLD Main (cytGST) 159 344 - -
Vvi12g1254 369 PANTHER MALEYLACETOACETATE ISOMERASE 152 366 - -
Vvi12g1254 369 MobiDBLite consensus disorder prediction 63 82 - -
Vvi12g1254 369 Pfam Glutathione S-transferase, C-terminal domain 276 355 IPR004046 -
Vvi12g1254 369 MobiDBLite consensus disorder prediction 1 27 - -
Vvi12g1254 369 MobiDBLite consensus disorder prediction 83 98 - -
Vvi12g1254 369 SFLD Glutathione Transferase (cytosolic) 159 344 IPR040079 -
Vvi12g1254 369 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 243 368 IPR010987 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1254 K01800 - vvi:100252270 438.343